Search results: The pahtway p4340 has 148 genes in the original annotation. Currently, there are 95 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
3799KIF5BHEL-S-61 | KINH | KNS | KNS1 | UKHCkinesin family member 5B10p11.22CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
GO_Annotation
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
221037JMJD1CTRIP-8 | TRIP8jumonji domain containing 1C10q21.3CV:PGCnp
DMG:Wockner_2014
7414VCLCMD1W | CMH15 | HEL114 | MV | MVCLvinculin10q22.2CV:PGCnp
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
3433IFIT2G10P2 | GARG-39 | IFI-54 | IFI-54K | IFI54 | IFIT-2 | ISG-54 K | ISG-54K | ISG54 | P54 | cig42interferon induced protein with tetratricopeptide repeats 210q23.31CV:PGCnp
PMID:cooccur
3434IFIT1C56 | G10P1 | IFI-56 | IFI-56K | IFI56 | IFIT-1 | IFNAI1 | ISG56 | P56 | RNM561interferon induced protein with tetratricopeptide repeats 110q23.31CV:PGCnp
PMID:cooccur
9531BAG3BAG-3 | BIS | CAIR-1 | MFM6BCL2 associated athanogene 310q25.2-q26.2CV:GWASdb
CV:PGCnp
PMID:cooccur
CompositeSet
6764ST5DENND2B | HTS1 | p126suppression of tumorigenicity 511p15CV:PGCnp
DMG:Wockner_2014
9646CTR9SH2BP1 | TSBP | p150 | p150TSPCTR9 homolog, Paf1/RNA polymerase II complex component11p15.3CV:GWAScat
CV:GWASdb
CV:PGCnp
Ascano FMRP targets
55048VPS37C-VPS37C, ESCRT-I subunit11q12.2CV:GWASdb
CV:PGCnp
55291PPP6R3C11orf23 | PP6R3 | SAP190 | SAPL | SAPLa | SAPS3protein phosphatase 6 regulatory subunit 311q13CV:GWASdb
CV:PGCnp
51503CWC15AD002 | C11orf5 | Cwf15 | HSPC148 | ORF5CWC15 spliceosome-associated protein11q21CV:PGCnp
DMG:Jaffe_2016
3312HSPA8HEL-33 | HEL-S-72p | HSC54 | HSC70 | HSC71 | HSP71 | HSP73 | HSPA10 | LAP-1 | LAP1 | NIP71heat shock protein family A (Hsp70) member 811q24.1CV:PGCnp
DNM:Fromer_2014
Expression
GSMA_I
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
58516FAM60AC12orf14 | L4 | TERAfamily with sequence similarity 60 member A12p11CV:PGCnp
DMG:Montano_2016
3845KRASC-K-RAS | CFC2 | K-RAS2A | K-RAS2B | K-RAS4A | K-RAS4B | KI-RAS | KRAS1 | KRAS2 | NS | NS3 | RALD | RASK2Kirsten rat sarcoma viral oncogene homolog12p12.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.humanPSP
CompositeSet
5763PTMSParaTparathymosin12p13CV:PGCnp
PMID:cooccur
10024TROAPTASTINtrophinin associated protein12q13.12DMG:Jaffe_2016
11163NUDT4DIPP2 | DIPP2alpha | DIPP2beta | HDCMB47Pnudix hydrolase 412q21CV:PGCnp
79023NUP37p37nucleoporin 37kDa12q23.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
4842NOS1IHPS1 | N-NOS | NC-NOS | NOS | bNOS | nNOSnitric oxide synthase 112q24.22Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
5901RANARA24 | Gsp1 | TC4RAN, member RAS oncogene family12q24.3CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
8848TSC22D1Ptg-2 | TGFB1I4 | TSC22TSC22 domain family member 113q14CV:PGCnp
DMG:Nishioka_2013
Network
CompositeSet
Darnell FMRP targets
7528YY1DELTA | INO80S | NF-E1 | UCRBP | YIN-YANG-1YY1 transcription factor14qCV:PGCnp
Network
PMID:cooccur
1033CDKN3CDI1 | CIP2 | KAP | KAP1cyclin-dependent kinase inhibitor 314q22CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Kranz_2015
PMID:cooccur
3091HIF1AHIF-1-alpha | HIF-1A | HIF-1alpha | HIF1 | HIF1-ALPHA | MOP1 | PASD8 | bHLHe78hypoxia inducible factor 1 alpha subunit14q23.2CV:PGCnp
DNM:Gulsuner_2013
PMID:cooccur
5663PSEN1AD3 | FAD | PS-1 | PS1 | S182presenilin 114q24.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
NEUROTROPHIN SIGNALING
10073SNUPNKPNBL | RNUT1 | Snurportin1snurportin 115q24.2DMG:Wockner_2014Ascano FMRP targets
11214AKAP13AKAP-13 | AKAP-Lbc | ARHGEF13 | BRX | HA-3 | Ht31 | LBC | PRKA13 | PROTO-LB | PROTO-LBC | c-lbc | p47A-kinase anchoring protein 1315q25.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
9055PRC1ASE1protein regulator of cytokinesis 115q26.1CV:PGCnp
123811FOPNLC16orf63 | FOR20 | PHSECRG2FGFR1OP N-terminal like16p13.11CNV:YES
CV:PGCnp
GSMA_IIE
28955DEXIMYLEDexi homolog (mouse)16p13.13CV:PGCnp
DMG:Nishioka_2013
4302MLLT6AF17myeloid/lymphoid or mixed-lineage leukemia; translocated to, 617q21CV:PGCnp
147179WIPF2WICH | WIREWAS/WASL interacting protein family member 217q21.2CV:PGCnp
3837KPNB1IMB1 | IPO1 | IPOB | Impnb | NTF97karyopherin subunit beta 117q21.32DMG:Nishioka_2013
DMG:Wockner_2014
Expression
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
3607FOXK2ILF | ILF-1 | ILF1forkhead box K217q25CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
7572ZNF24KOX17 | RSG-A | ZNF191 | ZSCAN3 | Zfp191zinc finger protein 2418q12CV:PGCnp
5864RAB3A-RAB3A, member RAS oncogene family19p13.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
4782NFICCTF | CTF5 | NF-I | NFInuclear factor I/C (CCAAT-binding transcription factor)19p13.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
10362HMG20BBRAF25 | BRAF35 | HMGX2 | HMGXB2 | PP7706 | SMARCE1r | SOXL | pp8857high mobility group 20B19p13.3DMG:Jaffe_2016Chromatin Remodeling Genes
23521RPL13AL13A | TSTA1ribosomal protein L13a19q13.3CV:PGCnpG2Cdb.humanNRC
G2Cdb.humanPSP
4774NFIACTF | NF-I/A | NF1-A | NFI-A | NFI-Lnuclear factor I/A1p31.3-p31.2CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
998CDC42CDC42Hs | G25K | TKScell division cycle 421p36.1CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
2782GNB1-G protein subunit beta 11p36.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Network
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
10712FAM189BC1orf2 | COTE1family with sequence similarity 189 member B1q21CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GSMA_I
GSMA_IIA
8349HIST2H2BEGL105 | H2B | H2B.1 | H2BFQ | H2BGL105 | H2BQhistone cluster 2, H2be1q21.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
10765KDM5BCT31 | JARID1B | PLU-1 | PLU1 | PPP1R98 | PUT1 | RBBP2H1A | RBP2-H1lysine demethylase 5B1q32.1CV:GWASdb
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
29097CNIH4CNIH-4 | HSPC163cornichon family AMPA receptor auxiliary protein 41q42.11CV:PGCnp
Expression
7150TOP1TOPItopoisomerase (DNA) I20q12-q13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Ascano FMRP targets
57169ZNFX1-zinc finger, NFX1-type containing 120q13.13CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
56894AGPAT3LPAAT-GAMMA1 | LPAAT31-acylglycerol-3-phosphate O-acyltransferase 321q22.3CV:PGCnpCompositeSet
Darnell FMRP targets
10766TOB2TOB4 | TOBL | TROB2transducer of ERBB2, 222q13.2CV:PGCnp
DEG:Zhao_2015
PMID:cooccur
9801MRPL19L19mt | MRP-L15 | MRP-L19 | MRPL15 | RLX1 | RPML15mitochondrial ribosomal protein L192p11.1-q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
84168ANTXR1ATR | GAPO | TEM8anthrax toxin receptor 12p13.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
3267AGFG1HRB | RAB | RIPArfGAP with FG repeats 12q36.3CV:PGCnp
55802DCP1AHSA275986 | Nbla00360 | SMAD4IP1 | SMIFdecapping mRNA 1A3p21.1CV:PGCnp
DMG:Jaffe_2016
Network
375341C3orf62-chromosome 3 open reading frame 623p21.31CV:PGCnp
DMG:Wockner_2014
348801LNP1NP3leukemia NUP98 fusion partner 13q12.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
2624GATA2DCML | IMD21 | MONOMAC | NFE1BGATA binding protein 23q21.3CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
PMID:cooccur
10274STAG1SA1 | SCC3Astromal antigen 13q22.3CV:GWAScat
CV:PGC128
CV:PGCnp
DNM:Xu_2012
CompositeSet
8087FXR1FXR1PFMR1 autosomal homolog 13q28CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
60312AFAP1AFAP | AFAP-110 | AFAP110actin filament associated protein 14p16CV:PGCnp
DMG:Wockner_2014
55646LYARZC2HC2 | ZLYARLy1 antibody reactive4p16.3CV:PGCnp
1977EIF4EAUTS19 | CBP | EIF4E1 | EIF4EL1 | EIF4F | eIF-4Eeukaryotic translation initiation factor 4E4q23CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
7323UBE2D3E2(17)KB3 | UBC4/5 | UBCH5Cubiquitin conjugating enzyme E2 D34q24CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
51574LARP7ALAZS | HDCMA18P | PIP7SLa ribonucleoprotein domain family member 74q25CV:PGCnp
DNM:Xu_2012
CompositeSet
1022CDK7CAK1 | CDKN7 | HCAK | MO15 | STK1 | p39MO15cyclin-dependent kinase 75q12.1GO_Annotation
10769PLK2SNK | hPlk2 | hSNKpolo like kinase 25q12.1-q13.2CV:PGCnp
6880TAF9MGC:5067 | STAF31/32 | TAF2G | TAFII-31 | TAFII-32 | TAFII31 | TAFII32 | TAFIID32TATA-box binding protein associated factor 95q13.2DNM:Fromer_2014CompositeSet
3156HMGCRLDLCQ33-hydroxy-3-methylglutaryl-CoA reductase5q13.3-q14CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
10915TCERG1CA150 | TAF2S | Urn1transcription elongation regulator 15q31CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
GSMA_I
GSMA_IIA
GSMA_IIE
5515PPP2CAPP2Ac | PP2CA | PP2Calpha | RP-Cprotein phosphatase 2 catalytic subunit alpha5q31.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
10146G3BP1G3BP | HDH-VIIIG3BP stress granule assembly factor 15q33.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
23367LARP1LARPLa ribonucleoprotein domain family member 15q33.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
23286WWC1HBEBP3 | HBEBP36 | KIBRA | MEMRYQTL | PPP1R168WW and C2 domain containing 15q34CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
3111HLA-DOAHLA-DNA | HLA-DZA | HLADZmajor histocompatibility complex, class II, DO alpha6p21.3CV:PGCnp
GSMA_I
PMID:cooccur
720C4AC4 | C4A2 | C4A3 | C4A4 | C4A6 | C4AD | C4S | CO4 | CPAMD2 | RGcomplement component 4A (Rodgers blood group)6p21.3Association
CV:PGCnp
GSMA_I
PMID:cooccur
28973MRPS18BC6orf14 | HSPC183 | HumanS18a | MRP-S18-2 | MRPS18-2 | PTD017 | S18amtmitochondrial ribosomal protein S18B6p21.3DMG:Jaffe_2016
GSMA_I
1832DSPDCWHKTA | DPdesmoplakin6p24CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
G2Cdb.humanARC
G2Cdb.humanPSD
G2Cdb.humanPSP
10492SYNCRIPGRY-RBP | GRYRBP | HNRNPQ | HNRPQ1 | NSAP1 | PP68 | hnRNP-Qsynaptotagmin binding, cytoplasmic RNA interacting protein6q14-q15CV:PGCnp
262AMD1ADOMETDC | AMD | SAMDCadenosylmethionine decarboxylase 16q21CV:PGCnp
DMG:Wockner_2014
11055ZPBPZPBP1zona pellucida binding protein7p14.3CV:PGCnp
11335CBX3HECH | HP1-GAMMA | HP1Hs-gammachromobox 37p15.2CV:PGCnp
PMID:cooccur
5154PDGFAPDGF-A | PDGF1platelet derived growth factor subunit A7p22DMG:Jaffe_2016
Expression
9265CYTH3ARNO3 | GRP1 | PSCD3cytohesin 37p22.1CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
Potential synaptic genes
55281TMEM140-transmembrane protein 1407q33CV:PGCnp
136319MTPNGCDP | V-1myotrophin7q33CV:PGCnp
GO_Annotation
6009RHEBRHEB2Ras homolog enriched in brain7q36CV:PGCnp
DMG:Wockner_2014
10049DNAJB6DJ4 | DnaJ | HHDJ1 | HSJ-2 | HSJ2 | LGMD1D | LGMD1E | MRJ | MSJ-1DnaJ heat shock protein family (Hsp40) member B67q36.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
10671DCTN6WS-3 | WS3 | p27dynactin subunit 68p12DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
55140ELP3KAT9elongator acetyltransferase complex subunit 38p21.1CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
5520PPP2R2AB55A | B55ALPHA | PR52A | PR55Aprotein phosphatase 2 regulatory subunit B, alpha8p21.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
Network
55872PBKCT84 | HEL164 | Nori-3 | SPK | TOPKPDZ binding kinase8p21.2CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Network
5885RAD21CDLS4 | HR21 | HRAD21 | MCD1 | NXP1 | SCC1 | hHR21RAD21 cohesin complex component8q24CV:PGCnp
51116MRPS2CGI-91 | MRP-S2 | S2mtmitochondrial ribosomal protein S29q34CV:PGCnp
DMG:Jaffe_2016
4957ODF2CT134 | ODF2/1 | ODF2/2 | ODF84outer dense fiber of sperm tails 29q34.11DMG:vanEijk_2014
9329GTF3C4KAT12 | TF3C-delta | TFIII90 | TFIIIC290 | TFIIIC90 | TFIIICDELTAgeneral transcription factor IIIC subunit 49q34.13CV:GWASdb
CV:PGCnp