Gene Page: PRR3

Summary
GeneID  80742
Symbol  PRR3
Synonyms  CAT56|MGC161733|MGC161735
Description  proline rich 3
See related  HGNC:21149|Ensembl:ENSG00000204576|HPRD:17915|
Locus tag  DADB-87H23.3
Gene type  protein-coding
Map location  6p21.33
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.033 
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]Click to show detail
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
CUGBP10.860.87
ZNF4900.860.86
NSD10.860.87
CRKRS0.850.86
DDX60.850.88
TUG10.850.86
USP240.850.85
ZNF1410.850.87
N4BP10.850.87
BIRC60.850.86
Top 10 negatively co-expressed genes
MT-CO2-0.67-0.78
AF347015.31-0.67-0.77
AF347015.27-0.66-0.75
MT-CYB-0.65-0.75
AF347015.8-0.64-0.76
IFI27-0.64-0.74
AF347015.21-0.64-0.81
FXYD1-0.64-0.74
AF347015.33-0.64-0.72
HIGD1B-0.64-0.75
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0003676nucleic acid bindingIEA-
GO:0008270zinc ion bindingIEA-
GO:0046872metal ion bindingIEA-
 
Pathway annotation
Pathway namePathway size# SZGR genes in pathwayInfo
GRASEMANN_RETINOBLASTOMA_WITH_6P_AMPLIFICATION 1414All SZGR genes in this pathway
SCHLOSSER_MYC_TARGETS_AND_SERUM_RESPONSE_UP 4732All SZGR genes in this pathway
DACOSTA_UV_RESPONSE_VIA_ERCC3_DN 855609All SZGR genes in this pathway
DACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_DN 483336All SZGR genes in this pathway
AMUNDSON_GENOTOXIC_SIGNATURE 10568All SZGR genes in this pathway
PUJANA_BRCA2_PCC_NETWORK 423265All SZGR genes in this pathway
PUJANA_CHEK2_PCC_NETWORK 779480All SZGR genes in this pathway
RICKMAN_METASTASIS_UP 344180All SZGR genes in this pathway
BENPORATH_MYC_MAX_TARGETS 775494All SZGR genes in this pathway
ONDER_CDH1_TARGETS_2_UP 256159All SZGR genes in this pathway
YE_METASTATIC_LIVER_CANCER 2713All SZGR genes in this pathway
JAIN_NFKB_SIGNALING 7544All SZGR genes in this pathway
IVANOVA_HEMATOPOIESIS_EARLY_PROGENITOR 532309All SZGR genes in this pathway
BROWNE_HCMV_INFECTION_48HR_DN 504323All SZGR genes in this pathway
BROWNE_HCMV_INFECTION_6HR_DN 160101All SZGR genes in this pathway
MONNIER_POSTRADIATION_TUMOR_ESCAPE_UP 393244All SZGR genes in this pathway
FUJII_YBX1_TARGETS_DN 202132All SZGR genes in this pathway
KIM_ALL_DISORDERS_OLIGODENDROCYTE_NUMBER_CORR_UP 756494All SZGR genes in this pathway
ROESSLER_LIVER_CANCER_METASTASIS_UP 10772All SZGR genes in this pathway
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-124/506511m8hsa-miR-506UAAGGCACCCUUCUGAGUAGA
hsa-miR-124brainUAAGGCACGCGGUGAAUGCC
miR-1826987041Ahsa-miR-182UUUGGCAAUGGUAGAACUCACA
miR-224668674m8hsa-miR-224CAAGUCACUAGUGGUUCCGUUUA
miR-27104410501Ahsa-miR-27abrainUUCACAGUGGCUAAGUUCCGC
hsa-miR-27bbrainUUCACAGUGGCUAAGUUCUGC
miR-29306312m8hsa-miR-29aSZUAGCACCAUCUGAAAUCGGUU
hsa-miR-29bSZUAGCACCAUUUGAAAUCAGUGUU
hsa-miR-29cSZUAGCACCAUUUGAAAUCGGU
miR-324-3p105510611Ahsa-miR-324-3pCCACUGCCCCAGGUGCUGCUGG
miR-330612618m8hsa-miR-330brainGCAAAGCACACGGCCUGCAGAGA
miR-34b777783m8hsa-miR-34bUAGGCAGUGUCAUUAGCUGAUUG
miR-37810971103m8hsa-miR-378CUCCUGACUCCAGGUCCUGUGU
miR-966987041Ahsa-miR-96brainUUUGGCACUAGCACAUUUUUGC
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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