Search results: The pahtway p4399 has 170 genes in the original annotation. Currently, there are 97 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
83860TAF3TAF140 | TAFII-140 | TAFII140TATA-box binding protein associated factor 310p15.1CV:PGCnp
DMG:Jaffe_2016
9044BTAF1MOT1 | TAF(II)170 | TAF172 | TAFII170B-TFIID TATA-box binding protein associated factor 110q22-q23CV:GWASdb
CV:PGCnp
340665CYP26C1FFDD4cytochrome P450 family 26 subfamily C member 110q23.33CV:PGCnp
GO_Annotation
PMID:cooccur
3983ABLIM1ABLIM | LIMAB1 | LIMATIN | abLIM-1actin binding LIM protein 110q25CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
10570DPYSL4CRMP3 | DRP-4 | ULIP4dihydropyrimidinase like 410q26CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
154810AMOTL1JEAPangiomotin like 111q14.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
25996REXO2CGI-114 | REX2 | RFN | SFNRNA exonuclease 211q23.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
4013VWA5ABCSC-1 | BCSC1 | LOH11CR2Avon Willebrand factor A domain containing 5A11q24.1CV:PGCnp
7450VWFF8VWF | VWDvon Willebrand factor12p13.3CV:PGCnp
Expression
PMID:cooccur
3887KRT81HB1 | Hb-1 | KRTHB1 | MLN137 | ghHkb1 | hHAKB2-1keratin 8112q13CV:PGCnp
2647BLOC1S1BLOS1 | BORCS1 | GCN5L1 | MICoA | RT14biogenesis of lysosomal organelles complex 1 subunit 112q13-q14Network
PMID:cooccur
57658CALCOCO1Cocoa | PP13275 | calphoglincalcium binding and coiled-coil domain 112q13.13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
144321GLIPR1L2-GLI pathogenesis-related 1 like 212q21.2DNM:Gulsuner_2013
605BCL7ABCL7B-cell CLL/lymphoma 7A12q24.13CV:PGCnp
Expression
7637ZNF84HPF2zinc finger protein 8412q24.33DMG:Jaffe_2016
10804GJB6CX30 | DFNA3 | DFNA3B | DFNB1B | ECTD2 | ED2 | EDH | HED | HED2gap junction protein beta 613q12CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
79758DHRS12SDR40C1dehydrogenase/reductase (SDR family) member 1213q14.3DMG:Wockner_2014
85416ZIC5-Zic family member 513q32.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5018OXA1LOXA1oxidase (cytochrome c) assembly 1-like14q11.2CV:PGCnp
DNM:Guipponi_2014
GSMA_I
85446ZFHX2ZFH-5 | ZNF409zinc finger homeobox 214q11.2CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
1690COCHCOCH-5B2 | COCH5B2 | DFNA9cochlin14q11.2-q13CV:PGCnp
DEG:Sanders_2013
GSMA_I
6547SLC8A3NCX3solute carrier family 8 member A314q24.1CV:PGCnp
DMG:Nishioka_2013
ION BALANCE
2957GTF2A1TF2A1 | TFIIA | TFIIA-42 | TFIIALgeneral transcription factor IIA 114q31.1CV:GWASdb
CV:PGCnp
6447SCG57B2 | P7B2 | SGNE1 | SgVsecretogranin V15q13-q14CNV:YES
CV:PGCnp
GO_Annotation
NEUROTROPHIN SIGNALING
26108PYGO1-pygopus family PHD finger 115q21.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
54852PAQR5MPRGprogestin and adipoQ receptor family member V15q23CV:GWAScat
CV:GWASdb
CV:PGCnp
2975GTF3C1TFIIIC | TFIIIC220 | TFIIICalphageneral transcription factor IIIC subunit 116p12CV:PGCnp
GSMA_IIE
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23247KIAA0556JBTS26KIAA055616p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
Ascano FMRP targets
4502MT2AMT2metallothionein 2A16q13CV:PGCnp
PMID:cooccur
8139GANGAN1 | KLHL16gigaxonin16q24.1CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
9912ARHGAP44NPC-A-10 | RICH2Rho GTPase activating protein 4417p12CV:PGCnp
116840CNTROBLIP8 | PP1221centrobin, centrosomal BRCA2 interacting protein17p13.1CV:PGCnp
9196KCNAB3AKR6A9 | KCNA3.1B | KCNA3B | KV-BETA-3potassium voltage-gated channel subfamily A regulatory beta subunit 317p13.1CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
58485TRAPPC1BET5 | MUM2trafficking protein particle complex 117p13.1CV:PGCnp
26115TANC2ROLSA | rolstetratricopeptide repeat, ankyrin repeat and coiled-coil containing 217q23.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
29115SAP30BPHCNGP | HTRG | HTRPSAP30 binding protein17q25.1CV:PGCnp
DNM:Xu_2012
CompositeSet
124583CANT1DBQD | DBQD1 | SCAN-1 | SCAN1 | SHAPYcalcium activated nucleotidase 117q25.3CV:PGCnp
84617TUBB6HsT1601 | TUBB-5tubulin beta 6 class V18p11.21CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_TAP-PSD-95-CORE
9063PIAS2ARIP3 | DIP | MIZ | MIZ1 | PIASX | PIASX-ALPHA | PIASX-BETA | SIZ2 | ZMIZ4protein inhibitor of activated STAT 218q21.1CV:PGCnp
PMID:cooccur
5366PMAIP1APR | NOXAphorbol-12-myristate-13-acetate-induced protein 118q21.32CV:PGCnp
DMG:Jaffe_2016
4784NFIXMRSHSS | NF1A | SOTOS2nuclear factor I/X (CCAAT-binding transcription factor)19p13.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
29128UHRF1ICBP90 | Np95 | RNF106 | TDRD22 | hNP95 | hUHRF1 | huNp95ubiquitin like with PHD and ring finger domains 119p13.3CV:PGCnp
DMG:Wockner_2014
9422ZNF264-zinc finger protein 26419q13.4DMG:Jaffe_2016
84878ZBTB45ZNF499zinc finger and BTB domain containing 4519q13.43CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
140612ZFP28mkr5ZFP28 zinc finger protein19q13.43CV:PGCnp
DMG:Wockner_2014
63934ZNF667MIPU1zinc finger protein 66719q13.43CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
147948ZNF582-zinc finger protein 58219q13.43CV:PGCnp
284312ZSCAN1MZF-1 | ZNF915zinc finger and SCAN domain containing 119q13.43CV:PGCnp
DMG:Wockner_2014
7075TIE1JTK14 | TIEtyrosine kinase with immunoglobulin like and EGF like domains 11p34-p33CV:PGCnp
GO_Annotation
51441YTHDF2CAHL | HGRG8 | NY-REN-2YTH N(6)-methyladenosine RNA binding protein 21p35CV:PGCnp
5202PFDN2PFD2prefoldin subunit 21q23.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
26052DNM3Dyna IIIdynamin 31q24.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
79175ZNF343dJ734P14.5zinc finger protein 34320p13CV:PGCnp
DMG:Jaffe_2016
3420IDH3BH-IDHB | RP46isocitrate dehydrogenase 3 (NAD+) beta20p13CV:PGCnp
Expression
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
3172HNF4AFRTS4 | HNF4 | HNF4a7 | HNF4a8 | HNF4a9 | HNF4alpha | MODY | MODY1 | NR2A1 | NR2A21 | TCF | TCF14hepatocyte nuclear factor 4 alpha20q13.12CV:PGCnp
GO_Annotation
PMID:cooccur
3973LHCGRHHG | LCGR | LGR2 | LH/CG-R | LH/CGR | LHR | LHRHR | LSH-R | ULG5luteinizing hormone/choriogonadotropin receptor2p21CV:PGCnp
200634KRTCAP3KCP3 | MRV222 | PRO9898keratinocyte associated protein 32p23.3CV:PGCnp
8828NRP2NP2 | NPN2 | PRO2714 | VEGF165R2neuropilin 22q33.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
115560ZNF501ZNF | ZNF52zinc finger protein 5013p21.31CV:PGCnp
51143DYNC1LI1DNCLI1 | LIC1dynein cytoplasmic 1 light intermediate chain 13p22.3CV:GWASdb
CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
5217PFN2D3S1319E | PFLprofilin 23q25.1NetworkSTRUCTURAL PLASTICITY
CompositeSet
344758GPR149IEDA | PGR10G protein-coupled receptor 1493q25.2CV:PGCnp
80235PIGZGPI-MT-IV | PIG-Z | SMP3phosphatidylinositol glycan anchor biosynthesis class Z3q29CNV:YES
CV:PGCnp
DMG:Wockner_2014
133015PACRGLC4orf28PARK2 co-regulated like4p15.31CV:GWASdb
CV:PGCnp
53407STX18Ufe1syntaxin 184p16.3-p16.2CV:GWASdb
CV:PGCnp
2983GUCY1B3GC-S-beta-1 | GC-SB3 | GUC1B3 | GUCB3 | GUCSB3 | GUCY1B1guanylate cyclase 1, soluble, beta 34q31.3-q33CV:PGCnp
DMG:Wockner_2014
Expression
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
7097TLR2CD282 | TIL4toll like receptor 24q32CV:PGCnp
PMID:cooccur
51663ZFRSPG71 | ZFR1zinc finger RNA binding protein5p13.3CV:PGCnp
DMG:Montano_2016
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
7060THBS4TSP-4 | TSP4thrombospondin 45q13CV:PGCnp
PMID:cooccur
1393CRHBPCRF-BP | CRFBPcorticotropin releasing hormone binding protein5q13.3CV:PGCnp
PMID:cooccur
NEUROTROPHIN SIGNALING
4762NEUROG1AKA | Math4C | NEUROD3 | bHLHa6 | ngn1neurogenin 15q23-q31Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
56125PCDHB11ME2 | PCDH-BETA11protocadherin beta 115q31CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
56128PCDHB8PCDH-BETA8 | PCDH3Iprotocadherin beta 85q31CV:PGCnp
GSMA_I
56138PCDHA11CNR7 | CNRN7 | CNRS7 | CRNR7 | PCDH-ALPHA11protocadherin alpha 115q31CV:PGCnp
GO_Annotation
GSMA_I
57717PCDHB16ME1 | PCDH-BETA16 | PCDH3X | PCDHB8aprotocadherin beta 165q31CV:PGCnp
GO_Annotation
GSMA_I
9708PCDHGA8PCDH-GAMMA-A8protocadherin gamma subfamily A, 85q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
5515PPP2CAPP2Ac | PP2CA | PP2Calpha | RP-Cprotein phosphatase 2 catalytic subunit alpha5q31.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
9782MATR3ALS21 | MPD2 | VCPDMmatrin 35q31.2CV:PGCnp
DEG:Sanders_2013
GSMA_I
Network
2741GLRA1HKPX1 | STHEglycine receptor alpha 15q32CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
222584FAM83BC6orf143family with sequence similarity 83 member B6p12.1CV:PGCnp
GSMA_IIE
81578COL21A1COLA1L | FP633collagen type XXI alpha 16p12.3-p11.2|6p12.3-p11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
23113CUL9H7AP1 | PARCcullin 96p21.1CV:GWASdb
CV:PGCnp
GSMA_IIE
CompositeSet
Darnell FMRP targets
5460POU5F1OCT3 | OCT4 | OTF-3 | OTF3 | OTF4 | Oct-3 | Oct-4POU class 5 homeobox 16p21.31CV:PGCnp
GSMA_I
221496LEMD2NET25 | dJ482C21.1LEM domain containing 26p21.31CV:PGCnp
GSMA_I
9053MAP7E-MAP-115 | EMAP115microtubule associated protein 76q23.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
285800PRR18-proline rich 186q27CV:PGCnp
DEG:Zhao_2015
51142CHCHD2C7orf17 | MNRR1 | NS2TP | PARK22coiled-coil-helix-coiled-coil-helix domain containing 27p11.2CV:PGCnp
8379MAD1L1MAD1 | PIG9 | TP53I9 | TXBP181MAD1 mitotic arrest deficient-like 1 (yeast)7p22CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
LK:YES
PMID:cooccur
95681CEP41JBTS15 | TSGA14centrosomal protein 41kDa7q32CV:PGCnp
23534TNPO3IPO12 | LGMD1F | MTR10A | TRN-SR | TRN-SR2 | TRNSRtransportin 37q32.1CV:PGCnpAscano FMRP targets
835CASP2CASP-2 | ICH1 | NEDD-2 | NEDD2 | PPP1R57caspase 27q34-q35CV:PGCnp
23516SLC39A14LZT-Hs4 | NET34 | ZIP14 | cig19solute carrier family 39 member 148p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
4342MOSMSVv-mos Moloney murine sarcoma viral oncogene homolog8q11CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
51010EXOSC3CGI-102 | PCH1B | RRP40 | Rrp40p | bA3J10.7 | hRrp-40 | p10exosome component 39p11CV:PGCnp
PMID:cooccur
7010TEKCD202B | TIE-2 | TIE2 | VMCM | VMCM1TEK receptor tyrosine kinase9p21CV:PGCnp
DNM:McCarthy_2014
GO_Annotation
1993ELAVL2HEL-N1 | HELN1 | HUBELAV like neuron-specific RNA binding protein 29p21CV:GWASdb
CV:PGCnp
PMID:cooccur
81689ISCA1HBLD2 | ISA1 | hIscAiron-sulfur cluster assembly 19q21.33CV:PGCnp