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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: GIGYF2

Summary

GeneID

26058

Symbol

GIGYF2

Synonyms

Description

GRB10 interacting GYF protein 2

Locus tag

Gene type

protein-coding

Map location

2q37.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Expression

P value: 1.654

Literature

High-throughput literature-search

Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]

Click to show detail

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005515

protein binding

IPI

16120600

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
GRB10	GRB-IR \| Grb-10 \| IRBP \| KIAA0207 \| MEG1 \| RSS	growth factor receptor-bound protein 10	-	HPRD,BioGRID	12771153

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
THUM_SYSTOLIC_HEART_FAILURE_DN	244	147	All SZGR genes in this pathway
VECCHI_GASTRIC_CANCER_ADVANCED_VS_EARLY_UP	175	120	All SZGR genes in this pathway
TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_16D_DN	143	83	All SZGR genes in this pathway
RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_DN	537	339	All SZGR genes in this pathway
TERAMOTO_OPN_TARGETS_CLUSTER_5	7	5	All SZGR genes in this pathway
DACOSTA_UV_RESPONSE_VIA_ERCC3_DN	855	609	All SZGR genes in this pathway
DACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_DN	483	336	All SZGR genes in this pathway
RICKMAN_METASTASIS_UP	344	180	All SZGR genes in this pathway
SCHAEFFER_PROSTATE_DEVELOPMENT_6HR_DN	514	330	All SZGR genes in this pathway
ACEVEDO_METHYLATED_IN_LIVER_CANCER_DN	940	425	All SZGR genes in this pathway
YAUCH_HEDGEHOG_SIGNALING_PARACRINE_UP	149	85	All SZGR genes in this pathway
PILON_KLF1_TARGETS_UP	504	321	All SZGR genes in this pathway
WAKABAYASHI_ADIPOGENESIS_PPARG_RXRA_BOUND_8D	882	506	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-143	185	191	1A	hsa-miR-143^brain	UGAGAUGAAGCACUGUAGCUCA
miR-143	185	191	1A	hsa-miR-143^brain	UGAGAUGAAGCACUGUAGCUCA
miR-188	933	939	1A	hsa-miR-188	CAUCCCUUGCAUGGUGGAGGGU
miR-188	933	939	1A	hsa-miR-188	CAUCCCUUGCAUGGUGGAGGGU
miR-30-3p	1063	1069	1A	hsa-miR-30a-3p	CUUUCAGUCGGAUGUUUGCAGC
miR-30-3p	1063	1069	1A	hsa-miR-30e-3p	CUUUCAGUCGGAUGUUUACAGC
miR-30-5p	1681	1688	1A,m8	hsa-miR-30a-5p	UGUAAACAUCCUCGACUGGAAG
				hsa-miR-30c^brain	UGUAAACAUCCUACACUCUCAGC
				hsa-miR-30d^SZ	UGUAAACAUCCCCGACUGGAAG
				hsa-miR-30b^SZ	UGUAAACAUCCUACACUCAGCU
				hsa-miR-30e-5p	UGUAAACAUCCUUGACUGGA
miR-330	1633	1639	m8	hsa-miR-330^brain	GCAAAGCACACGGCCUGCAGAGA
miR-485-3p	902	909	1A,m8	hsa-miR-485-3p	GUCAUACACGGCUCUCCUCUCU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.