Search results: The pahtway p2266 has 423 genes in the original annotation. Currently, there are 265 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
22929SEPHS1SELD | SPS | SPS1selenophosphate synthetase 110p14CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
22944KINBTCD | KIN17 | Rts2Kin17 DNA and RNA binding protein10p14CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
2625GATA3HDR | HDRSGATA binding protein 310p15CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
5588PRKCQPRKCT | nPKC-thetaprotein kinase C theta10p15CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Ascano FMRP targets
7073TIAL1TCBP | TIARTIA1 cytotoxic granule-associated RNA binding protein-like 110qCV:GWASdb
CV:PGCnp
11130ZWINTHZwint-1 | KNTC2AP | SIP30 | ZWINT1ZW10 interacting kinetochore protein10q21-q22CV:PGCnp
DMG:Jaffe_2016
G2Cdb.humanPSD
G2Cdb.humanPSP
983CDK1CDC2 | CDC28A | P34CDC2cyclin-dependent kinase 110q21.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
9044BTAF1MOT1 | TAF(II)170 | TAF172 | TAFII170B-TFIID TATA-box binding protein associated factor 110q22-q23CV:GWASdb
CV:PGCnp
23234DNAJC9HDJC9 | JDD1 | SB73DnaJ heat shock protein family (Hsp40) member C910q22.2DMG:Wockner_2014
PMID:cooccur
132ADKAKadenosine kinase10q22|10q11-q24CV:PGCnp
PMID:cooccur
1791DNTTTDTDNA nucleotidylexotransferase10q23-q24CV:PGCnp
9585KIF20BCT90 | KRMP1 | MPHOSPH1 | MPP-1 | MPP1kinesin family member 20B10q23.31CV:PGCnp
10556RPP30TSG15ribonuclease P/MRP 30kDa subunit10q23.31CV:PGCnp
23401FRAT2-frequently rearranged in advanced T-cell lymphomas 210q24.1CV:PGCnp
3832KIF11EG5 | HKSP | KNSL1 | MCLMR | TRIP5kinesin family member 1110q24.1CV:PGCnp
CV:PheWAS
84986ARHGAP19-Rho GTPase activating protein 1910q24.1CV:PGCnp
DEG:Zhao_2015
9126SMC3BAM | BMH | CDLS3 | CSPG6 | HCAP | SMC3L1structural maintenance of chromosomes 310q25CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
9184BUB3BUB3L | hBUB3BUB3 mitotic checkpoint protein10q26CV:GWAScat
CV:PGCnp
GSMA_IIA
2674GFRA1GDNFR | GDNFRA | GFR-ALPHA-1 | RET1L | RETL1 | TRNR1GDNF family receptor alpha 110q26.11CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
4288MKI67KIA | MIB- | MIB-1 | PPP1R105marker of proliferation Ki-6710q26.2CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
GSMA_IIA
CompositeSet
Ascano FMRP targets
1643DDB2DDBB | UV-DDB2 | XPEdamage specific DNA binding protein 211p11.2CV:PGCnp
9793CKAP5CHTOG | MSPS | TOG | TOGp | ch-TOGcytoskeleton associated protein 511p11.2CV:PGCnp
CV:PheWAS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
5896RAG1RAG-1 | RNF74recombination activating gene 111p13CV:PGCnp
6240RRM1R1 | RIR1 | RR1ribonucleotide reductase catalytic subunit M111p15.5CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
2237FEN1FEN-1 | MF1 | RAD2flap structure-specific endonuclease 111q12DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
6749SSRP1FACT | FACT80 | T160structure specific recognition protein 111q12CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
Chromatin Remodeling Genes
3992FADS1D5D | FADS6 | FADSD5 | LLCDL1 | TU12fatty acid desaturase 111q12.2-q13.1DEG:Sanders_2013
PMID:cooccur
10714POLD3P66 | P68 | PPP1R128polymerase (DNA) delta 3, accessory subunit11q14CV:PGCnp
9702CEP57MVA2 | PIG8 | TSP57centrosomal protein 57kDa11q21CV:PGCnp
915CD3DCD3-DELTA | IMD19 | T3DCD3d molecule11q23CV:PGCnp
GO_Annotation
GSMA_I
916CD3EIMD18 | T3E | TCRECD3e molecule11q23CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
GSMA_I
3014H2AFXH2A.X | H2A/X | H2AXH2A histone family member X11q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
1111CHEK1CHK1checkpoint kinase 111q24.2CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
1663DDX11CHL1 | CHLR1 | KRG2 | WABSDEAD/H-box helicase 1112p11CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
Expression
5965RECQLRECQL1 | RecQ1RecQ like helicase12p12DMG:Jaffe_2016
9700ESPL1ESP1 | SEPAextra spindle pole bodies like 1, separase12qCV:PGCnp
GO_Annotation
Ascano FMRP targets
79022TMEM106C-transmembrane protein 106C12q13.1CV:PGCnp
9416DDX23PRPF28 | SNRNP100 | U5-100K | U5-100KD | prp28DEAD-box helicase 2312q13.12CV:PGCnpAscano FMRP targets
10024TROAPTASTINtrophinin associated protein12q13.12DMG:Jaffe_2016
8914TIMELESSTIM | TIM1 | hTIMtimeless circadian clock12q13.3Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
51561IL23AIL-23 | IL-23A | IL23P19 | P19 | SGRFinterleukin 23 subunit alpha12q13.3CV:PGCnp
4193MDM2ACTFS | HDMX | hdm2MDM2 proto-oncogene12q14.3-q15CV:PGCnp
Network
PMID:cooccur
80184CEP2903H11Ag | BBS14 | CT87 | JBTS5 | LCA10 | MKS4 | NPHP6 | POC3 | SLSN6 | rd16centrosomal protein 290kDa12q21.32CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
7374UNGDGU | HIGM4 | HIGM5 | UDG | UNG1 | UNG15 | UNG2uracil DNA glycosylase12q23-q24.1CV:PGCnp
4801NFYBCBF-A | CBF-B | HAP3 | NF-YBnuclear transcription factor Y subunit beta12q23.3CV:PGCnp
DMG:Jaffe_2016
5501PPP1CCPP-1G | PP1C | PPP1Gprotein phosphatase 1 catalytic subunit gamma12q24.1-q24.2CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Chromatin Remodeling Genes
Potential synaptic genes
5426POLECRCS12 | FILS | POLE1polymerase (DNA) epsilon, catalytic subunit12q24.3CV:PGCnp
PMID:cooccur
Ascano FMRP targets
9735KNTC1RODkinetochore associated 112q24.31CV:PGCnp
10198MPHOSPH9MPP-9 | MPP9M-phase phosphoprotein 912q24.31CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
LK:YES
7637ZNF84HPF2zinc finger protein 8412q24.33DMG:Jaffe_2016
675BRCA2BRCC2 | BROVCA2 | FACD | FAD | FAD1 | FANCD | FANCD1 | GLM3 | PNCA2 | XRCC11breast cancer 213q12.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
6541SLC7A1ATRC1 | CAT-1 | ERR | HCAT1 | REC1Lsolute carrier family 7 member 113q12.3CV:PGCnp
DMG:Wockner_2014
Expression
5983RFC3RFC38replication factor C subunit 313q13.2CV:PGCnp
DMG:Jaffe_2016
5994RFXAP-regulatory factor X associated protein13q14CV:GWASdb
CV:PGCnp
5925RB1OSRC | PPP1R130 | RB | p105-Rb | pRb | pp110retinoblastoma 113q14.2CV:PGCnp
Network
PMID:cooccur
8847DLEU21B4 | BCMSUN | DLB2 | LEU2 | LINC00022 | MIR15AHG | NCRNA00022 | RFP2OS | TRIM13OSdeleted in lymphocytic leukemia 2 (non-protein coding)13q14.3CV:PGCnp
DMG:Wockner_2014
Expression
PMID:cooccur
1102RCBTB2CHC1L | RLGRCC1 and BTB domain containing protein 213q14.3CV:PGCnp
7027TFDP1DILC | DP1 | DRTF1 | Dp-1transcription factor Dp-113q34CV:PGCnp
DMG:Wockner_2014
8874ARHGEF7BETA-PIX | COOL-1 | COOL1 | Nbla10314 | P50 | P50BP | P85 | P85COOL1 | P85SPR | PAK3 | PIXBRho guanine nucleotide exchange factor 713q34CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
5427POLE2DPE2polymerase (DNA) epsilon 2, accessory subunit14q21-q22CV:PGCnp
5411PNNDRS | DRSP | SDK3 | memApinin, desmosome associated protein14q21.1CV:PGCnp
DEG:Maycox_2009
PMID:cooccur
1033CDKN3CDI1 | CIP2 | KAP | KAP1cyclin-dependent kinase inhibitor 314q22CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Kranz_2015
PMID:cooccur
11169WDHD1AND-1 | AND1 | CHTF4 | CTF4WD repeat and HMG-box DNA binding protein 114q22.2CV:PGCnpAscano FMRP targets
7517XRCC3CMM6X-ray repair complementing defective repair in Chinese hamster cells 314q32.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
701BUB1BBUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1BUB1 mitotic checkpoint serine/threonine kinase B15q15CV:PGCnp
DMG:Jaffe_2016
1854DUTdUTPasedeoxyuridine triphosphatase15q21.1CV:GWASdb
DMG:vanEijk_2014
PMID:cooccur
8854ALDH1A2RALDH(II) | RALDH2 | RALDH2-Taldehyde dehydrogenase 1 family member A215q21.3CV:PGCnp
GO_Annotation
PMID:cooccur
9133CCNB2HsT17299cyclin B215q22.2CV:GWASdb
CV:PGCnp
9768KIAA0101L5 | NS5ATP9 | OEATC | OEATC-1 | OEATC1 | PAF | PAF15 | p15(PAF) | p15/PAF | p15PAFKIAA010115q22.31CV:PGCnp
9493KIF23CHO1 | KNSL5 | MKLP-1 | MKLP1kinesin family member 2315q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
1138CHRNA5LNCR2cholinergic receptor nicotinic alpha 5 subunit15q24CV:PGC128
CV:PGCnp
GO_Annotation
PMID:cooccur
641BLMBS | RECQ2 | RECQL2 | RECQL3Bloom syndrome RecQ like helicase15q26.1CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
55215FANCIKIAA1794Fanconi anemia complementation group I15q26.1CV:PGCnpAscano FMRP targets
6627SNRPA1Lea1small nuclear ribonucleoprotein polypeptide A'15q26.3CV:PGCnp
DMG:Wockner_2014
8479HIRIP3-HIRA interacting protein 316p11.2CNV:YES
CV:PGCnp
DMG:vanEijk_2014
GSMA_IIE
4150MAZPUR1 | Pur-1 | SAF-1 | SAF-2 | SAF-3 | ZF87 | ZNF801 | Zif87MYC associated zinc finger protein16p11.2CNV:YES
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
CompositeSet
Darnell FMRP targets
3835KIF22A-328A3.2 | KID | KNSL4 | OBP | OBP-1 | OBP-2 | SEMDJL2kinesin family member 2216p11.2CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
4363ABCC1ABC29 | ABCC | GS-X | MRP | MRP1ATP binding cassette subfamily C member 116p13.1CNV:YES
CV:PGCnp
GSMA_IIE
PMID:cooccur
7329UBE2IC358B7.1 | P18 | UBC9ubiquitin conjugating enzyme E2 I16p13.3CV:PGCnp
DMG:Jaffe_2016
Network
899CCNFFBX1 | FBXO1cyclin F16p13.3CV:PGCnp
DMG:Nishioka_2013
11051NUDT21CFIM25 | CPSF5nudix hydrolase 2116q12.2CV:PGCnp
DMG:Nishioka_2013
Network
8883NAE1A-116A10.1 | APPBP1 | HPP1 | ula-1NEDD8 activating enzyme E1 subunit 116q22CV:PGCnp
10664CTCFMRD21CCCTC-binding factor16q22.1CV:PGCnp
PMID:cooccur
80777CYB5BCYB5-M | CYPB5M | OMB5cytochrome b5 type B (outer mitochondrial membrane)16q22.1CV:PGCnpG2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
4775NFATC3NFAT4 | NFATXnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 316q22.2CV:GWAScat
CV:PGC128
CV:PGCnp
PMID:cooccur
10200MPHOSPH6MPP | MPP-6 | MPP6M-phase phosphoprotein 616q23.3CV:PGCnp
DMG:Jaffe_2016
Network
9013TAF1CMGC:39976 | SL1 | TAFI110 | TAFI95TATA-box binding protein associated factor, RNA polymerase I subunit C16q24DNM:Fromer_2014CompositeSet
81620CDT1DUP | RIS2chromatin licensing and DNA replication factor 116q24.3CV:PGCnp
2175FANCAFA | FA-H | FA1 | FAA | FACA | FAH | FANCHFanconi anemia complementation group A16q24.3CV:PGCnp
6117RPA1HSSB | MST075 | REPA1 | RF-A | RP-A | RPA70replication protein A117p13.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
642BLMHBH | BMHbleomycin hydrolase17q11.2CV:PGCnp
6776STAT5AMGF | STAT5signal transducer and activator of transcription 5A17q11.2CV:PGCnp
DMG:Wockner_2014
Network
23512SUZ12CHET9 | JJAZ1SUZ12 polycomb repressive complex 2 subunit17q11.2CV:PGCnp
DMG:Nishioka_2013
Chromatin Remodeling Genes
3980LIG3LIG2ligase III, DNA, ATP-dependent17q11.2-q12CV:PGCnpAscano FMRP targets
26574AATFBFR2 | CHE-1 | CHE1 | DEDapoptosis antagonizing transcription factor17q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
9326ZNHIT3TRIP3zinc finger HIT-type containing 317q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
672BRCA1BRCAI | BRCC1 | BROVCA1 | FANCS | IRIS | PNCA4 | PPP1R53 | PSCP | RNF53breast cancer 117q21CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
7153TOP2ATOP2 | TP2Atopoisomerase (DNA) II alpha17q21.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
2535FZD2Fz2 | fz-2 | fzE2 | hFz2frizzled class receptor 217q21.31CV:PGCnp
DMG:Jaffe_2016
10951CBX1CBX | HP1-BETA | HP1Hs-beta | HP1Hsbeta | M31 | MOD1 | p25betachromobox 117q21.32CV:PGCnp
996CDC27ANAPC3 | APC3 | CDC27Hs | D0S1430E | D17S978E | H-NUC | HNUC | NUC2cell division cycle 2717q21.32CV:PGCnp
1353COX11COX11PCOX11 cytochrome c oxidase copper chaperone17q22CV:PGCnp
5889RAD51CBROVCA3 | FANCO | R51H3 | RAD51L2RAD51 paralog C17q22CV:PGCnp
DMG:Wockner_2014
11011TLK2HsHPK | PKU-ALPHAtousled like kinase 217q23CV:PGCnp
DNM:Gulsuner_2013
Network
5578PRKCAAAG6 | PKC-alpha | PKCA | PRKACAprotein kinase C alpha17q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
5608MAP2K6MAPKK6 | MEK6 | MKK6 | PRKMK6 | SAPKK-3 | SAPKK3mitogen-activated protein kinase kinase 617q24.3CV:PGCnp
3607FOXK2ILF | ILF-1 | ILF1forkhead box K217q25CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
6904TBCDSSD-1 | tfcDtubulin folding cofactor D17q25.3CV:GWASdb
CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
PMID:cooccur
5932RBBP8COM1 | CTIP | JWDS | RIM | SAE2 | SCKL2retinoblastoma binding protein 818q11.2CV:PGCnp
DMG:Jaffe_2016
25804LSM4GRP | YER112WLSM4 homolog, U6 small nuclear RNA and mRNA degradation associated19p13.11CV:GWASdb
CV:PGCnp
Network
94039ZNF101HZF12zinc finger protein 10119p13.11CV:PGCnp
10212DDX39ABAT1 | BAT1L | DDX39 | DDXL | URH49DEAD-box helicase 39A19p13.12CV:PGCnp
DNM:Gulsuner_2013
1786DNMT1ADCADN | AIM | CXXC9 | DNMT | HSN1E | MCMT | m.HsaIDNA (cytosine-5-)-methyltransferase 119p13.2CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
6597SMARCA4BAF190 | BAF190A | BRG1 | MRD16 | RTPS2 | SNF2 | SNF2L4 | SNF2LB | SWI2 | hSNF2bSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 419p13.2CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
10036CHAF1ACAF-1 | CAF1 | CAF1B | CAF1P150 | P150chromatin assembly factor 1 subunit A19p13.3CV:PGCnp
DMG:Wockner_2014
Network
6929TCF3E2A | E47 | ITF1 | TCF-3 | VDIR | bHLHb21transcription factor 319p13.3CV:PGCnp
DMG:Montano_2016
DMG:vanEijk_2014
6626SNRPAMud1 | U1-A | U1Asmall nuclear ribonucleoprotein polypeptide A19q13.1CV:PGCnp
DMG:Jaffe_2016
11100HNRNPUL1E1B-AP5 | E1BAP5 | HNRPUL1heterogeneous nuclear ribonucleoprotein U-like 119q13.2CV:PGCnpCompositeSet
Darnell FMRP targets
5424POLD1CDC2 | CRCS10 | MDPL | POLDpolymerase (DNA) delta 1, catalytic subunit19q13.3CV:PGCnp
DMG:Wockner_2014
Expression
581BAXBCL2L4BCL2-associated X protein19q13.3-q13.4GO_Annotation
PMID:cooccur
4849CNOT3LENG2 | NOT3 | NOT3HCCR4-NOT transcription complex subunit 319q13.4CV:PGCnp
10155TRIM28KAP1 | PPP1R157 | RNF96 | TF1B | TIF1Btripartite motif containing 2819q13.4CV:PGCnpAscano FMRP targets
79084WDR77HKMT1069 | MEP-50 | MEP50 | Nbla10071 | p44 | p44/Mep50WD repeat domain 771p13.2CV:PGCnp
Expression
GSMA_I
22823MTF2M96 | PCL2 | TDRD19A | dJ976O13.2metal response element binding transcription factor 21p22.1CV:GWASdb
CV:PGCnp
11146GLMNFAP | FAP48 | FAP68 | FKBPAP | GLML | GVM | VMGLOMglomulin, FKBP associated protein1p22.1CV:PGCnp
8880FUBP1FBP | FUBP | hDH Vfar upstream element binding protein 11p31.1CV:PGCnp
GSMA_IIA
7398USP1UBPubiquitin specific peptidase 11p31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
6491STILMCPH7 | SILSCL/TAL1 interrupting locus1p32CV:PGCnp
DMG:Jaffe_2016
991CDC20CDC20A | bA276H19.3 | p55CDCcell division cycle 201p34.1CV:PGCnp
Network
PMID:cooccur
11004KIF2CCT139 | KNSL6 | MCAKkinesin family member 2C1p34.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
3932LCKIMD22 | LSK | YT16 | p56lck | pp58lckLCK proto-oncogene, Src family tyrosine kinase1p34.3CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
3925STMN1C1orf215 | LAP18 | Lag | OP18 | PP17 | PP19 | PR22 | SMNstathmin 11p36.11CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
23028KDM1AAOF2 | BHC110 | CPRF | KDM1 | LSD1lysine demethylase 1A1p36.12CV:PGCnp
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
910CD1BCD1 | CD1A | R1CD1b molecule1q23.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
3586IL10CSIF | GVHDS | IL-10 | IL10A | TGIFinterleukin 101q31-q32Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
5929RBBP5RBQ3 | SWD1retinoblastoma binding protein 51q32CV:PGCnp
DNM:Gulsuner_2013
Chromatin Remodeling Genes
9928KIF14MKS12kinesin family member 141q32.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
8443GNPATDAP-AT | DAPAT | DHAPAT | RCDP2glyceronephosphate O-acyltransferase1q42Association
CV:PGCnp
PMID:cooccur
CompositeSet
6726SRP9ALURBPsignal recognition particle 9kDa1q42.12CV:PGCnp
DMG:Nishioka_2013
6628SNRPBCCMS | COD | SNRPB1 | Sm-B/B' | SmB/B' | SmB/SmB' | snRNP-Bsmall nuclear ribonucleoprotein polypeptides B and B120p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3420IDH3BH-IDHB | RP46isocitrate dehydrogenase 3 (NAD+) beta20p13CV:PGCnp
Expression
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
5111PCNAATLD2proliferating cell nuclear antigen20pter-p12Network
PMID:cooccur
171023ASXL1BOPS | MDSadditional sex combs like 1, transcriptional regulator20q11CV:PGCnp
DNM:Fromer_2014
CompositeSet
Chromatin Remodeling Genes
22919MAPRE1EB1microtubule associated protein RP/EB family member 120q11.1-q11.23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
22913RALYHNRPCL2 | P542RALY heterogeneous nuclear ribonucleoprotein20q11.21-q11.23CV:PGCnp
7150TOP1TOPItopoisomerase (DNA) I20q12-q13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Ascano FMRP targets
100ADA-adenosine deaminase20q13.12CV:PGCnp
Network
PMID:cooccur
11065UBE2CUBCH10 | dJ447F3.2ubiquitin conjugating enzyme E2 C20q13.12CV:PGCnp
DMG:Wockner_2014
8480RAE1MIG14 | MRNP41 | Mnrp41 | dJ481F12.3 | dJ800J21.1ribonucleic acid export 120q13.31DMG:Nishioka_2013
6874TAF4TAF2C | TAF2C1 | TAF4A | TAFII130 | TAFII135TATA-box binding protein associated factor 420q13.33CV:PGCnp
3150HMGN1HMG14high mobility group nucleosome binding domain 121q22.2CV:PGCnp
861RUNX1AML1 | AML1-EVI-1 | AMLCR1 | CBF2alpha | CBFA2 | EVI-1 | PEBP2aB | PEBP2alpharunt related transcription factor 121q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
8318CDC45CDC45L | CDC45L2 | PORC-PI-1cell division cycle 4522q11.21CNV:YES
CV:PGCnp
GSMA_I
11200CHEK2CDS1 | CHK2 | HuCds1 | LFS2 | PP1425 | RAD53 | hCds1checkpoint kinase 222q12.1CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
GSMA_I
9402GRAP2GADS | GRAP-2 | GRB2L | GRBLG | GRID | GRPL | GrbX | Grf40 | Mona | P38GRB2-related adaptor protein 222q13.2CV:GWASdb
CV:PGCnp
Network
22934RPIARPI | RPIADribose 5-phosphate isomerase A2p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
7514XPO1CRM1 | emb | exp1exportin 12p15CV:PGCnp
DMG:Jaffe_2016
790CADCDG1Zcarbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase2p22-p21CV:PGCnp
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
1058CENPACENP-A | CenH3centromere protein A2p23.3CV:PGCnp
54454ATAD2B-ATPase family, AAA domain containing 2B2p24.1-p23.3CV:PGCnp
23397NCAPHBRRN1 | CAP-Hnon-SMC condensin I complex subunit H2q11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
23020SNRNP200ASCC3L1 | BRR2 | HELIC2 | RP33 | U5-200KDsmall nuclear ribonucleoprotein U5 subunit 2002q11.2CV:PGCnp
Network
Ascano FMRP targets
7535ZAP70SRK | STCD | STD | TZK | ZAP-70zeta chain of T cell receptor associated protein kinase 70kDa2q12CV:PGCnp
GO_Annotation
GSMA_I
699BUB1BUB1A | BUB1L | hBUB1BUB1 mitotic checkpoint serine/threonine kinase2q14CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
4175MCM6MCG40308 | Mis5 | P105MCMminichromosome maintenance complex component 62q21CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
Ascano FMRP targets
3938LCTLAC | LPH | LPH1lactase2q21DNM:Xu_2012
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
7852CXCR4CD184 | D2S201E | FB22 | HM89 | HSY3RR | LAP-3 | LAP3 | LCR1 | LESTR | NPY3R | NPYR | NPYRL | NPYY3R | WHIM | WHIMSC-X-C motif chemokine receptor 42q21CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
55183RIF1-replication timing regulatory factor 12q23.3CV:PGCnp
DNM:Fromer_2014
GSMA_IIA
Network
CompositeSet
57405SPC25AD024 | SPBC25 | hSpc25SPC25, NDC80 kinetochore complex component2q31.1CV:GWASdb
CV:PGCnp
GSMA_IIA
580BARD1-BRCA1 associated RING domain 12q35CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
9759HDAC4AHO3 | BDMR | HA6116 | HD4 | HDAC-4 | HDAC-A | HDACAhistone deacetylase 42q37.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
1841DTYMKCDC8 | PP3731 | TMPK | TYMKdeoxythymidylate kinase2q37.3CV:PGCnp
DMG:Jaffe_2016
7110TMF1ARA160 | TMFTATA element modulatory factor 13p14.1CV:PGCnp
DMG:Nishioka_2013
4292MLH1COCA2 | FCC2 | HNPCC | HNPCC2 | hMLH1mutL homolog 13p21.3CV:PGCnp
GSMA_I
131566DCBLD2CLCP1 | ESDNdiscoidin, CUB and LCCL domain containing 23q12.1|3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
961CD47IAP | MER6 | OA3CD47 molecule3q13.1-q13.2CV:PGCnp
Expression
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
4690NCK1NCK | NCKalpha | nck-1NCK adaptor protein 13q21CV:PGCnp
GO_Annotation
Network
5096PCCB-propionyl-CoA carboxylase beta subunit3q21-q22CV:PGCnp
DMG:Jaffe_2016
11073TOPBP1TOP2BP1topoisomerase (DNA) II binding protein 13q22.1CV:PGCnp
CV:PheWAS
545ATRFCTCS | FRP1 | MEC1 | SCKL | SCKL1ATR serine/threonine kinase3q23CV:PGCnp
PMID:cooccur
Ascano FMRP targets
8833GMPS-guanine monophosphate synthase3q24CV:PGCnp
GO_Annotation
PMID:cooccur
23200ATP11BATPIF | ATPIRATPase phospholipid transporting 11B (putative)3q27CV:PGCnp
DMG:Jaffe_2016
5062PAK2PAK65 | PAKgammap21 protein (Cdc42/Rac)-activated kinase 23q29CNV:YES
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
1487CTBP1BARSC-terminal binding protein 14p16CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
PROTEIN CLUSTERING
CompositeSet
Darnell FMRP targets
7468WHSC1MMSET | NSD2 | REIIBP | TRX5 | WHSWolf-Hirschhorn syndrome candidate 14p16.3CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
10606PAICSADE2 | ADE2H1 | AIRC | PAISphosphoribosylaminoimidazole carboxylase; phosphoribosylaminoimidazolesuccinocarboxamide synthase4q12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
23173METAP1MAP1A | MetAP1Amethionyl aminopeptidase 14q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
1062CENPECENP-E | KIF10 | MCPH13 | PPP1R61centromere protein E4q24-q25CV:PGCnp
DMG:Jaffe_2016
839CASP6MCH2caspase 64q25CV:PGCnp
Network
Ascano FMRP targets
51176LEF1LEF-1 | TCF10 | TCF1ALPHA | TCF7L3lymphoid enhancer binding factor 14q25CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
51574LARP7ALAZS | HDCMA18P | PIP7SLa ribonucleoprotein domain family member 74q25CV:PGCnp
DNM:Xu_2012
CompositeSet
4085MAD2L1HSMAD2 | MAD2MAD2 mitotic arrest deficient-like 1 (yeast)4q27CV:PGCnp
DMG:Jaffe_2016
1047CLGN-calmegin4q28.3-q31.1DMG:Jaffe_2016
3148HMGB2HMG2high mobility group box 24q31CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
PMID:cooccur
23240KIAA0922TMEM131LKIAA09224q31.3CV:GWASdb
CV:PGCnp
Ascano FMRP targets
2195FAT1CDHF7 | CDHR8 | FAT | ME5 | hFat1FAT atypical cadherin 14q35CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
3157HMGCS1HMGCS3-hydroxy-3-methylglutaryl-CoA synthase 15p12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
6502SKP2FBL1 | FBXL1 | FLB1 | p45S-phase kinase-associated protein 2, E3 ubiquitin protein ligase5p13CV:PGCnp
6902TBCA-tubulin folding cofactor A5q14.1CV:PGCnp
DMG:Jaffe_2016
64848YTHDC2CAHLYTH domain containing 25q22.2CV:PGCnp
DMG:Jaffe_2016
4001LMNB1ADLD | LMN | LMN2 | LMNBlamin B15q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
995CDC25CCDC25 | PPP1R60cell division cycle 25C5q31CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
8841HDAC3HD3 | RPD3 | RPD3-2histone deacetylase 35q31GSMA_I
PMID:cooccur
Chromatin Remodeling Genes
10915TCERG1CA150 | TAF2S | Urn1transcription elongation regulator 15q31CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
GSMA_I
GSMA_IIA
GSMA_IIE
9555H2AFYH2A.y | H2A/y | H2AF12M | MACROH2A1.1 | mH2A1 | macroH2A1.2H2A histone family member Y5q31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
6932TCF7TCF-1transcription factor 7 (T-cell specific, HMG-box)5q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
9685CLINT1CLINT | ENTH | EPN4 | EPNRclathrin interactor 15q33.3Association
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
3161HMMRCD168 | IHABP | RHAMMhyaluronan mediated motility receptor5q34CV:PGCnp
DMG:vanEijk_2014
GSMA_IIA
GSMA_IIE
4172MCM3HCC5 | P1-MCM3 | P1.h | RLFBminichromosome maintenance complex component 36p12CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
GSMA_IIE
Network
Ascano FMRP targets
23607CD2APCMSCD2-associated protein6p12CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
60481ELOVL5HELO1 | SCA38 | dJ483K16.1ELOVL fatty acid elongase 56p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
730101LOC730101-uncharacterized LOC7301016p12.2CV:PGCnp
896CCND3-cyclin D36p21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIE
Network
4800NFYACBF-A | CBF-B | HAP2 | NF-YAnuclear transcription factor Y subunit alpha6p21.3CV:GWASdb
DMG:Jaffe_2016
GSMA_I
GSMA_IIE
3833KIFC1HSET | KNSL2kinesin family member C16p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Ascano FMRP targets
7738ZNF184kr-ZNF3zinc finger protein 1846p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
10473HMGN4HMG17L3 | NHChigh mobility group nucleosomal binding domain 46p21.3CV:PGCnp
GSMA_I
6732SRPK1SFRSK1SRSF protein kinase 16p21.31CV:PGCnp
DMG:vanEijk_2014
GSMA_I
GSMA_IIE
6882TAF11MGC:15243 | PRO2134 | TAF2I | TAFII28TATA-box binding protein associated factor 116p21.31CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIE
80742PRR3CAT56proline rich 36p21.33CV:PGCnp
DMG:Wockner_2014
GSMA_I
7913DEKD6S231EDEK proto-oncogene6p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
8899PRPF4BPR4H | PRP4 | PRP4H | PRP4K | dJ1013A10.1pre-mRNA processing factor 4B6p25.2CV:PGCnp
GSMA_I
7272TTKCT96 | ESK | MPH1 | MPS1 | MPS1L1 | PYTTTK protein kinase6q14.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
4602MYBCmyb | c-myb | c-myb_CDS | efgMYB proto-oncogene, transcription factor6q22-q23CV:PGCnp
PMID:cooccur
25842ASF1ACGI-98 | CIA | HSPC146anti-silencing function 1A histone chaperone6q22.31CV:PGCnpChromatin Remodeling Genes
39ACAT2-acetyl-CoA acetyltransferase 26q25.3CV:PGCnp
PMID:cooccur
6950TCP1CCT-alpha | CCT1 | CCTa | D6S230E | TCP-1-alphat-complex 16q25.3-q26Association
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5425POLD2-polymerase (DNA) delta 2, accessory subunit7p13CV:PGCnp
DMG:Wockner_2014
94239H2AFVH2A.Z-2 | H2AVH2A histone family member V7p13CV:PGCnp
DNM:Xu_2012
CompositeSet
10652YKT6-YKT6 v-SNARE homolog (S. cerevisiae)7p15.1CV:PGCnp
GO_Annotation
11335CBX3HECH | HP1-GAMMA | HP1Hs-gammachromobox 37p15.2CV:PGCnp
PMID:cooccur
5189PEX1HMLR1 | PBD1A | PBD1B | ZWS | ZWS1peroxisomal biogenesis factor 17q21.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
8295TRRAPPAF350/400 | PAF400 | STAF40 | TR-AP | Tra1transformation/transcription domain-associated protein7q21.2-q22.1CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10926DBF4ASK | CHIF | DBF4A | ZDBF1DBF4 zinc finger7q21.3CV:PGCnp
Network
4176MCM7CDC47 | MCM2 | P1.1-MCM3 | P1CDC47 | P85MCM | PNAS146 | PPP1R104minichromosome maintenance complex component 77q21.3-q22.1DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
Ascano FMRP targets
349152DPY19L2P2-DPY19L2 pseudogene 27q22.1CV:PGCnp
DMG:Jaffe_2016
23165NUP205C7orf14nucleoporin 205kDa7q33CV:PGCnp
PMID:cooccur
835CASP2CASP-2 | ICH1 | NEDD-2 | NEDD2 | PPP1R57caspase 27q34-q35CV:PGCnp
2146EZH2ENX-1 | ENX1 | EZH1 | EZH2b | KMT6 | KMT6A | WVS | WVS2enhancer of zeste 2 polycomb repressive complex 2 subunit7q35-q36CV:PGCnp
DMG:Wockner_2014
Network
Chromatin Remodeling Genes
3638INSIG1CL-6 | CL6insulin induced gene 17q36CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
22976PAXIP1CAGF28 | CAGF29 | PACIP1 | PAXIP1L | PTIP | TNRC2PAX interacting protein 17q36CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
7486WRNRECQ3 | RECQL2 | RECQL3Werner syndrome RecQ like helicase8p12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
GSMA_IIE
CompositeSet
9258MFHAS1LRRC65 | MASL1malignant fibrous histiocytoma amplified sequence 18p23.1CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
2222FDFT1DGPT | ERG9 | SQS | SSfarnesyl-diphosphate farnesyltransferase 18p23.1-p22CV:PGCnp
DMG:Jaffe_2016
5591PRKDCDNA-PKcs | DNAPK | DNPK1 | HYRC | HYRC1 | IMD26 | XRCC7 | p350protein kinase, DNA-activated, catalytic polypeptide8q11CV:PGCnp
DMG:vanEijk_2014
DNM:McCarthy_2014
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
9760TOXTOX1thymocyte selection associated high mobility group box8q12.1CV:GWASdb
CV:PGCnp
PMID:cooccur
27067STAU239K2 | 39K3staufen double-stranded RNA binding protein 28q21.11CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
9791PTDSS1LMHD | PSS1 | PSSAphosphatidylserine synthase 18q22CV:PGCnp
51366UBR5DD5 | EDD | EDD1 | HYDubiquitin protein ligase E3 component n-recognin 58q22CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9134CCNE2CYCE2cyclin E28q22.1DMG:Jaffe_2016
5885RAD21CDLS4 | HR21 | HRAD21 | MCD1 | NXP1 | SCC1 | hHR21RAD21 cohesin complex component8q24CV:PGCnp
8667EIF3HEIF3S3 | eIF3-gamma | eIF3-p40eukaryotic translation initiation factor 3 subunit H8q24.11CV:PGCnp
Network
29894CPSF1CPSF160 | HSU37012 | P/cl.18cleavage and polyadenylation specific factor 18q24.23CV:PGCnpAscano FMRP targets
2189FANCGFAG | XRCC9Fanconi anemia complementation group G9p13CV:PGCnp
DMG:Jaffe_2016
9833MELKHPK38maternal embryonic leucine zipper kinase9p13.2CV:PGCnp
11168PSIP1DFS70 | LEDGF | PAIP | PSIP2 | p52 | p75PC4 and SFRS1 interacting protein 19p22.3CV:PGCnp
23230VPS13ACHAC | CHOREINvacuolar protein sorting 13 homolog A (S. cerevisiae)9q21CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
23137SMC5SMC5L1structural maintenance of chromosomes 59q21.12CV:PGCnp
1164CKS2CKSHS2CDC28 protein kinase regulatory subunit 29q22CV:PGCnp
DMG:Jaffe_2016
9128PRPF4HPRP4 | HPRP4P | PRP4 | Prp4p | RP70 | SNRNP60pre-mRNA processing factor 49q31-q33CV:PGCnp
Network
Ascano FMRP targets
11064CNTRLCEP1 | CEP110 | FAN | bA165P4.1centriolin9q33.2CV:PGCnp
8243SMC1ACDLS2 | DXS423E | SB1.8 | SMC1 | SMC1L1 | SMC1alpha | SMCBstructural maintenance of chromosomes 1AXp11.22-p11.21CV:PGCnp
PMID:cooccur
2742GLRA2GLRglycine receptor alpha 2Xp22.2CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
8473OGTHINCUT-1 | HRNT1 | O-GLCNACO-linked N-acetylglucosamine (GlcNAc) transferaseXq13Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
Potential synaptic genes
3251HPRT1HGPRT | HPRThypoxanthine phosphoribosyltransferase 1Xq26.1CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur