Search results: The pahtway p4407 has 118 genes in the original annotation. Currently, there are 68 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
9044BTAF1MOT1 | TAF(II)170 | TAF172 | TAFII170B-TFIID TATA-box binding protein associated factor 110q22-q23CV:GWASdb
CV:PGCnp
340665CYP26C1FFDD4cytochrome P450 family 26 subfamily C member 110q23.33CV:PGCnp
GO_Annotation
PMID:cooccur
3983ABLIM1ABLIM | LIMAB1 | LIMATIN | abLIM-1actin binding LIM protein 110q25CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
9573GDF3KFS3 | MCOP7 | MCOPCB6growth differentiation factor 312p13.1CV:PGCnp
PMID:cooccur
7450VWFF8VWF | VWDvon Willebrand factor12p13.3CV:PGCnp
Expression
PMID:cooccur
57494RIMKLBFAM80B | NAAGS | NAAGS-Iribosomal modification protein rimK-like family member B12p13.31CV:GWASdb
CV:PGCnp
3887KRT81HB1 | Hb-1 | KRTHB1 | MLN137 | ghHkb1 | hHAKB2-1keratin 8112q13CV:PGCnp
7637ZNF84HPF2zinc finger protein 8412q24.33DMG:Jaffe_2016
79758DHRS12SDR40C1dehydrogenase/reductase (SDR family) member 1213q14.3DMG:Wockner_2014
85446ZFHX2ZFH-5 | ZNF409zinc finger homeobox 214q11.2CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
1690COCHCOCH-5B2 | COCH5B2 | DFNA9cochlin14q11.2-q13CV:PGCnp
DEG:Sanders_2013
GSMA_I
6547SLC8A3NCX3solute carrier family 8 member A314q24.1CV:PGCnp
DMG:Nishioka_2013
ION BALANCE
6447SCG57B2 | P7B2 | SGNE1 | SgVsecretogranin V15q13-q14CNV:YES
CV:PGCnp
GO_Annotation
NEUROTROPHIN SIGNALING
54852PAQR5MPRGprogestin and adipoQ receptor family member V15q23CV:GWAScat
CV:GWASdb
CV:PGCnp
10933MORF4L1Eaf3 | FWP006 | HsT17725 | MEAF3 | MORFRG15 | MRG15 | S863-6mortality factor 4 like 115q24CV:PGCnp
DMG:Wockner_2014
7041TGFB1I1ARA55 | HIC-5 | HIC5 | TSC-5transforming growth factor beta 1 induced transcript 116p11.2CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
4502MT2AMT2metallothionein 2A16q13CV:PGCnp
PMID:cooccur
116840CNTROBLIP8 | PP1221centrobin, centrosomal BRCA2 interacting protein17p13.1CV:PGCnp
9196KCNAB3AKR6A9 | KCNA3.1B | KCNA3B | KV-BETA-3potassium voltage-gated channel subfamily A regulatory beta subunit 317p13.1CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
58485TRAPPC1BET5 | MUM2trafficking protein particle complex 117p13.1CV:PGCnp
201176ARHGAP27CAMGAP1 | PP905 | SH3D20 | SH3P20Rho GTPase activating protein 2717q21.31CV:PGCnp
26115TANC2ROLSA | rolstetratricopeptide repeat, ankyrin repeat and coiled-coil containing 217q23.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
29115SAP30BPHCNGP | HTRG | HTRPSAP30 binding protein17q25.1CV:PGCnp
DNM:Xu_2012
CompositeSet
124583CANT1DBQD | DBQD1 | SCAN-1 | SCAN1 | SHAPYcalcium activated nucleotidase 117q25.3CV:PGCnp
84617TUBB6HsT1601 | TUBB-5tubulin beta 6 class V18p11.21CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_TAP-PSD-95-CORE
114876OSBPL1AORP-1 | ORP1 | OSBPL1Boxysterol binding protein like 1A18q11.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
9063PIAS2ARIP3 | DIP | MIZ | MIZ1 | PIASX | PIASX-ALPHA | PIASX-BETA | SIZ2 | ZMIZ4protein inhibitor of activated STAT 218q21.1CV:PGCnp
PMID:cooccur
5366PMAIP1APR | NOXAphorbol-12-myristate-13-acetate-induced protein 118q21.32CV:PGCnp
DMG:Jaffe_2016
56848SPHK2SK 2 | SK-2 | SPK 2 | SPK-2sphingosine kinase 219q13.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
6625SNRNP70RNPU1Z | RPU1 | SNRP70 | Snp1 | U1-70K | U170K | U1AP | U1RNPsmall nuclear ribonucleoprotein U1 subunit 7019q13.3CV:PGCnp
63934ZNF667MIPU1zinc finger protein 66719q13.43CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
147948ZNF582-zinc finger protein 58219q13.43CV:PGCnp
10236HNRNPRHNRPR | hnRNP-Rheterogeneous nuclear ribonucleoprotein R1p36.12CV:PGCnp
DMG:Jaffe_2016
51686OAZ3AZ3 | OAZ-t | TISP15ornithine decarboxylase antizyme 31q21.3DMG:Wockner_2014
GSMA_I
GSMA_IIA
23248RPRD2HSPC099 | KIAA0460regulation of nuclear pre-mRNA domain containing 21q21.3CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
9019MPZL1MPZL1b | PZR | PZR1b | PZRa | PZRbmyelin protein zero like 11q24.2Association
CV:PGCnp
PMID:cooccur
26052DNM3Dyna IIIdynamin 31q24.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
10765KDM5BCT31 | JARID1B | PLU-1 | PLU1 | PPP1R98 | PUT1 | RBBP2H1A | RBP2-H1lysine demethylase 5B1q32.1CV:GWASdb
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
3172HNF4AFRTS4 | HNF4 | HNF4a7 | HNF4a8 | HNF4a9 | HNF4alpha | MODY | MODY1 | NR2A1 | NR2A21 | TCF | TCF14hepatocyte nuclear factor 4 alpha20q13.12CV:PGCnp
GO_Annotation
PMID:cooccur
55861DBNDD2C20orf35 | CK1BP | HSMNP1dysbindin (dystrobrevin binding protein 1) domain containing 220q13.12DEG:Sanders_2013
3455IFNAR2IFN-R | IFN-alpha-REC | IFNABR | IFNARB | IMD45interferon alpha and beta receptor subunit 221q22.11CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
114800CCDC85A-coiled-coil domain containing 85A2p16.1CV:PGCnp
3685ITGAVCD51 | MSK8 | VNRA | VTNRintegrin subunit alpha V2q31-q32CV:PGCnp
DMG:Wockner_2014
8828NRP2NP2 | NPN2 | PRO2714 | VEGF165R2neuropilin 22q33.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
51143DYNC1LI1DNCLI1 | LIC1dynein cytoplasmic 1 light intermediate chain 13p22.3CV:GWASdb
CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
7068THRBC-ERBA-2 | C-ERBA-BETA | ERBA2 | GRTH | NR1A2 | PRTH | THR1 | THRB1 | THRB2thyroid hormone receptor beta3p24.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
2815GP9CD42a | GPIXglycoprotein IX platelet3q21.3CV:PGCnp
DMG:Wockner_2014
5217PFN2D3S1319E | PFLprofilin 23q25.1NetworkSTRUCTURAL PLASTICITY
CompositeSet
131408FAM131AC3orf40 | FLAT715 | PRO1378family with sequence similarity 131 member A3q27.1DMG:Wockner_2014
80235PIGZGPI-MT-IV | PIG-Z | SMP3phosphatidylinositol glycan anchor biosynthesis class Z3q29CNV:YES
CV:PGCnp
DMG:Wockner_2014
2983GUCY1B3GC-S-beta-1 | GC-SB3 | GUC1B3 | GUCB3 | GUCSB3 | GUCY1B1guanylate cyclase 1, soluble, beta 34q31.3-q33CV:PGCnp
DMG:Wockner_2014
Expression
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
7097TLR2CD282 | TIL4toll like receptor 24q32CV:PGCnp
PMID:cooccur
51663ZFRSPG71 | ZFR1zinc finger RNA binding protein5p13.3CV:PGCnp
DMG:Montano_2016
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
1393CRHBPCRF-BP | CRFBPcorticotropin releasing hormone binding protein5q13.3CV:PGCnp
PMID:cooccur
NEUROTROPHIN SIGNALING
4762NEUROG1AKA | Math4C | NEUROD3 | bHLHa6 | ngn1neurogenin 15q23-q31Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
5515PPP2CAPP2Ac | PP2CA | PP2Calpha | RP-Cprotein phosphatase 2 catalytic subunit alpha5q31.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
81578COL21A1COLA1L | FP633collagen type XXI alpha 16p12.3-p11.2|6p12.3-p11.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
23113CUL9H7AP1 | PARCcullin 96p21.1CV:GWASdb
CV:PGCnp
GSMA_IIE
CompositeSet
Darnell FMRP targets
285800PRR18-proline rich 186q27CV:PGCnp
DEG:Zhao_2015
8379MAD1L1MAD1 | PIG9 | TP53I9 | TXBP181MAD1 mitotic arrest deficient-like 1 (yeast)7p22CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
LK:YES
PMID:cooccur
23534TNPO3IPO12 | LGMD1F | MTR10A | TRN-SR | TRN-SR2 | TRNSRtransportin 37q32.1CV:PGCnpAscano FMRP targets
835CASP2CASP-2 | ICH1 | NEDD-2 | NEDD2 | PPP1R57caspase 27q34-q35CV:PGCnp
23516SLC39A14LZT-Hs4 | NET34 | ZIP14 | cig19solute carrier family 39 member 148p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
4342MOSMSVv-mos Moloney murine sarcoma viral oncogene homolog8q11CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
92421CHMP4CSNF7-3 | Shax3 | VPS32Ccharged multivesicular body protein 4C8q21.13CV:GWASdb
CV:PGCnp
51010EXOSC3CGI-102 | PCH1B | RRP40 | Rrp40p | bA3J10.7 | hRrp-40 | p10exosome component 39p11CV:PGCnp
PMID:cooccur
81689ISCA1HBLD2 | ISA1 | hIscAiron-sulfur cluster assembly 19q21.33CV:PGCnp
6736SRYSRXX1 | SRXY1 | TDF | TDYsex determining region YYp11.3PMID:cooccur