Search results: The pahtway p2938 has 390 genes in the original annotation. Currently, there are 242 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
6468FBXW4DAC | FBW4 | FBWD4 | SHFM3 | SHSF3F-box and WD repeat domain containing 410q24CV:PGCnp
DMG:Jaffe_2016
120ADD3ADDLadducin 310q25.2CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
55343SLC35C1CDG2C | FUCT1solute carrier family 35 member C111p11.2CV:PGCnp
DMG:Jaffe_2016
84364ARFGAP2IRZ | NBLA10535 | ZFP289 | ZNF289ADP ribosylation factor GTPase activating protein 211p11.2-p11.12CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
960CD44CDW44 | CSPG8 | ECMR-III | HCELL | HUTCH-I | IN | LHR | MC56 | MDU2 | MDU3 | MIC4 | Pgp1CD44 molecule (Indian blood group)11p13CV:GWASdb
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Network
54765TRIM44DIPB | HSA249128 | MC7tripartite motif containing 4411p13CV:GWAScat
CV:PGCnp
DMG:Wockner_2014
10083USH1CAIE-75 | DFNB18 | DFNB18A | NY-CO-37 | NY-CO-38 | PDZ-45 | PDZ-73 | PDZ-73/NY-CO-38 | PDZ73 | PDZD7C | ush1cpstUSH1 protein network component harmonin11p14.3CV:PGCnp
2965GTF2H1BTF2 | P62 | TFB1 | TFIIHgeneral transcription factor IIH subunit 111p15.1-p14CV:PGCnp
Network
PMID:cooccur
4928NUP98ADIR2 | NUP196 | NUP96nucleoporin 98kDa11p15.5CV:PGCnp
DNM:McCarthy_2014
CompositeSet
Darnell FMRP targets
187APLNRAGTRL1 | APJ | APJR | HG11apelin receptor11q12CV:PGCnp
3992FADS1D5D | FADS6 | FADSD5 | LLCDL1 | TU12fatty acid desaturase 111q12.2-q13.1DEG:Sanders_2013
PMID:cooccur
4926NUMA1NMP-22 | NUMAnuclear mitotic apparatus protein 111q13CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
Ascano FMRP targets
5091PCPCBpyruvate carboxylase11q13.4-q13.5CV:PGCnp
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
54733SLC35F2HSNOV1solute carrier family 35 member F211q22.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
3587IL10RACD210 | CD210a | CDW210A | HIL-10R | IL-10R1 | IL10Rinterleukin 10 receptor subunit alpha11q23Association
CV:PGCnp
DMG:vanEijk_2014
GSMA_I
PMID:cooccur
3606IL18IGIF | IL-18 | IL-1g | IL1F4interleukin 1811q23.1Association
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
63970TP53AIP1P53AIP1tumor protein p53 regulated apoptosis inducing protein 111q24CV:PGCnp
DMG:Wockner_2014
8082SSPNDAGA5 | KRAG | NSPN | SPN1 | SPN2sarcospan12p11.2CV:PGCnp
DMG:Nishioka_2013
Expression
GO_Annotation
55766H2AFJH2AJH2A histone family member J12p12.3CV:PGCnp
Expression
64375IKZF4EOS | ZNFN1A4IKAROS family zinc finger 412q13CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Network
6601SMARCC2BAF170 | CRACC2 | Rsc8SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 212q13.2CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
3221HOXC4HOX3 | HOX3E | cp19homeobox C412q13.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
3458IFNGIFG | IFIinterferon, gamma12q14CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
1368CPM-carboxypeptidase M12q14.3CV:PGCnp
PMID:cooccur
56890MDM1-Mdm1 nuclear protein12q15CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
CompositeSet
4673NAP1L1NAP1 | NAP1L | NRPnucleosome assembly protein 1 like 112q21.2CV:PGCnp
DEG:Maycox_2009
29080CCDC59BR22 | HSPC128 | TAP26coiled-coil domain containing 5912q21.31CV:PGCnp
DMG:Jaffe_2016
1634DCNCSCD | DSPG2 | PG40 | PGII | PGS2 | SLRR1Bdecorin12q21.33CV:PGCnp
Network
429ASCL1ASH1 | HASH1 | MASH1 | bHLHa46achaete-scute family bHLH transcription factor 112q23.2CV:PGCnp
GO_Annotation
PMID:cooccur
5053PAHPH | PKU | PKU1phenylalanine hydroxylase12q23.2CV:PGCnp
PMID:cooccur
1610DAODAAO | DAMOX | OXDAD-amino-acid oxidase12q24Association
Core
CV:PGCnp
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
8315BRAPBRAP2 | IMP | RNF52BRCA1 associated protein12q24CV:GWASdb
CV:PGCnp
CV:PheWAS
PMID:cooccur
8638OASLOASLd | TRIP-14 | TRIP14 | p59 OASL | p59-OASL | p59OASL2'-5'-oligoadenylate synthetase like12q24.2CV:PGCnp
8099CDK2AP1DOC1 | DORC1 | ST19 | doc-1 | p12DOC-1cyclin-dependent kinase 2 associated protein 112q24.31CV:PGCnp
LK:YES
PMID:cooccur
7637ZNF84HPF2zinc finger protein 8412q24.33DMG:Jaffe_2016
5042PABPC3PABP3 | PABPL3 | tPABPpoly(A) binding protein, cytoplasmic 313q12-q13CV:PGCnp
DMG:Wockner_2014
10464PIBF1C13orf24 | CEP90 | PIBFprogesterone immunomodulatory binding factor 113q22.1CV:PGCnp
64067NPAS3MOP6 | PASD6 | bHLHe12neuronal PAS domain protein 314q13.1Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
3895KTN1CG1 | KNT | MU-RMS-40.19kinectin 114q22.1CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.humanPSD
G2Cdb.humanPSP
5926ARID4ARBBP-1 | RBBP1 | RBP-1 | RBP1AT-rich interaction domain 4A14q23.1CV:PGCnp
8110DPF3BAF45C | CERD4double PHD fingers 314q24.2CV:PGCnp
54207KCNK10K2p10.1 | PPP1R97 | TREK-2 | TREK2potassium two pore domain channel subfamily K member 1014q31.3CV:GWASdb
CV:PGCnp
PMID:cooccur
23405DICER1DCR1 | Dicer | Dicer1e | HERNA | K12H4.8-LIKE | MNG1 | RMSE2dicer 1 ribonuclease III14q32.13CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
4236MFAP1-microfibrillar associated protein 115q15.3CV:PGCnpAscano FMRP targets
2200FBN1ACMICD | ECTOL1 | FBN | GPHYSD2 | MASS | MFS1 | OCTD | SGS | SSKS | WMS | WMS2fibrillin 115q21.1CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
4828NMB-neuromedin B15q22-qterCV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
23604DAPK2DRP-1 | DRP1death-associated protein kinase 215q22.31CV:PGCnp
Network
11214AKAP13AKAP-13 | AKAP-Lbc | ARHGEF13 | BRX | HA-3 | Ht31 | LBC | PRKA13 | PROTO-LB | PROTO-LBC | c-lbc | p47A-kinase anchoring protein 1315q25.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
1106CHD2EEOCchromodomain helicase DNA binding protein 215q26CV:PGCnp
9344TAOK2MAP3K17 | PSK | PSK1 | PSK1-BETA | TAO1 | TAO2TAO kinase 216p11.2CNV:YES
CV:GWASdb
CV:PGCnp
DMG:Montano_2016
GSMA_IIE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
5930RBBP6MY038 | P2P-R | PACT | RBQ-1 | SNAMAretinoblastoma binding protein 616p12.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIE
58986TMEM8AM83 | TMEM6 | TMEM8transmembrane protein 8A16p13.3CV:PGCnp
113ADCY7AC7adenylate cyclase 716q12.1CV:PGCnp
DNM:Xu_2012
GSMA_IIE
CompositeSet
1459CSNK2A2CK2A2 | CK2alpha' | CSNK2A1casein kinase 2 alpha 216q21CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
11060WWP2AIP2 | WWp2-likeWW domain containing E3 ubiquitin protein ligase 216q22.1CV:PGCnp
DMG:Wockner_2014
6137RPL13BBC1 | D16S444E | D16S44E | L13ribosomal protein L1316q24.3|17p11.2CV:PGCnp
Network
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
6720SREBF1SREBP-1c | SREBP1 | SREBP1a | bHLHd1sterol regulatory element binding transcription factor 117p11.2CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
2314FLIIFLI | FLIL | Fli1flightless I actin binding protein17p11.2CV:PGCnpAscano FMRP targets
30851TAX1BP3TIP-1 | TIP1Tax1 binding protein 317p13DMG:vanEijk_2014
Expression
5187PER1PER | RIGUI | hPERperiod circadian clock 117p13.1CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
22899ARHGEF15ARGEF15 | E5 | Ephexin5 | Vsm-RhoGEFRho guanine nucleotide exchange factor 1517p13.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
5338PLD2-phospholipase D217p13.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
9135RABEP1RAB5EP | RABPT5rabaptin, RAB GTPase binding effector protein 117p13.2CV:PGCnpINTRACELLULAR TRAFFICKING
G2Cdb.humanPSD
G2Cdb.humanPSP
51763INPP5KPPS | SKIPinositol polyphosphate-5-phosphatase K17p13.3CV:PGCnp
GO_Annotation
55178RNMTL1MRM3 | RMTL1RNA methyltransferase like 117p13.3CV:PGCnpAscano FMRP targets
26284ERAL1CEGA | ERA | ERA-W | ERAL1A | H-ERA | HERA-A | HERA-BEra-like 12S mitochondrial rRNA chaperone 117q11.2CV:PGCnp
DMG:Jaffe_2016
5469MED1CRSP1 | CRSP200 | DRIP205 | DRIP230 | PBP | PPARBP | PPARGBP | RB18A | TRAP220 | TRIP2mediator complex subunit 117q12CV:PGCnp
9570GOSR2Bos1 | EPM6 | GS27golgi SNAP receptor complex member 217q21CV:PGCnp
29893PSMC3IPGT198 | HOP2 | HUMGT198A | ODG3 | TBPIPPSMC3 interacting protein17q21.2DMG:Jaffe_2016
DMG:Wockner_2014
29916SNX11-sorting nexin 1117q21.32CV:PGCnp
1748DLX4BP1 | DLX7 | DLX8 | DLX9 | OFC15distal-less homeobox 417q21.33CV:PGCnp
DMG:Wockner_2014
8787RGS9PERRS | RGS9Lregulator of G-protein signaling 917q24.1CV:PGCnp
PMID:cooccur
29115SAP30BPHCNGP | HTRG | HTRPSAP30 binding protein17q25.1CV:PGCnp
DNM:Xu_2012
CompositeSet
23580CDC42EP4BORG4 | CEP4 | KAIA1777CDC42 effector protein 417q25.1CV:PGCnp
PMID:cooccur
7572ZNF24KOX17 | RSG-A | ZNF191 | ZSCAN3 | Zfp191zinc finger protein 2418q12CV:PGCnp
10892MALT1IMD12 | MLT | MLT1 | PCASP1MALT1 paracaspase18q21CV:PGCnp
DMG:Jaffe_2016
2531KDSRDHSR | FVT1 | SDR35C13-ketodihydrosphingosine reductase18q21.3CV:PGCnp
5205ATP8B1ATPIC | BRIC | FIC1 | ICP1 | PFIC | PFIC1ATPase phospholipid transporting 8B118q21.31CV:PGCnp
CV:PheWAS
4155MBP-myelin basic protein18q23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
9534ZNF254BMZF-5 | HD-ZNF1 | ZNF539 | ZNF91Lzinc finger protein 25419p12DMG:Wockner_2014
10755GIPC1C19orf3 | GIPC | GLUT1CBP | Hs.6454 | IIP-1 | NIP | RGS19IP1 | SEMCAP | SYNECTIIN | SYNECTIN | TIP-2GIPC PDZ domain containing family member 119p13.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
3718JAK3JAK-3 | JAK3_HUMAN | JAKL | L-JAK | LJAKJanus kinase 319p13.1CV:PGCnp
5143PDE4CDPDE1phosphodiesterase 4C19p13.11CV:PGCnp
PMID:cooccur
10365KLF2LKLFKruppel-like factor 219p13.11CV:PGCnp
PMID:cooccur
3727JUNDAP-1jun D proto-oncogene19p13.2CV:PGCnp
PMID:cooccur
4782NFICCTF | CTF5 | NF-I | NFInuclear factor I/C (CCAAT-binding transcription factor)19p13.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
2593GAMTCCDS2 | HEL-S-20 | PIG2 | TP53I2guanidinoacetate N-methyltransferase19p13.3CV:PGCnp
DEG:Sanders_2013
6915TBXA2RBDPLT13 | TXA2-Rthromboxane A2 receptor19p13.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
6929TCF3E2A | E47 | ITF1 | TCF-3 | VDIR | bHLHb21transcription factor 319p13.3CV:PGCnp
DMG:Montano_2016
DMG:vanEijk_2014
2077ERFCRS4 | PE-2 | PE2ETS2 repressor factor19q13CV:PGCnp
DMG:vanEijk_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
1050CEBPAC/EBP-alpha | CEBPCCAAT/enhancer binding protein alpha19q13.1CV:PGCnp
29946SERTAD3RBT1SERTA domain containing 319q13.2DMG:Jaffe_2016
11100HNRNPUL1E1B-AP5 | E1BAP5 | HNRPUL1heterogeneous nuclear ribonucleoprotein U-like 119q13.2CV:PGCnpCompositeSet
Darnell FMRP targets
2524FUT2B12QTL1 | SE | SEC2 | Se2 | sejfucosyltransferase 219q13.3CV:PGCnp
55769ZNF83HPF1 | ZNF816Bzinc finger protein 8319q13.3CV:PGCnp
DMG:Wockner_2014
10848PPP1R13LIASPP | NKIP1 | RAI | RAI4protein phosphatase 1 regulatory subunit 13 like19q13.32CV:PGCnp
DMG:Wockner_2014
6689SPIBSPI-BSpi-B transcription factor19q13.33CV:PGCnp
DNM:Xu_2012
CompositeSet
27300ZNF544-zinc finger protein 54419q13.43CV:PGCnp
DMG:Wockner_2014
965CD58LFA-3 | LFA3 | ag3CD58 molecule1p13CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GSMA_I
GSMA_IIA
1435CSF1CSF-1 | MCSFcolony stimulating factor 11p13.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
23443SLC35A3AMRSsolute carrier family 35 member A31p21CV:PGCnp
DMG:Wockner_2014
7812CSDE1D1S155E | UNRcold shock domain containing E11p22CV:PGCnp
GSMA_I
GSMA_IIA
2633GBP1-guanylate binding protein 11p22.2CV:PGCnp
PMID:cooccur
7398USP1UBPubiquitin specific peptidase 11p31.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
1376CPT2CPT1 | CPTASE | IIAE4carnitine palmitoyltransferase 21p32CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
7049TGFBR3BGCAN | betaglycantransforming growth factor beta receptor III1p33-p32CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
3652IPPKLHL27intracisternal A particle-promoted polypeptide1p34-p32CV:PGCnp
PMID:cooccur
1296COL8A2FECD | FECD1 | PPCD | PPCD2collagen type VIII alpha 21p34.2CV:PGCnp
8289ARID1AB120 | BAF250 | BAF250a | BM029 | C1orf4 | ELD | MRD14 | OSA1 | P270 | SMARCF1 | hELD | hOSA1AT-rich interaction domain 1A1p35.3CV:PGCnpCompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
2810SFNYWHASstratifin1p36.11CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
3570IL6RCD126 | IL-6R-1 | IL-6RA | IL6Q | IL6RA | IL6RQ | gp80interleukin 6 receptor1q21CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
5298PI4KBNPIK | PI4K-BETA | PI4K92 | PI4KBETA | PI4KIIIBETA | PIK4CBphosphatidylinositol 4-kinase beta1q21CV:PGCnp
DEG:Maycox_2009
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
9939RBM8ABOV-1A | BOV-1B | BOV-1C | C1DELq21.1 | DEL1q21.1 | MDS014 | RBM8 | RBM8B | TAR | Y14 | ZNRP | ZRNP1RNA binding motif protein 8A1q21.1CNV:YES
GSMA_I
GSMA_IIA
PMID:cooccur
6504SLAMF1CD150 | CDw150 | SLAMsignaling lymphocytic activation molecule family member 11q23.3CV:GWAScat
CV:GWASdb
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
PMID:cooccur
27252KLHL20KHLHX | KLEIP | KLHLXkelch like family member 201q25.1CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
9588PRDX61-Cys | AOP2 | HEL-S-128m | NSGPx | PRX | aiPLA2 | p29peroxiredoxin 61q25.1CV:PGCnp
DNM:Xu_2012
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9857CEP350CAP350 | GM133centrosomal protein 350kDa1q25.2CV:PGCnp
DMG:Jaffe_2016
140609NEK7-NIMA related kinase 71q31.3CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
1378CR1C3BR | C4BR | CD35 | KNcomplement component 3b/4b receptor 1 (Knops blood group)1q32CV:PGCnp
DMG:vanEijk_2014
PMID:cooccur
5929RBBP5RBQ3 | SWD1retinoblastoma binding protein 51q32CV:PGCnp
DNM:Gulsuner_2013
Chromatin Remodeling Genes
29937NENFCIR2 | SCIRP10 | SPUFneudesin neurotrophic factor1q32.3CV:PGCnp
DMG:Jaffe_2016
55740ENAHENA | MENA | NDPP1enabled homolog (Drosophila)1q42.12CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
5933RBL1CP107 | PRB1 | p107retinoblastoma-like 120q11.2CV:PGCnp
DMG:Jaffe_2016
23051ZHX3TIX1zinc fingers and homeoboxes 320q12CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
5740PTGISCYP8 | CYP8A1 | PGIS | PTGIprostaglandin I2 (prostacyclin) synthase20q13.13CV:GWAScat
CV:PGC128
CV:PGCnp
DNM:Ambalavanan_2016
55738ARFGAP1ARF1GAP | HRIHFB2281ADP ribosylation factor GTPase activating protein 120q13.33CV:PGCnpEXOCYTOSIS
351APPAAA | ABETA | ABPP | AD1 | APPI | CTFgamma | CVAP | PN-II | PN2amyloid beta precursor protein21q21.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
3588IL10RBCDW210B | CRF2-4 | CRFB4 | D21S58 | D21S66 | IL-10R2interleukin 10 receptor subunit beta21q22.11CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
23181DIP2AC21orf106 | DIP2disco interacting protein 2 homolog A21q22.3CV:GWASdb
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
7122CLDN5AWAL | BEC1 | CPETRL1 | TMVCFclaudin 522q11.21Association
CNV:YES
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
8220DGCR14DGCR13 | DGS-H | DGS-I | DGSH | DGSI | ES2 | Es2elDiGeorge syndrome critical region gene 1422q11.21|22q11.2Association
CNV:YES
CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
2781GNAZ-G protein subunit alpha z22q11.22GSMA_I
Network
PMID:cooccur
G-PROTEIN RELAY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
23780APOL2APOL-II | APOL3apolipoprotein L222q12CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
6948TCN2D22S676 | D22S750 | II | TC | TC II | TC-2 | TC2 | TCIItranscobalamin 222q12.2CV:PGCnp
GSMA_I
PMID:cooccur
3985LIMK2-LIM domain kinase 222q12.2CV:PGCnp
DMG:Nishioka_2013
GSMA_I
PMID:cooccur
2130EWSR1EWS | EWS-FLI1 | bK984G1.4EWS RNA binding protein 122q12.2CV:PGCnp
GSMA_I
Network
5155PDGFBIBGC5 | PDGF-2 | PDGF2 | SIS | SSV | c-sisplatelet derived growth factor subunit B22q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
2033EP300KAT3B | RSTS2 | p300E1A binding protein p30022q13.2CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Chromatin Remodeling Genes
23264ZC3H7BRoXaNzinc finger CCCH-type containing 7B22q13.2CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
23774BRD1BRL | BRPF1 | BRPF2bromodomain containing 122q13.33Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
23654PLXNB2MM1 | Nbla00445 | PLEXB2 | dJ402G11.3plexin B222q13.33CV:PGCnp
GO_Annotation
Ascano FMRP targets
7840ALMS1ALSSALMS1, centrosome and basal body associated protein2p13CV:PGCnp
DNM:Fromer_2014
Expression
CompositeSet
Ascano FMRP targets
2202EFEMP1DHRD | DRAD | FBLN3 | FBNL | FIBL-3 | MLVT | MTLV | S1-5EGF containing fibulin-like extracellular matrix protein 12p16CV:PGCnp
PMID:cooccur
23433RHOQARHQ | HEL-S-42 | RASL7A | TC10 | TC10Aras homolog family member Q2p21CV:PGCnp
5610EIF2AK2EIF2AK1 | PKR | PPP1R83 | PRKReukaryotic translation initiation factor 2 alpha kinase 22p22-p21CV:PGCnp
PMID:cooccur
678ZFP36L2BRF2 | ERF-2 | ERF2 | RNF162C | TIS11DZFP36 ring finger protein-like 22p22.3-p21CV:PGCnp
DMG:Montano_2016
51594NBASILFS2 | NAG | SOPHneuroblastoma amplified sequence2p24CV:PGCnpAscano FMRP targets
2736GLI2CJS | HPE9 | PHS2 | THP1 | THP2GLI family zinc finger 22q14CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
1615DARSHBSL | aspRSaspartyl-tRNA synthetase2q21.3GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
55660PRPF40AFBP-11 | FBP11 | FLAF1 | FNBP3 | HIP-10 | HIP10 | HYPA | NY-REN-6 | Prp40pre-mRNA processing factor 40 homolog A2q23.3CV:PGCnp
Expression
GSMA_IIA
Network
Ascano FMRP targets
6670SP3SPR2Sp3 transcription factor2q31CV:PGCnp
Network
PMID:cooccur
7273TTNCMD1G | CMH9 | CMPD4 | EOMFC | HMERF | LGMD2J | MYLK5 | TMDtitin2q31CV:PGCnp
DNM:Fromer_2014
DNM:McCarthy_2014
Network
CompositeSet
3655ITGA6CD49f | ITGA6B | VLA-6integrin subunit alpha 62q31.1CV:PGCnp
DMG:Nishioka_2013
DNM:Ambalavanan_2016
DNM:Xu_2012
Expression
PMID:cooccur
CompositeSet
6744SSFA2CS-1 | CS1 | KRAP | SPAG13sperm specific antigen 22q31.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
51540SCLYSCL | hSCLselenocysteine lyase2q37.3PMID:cooccur
23272FAM208AC3orf63 | RAP140 | se89-1family with sequence similarity 208 member A3p14.3CV:PGCnp
55193PBRM1BAF180 | PB1polybromo 13p21CV:PGCnp
DMG:Wockner_2014
LK:YES
PMID:cooccur
Chromatin Remodeling Genes
7869SEMA3BLUCA-1 | SEMA5 | SEMAA | SemA | semaVsemaphorin 3B3p21.3DMG:Wockner_2014
GO_Annotation
5576PRKAR2APKR2 | PRKAR2protein kinase cAMP-dependent type II regulatory subunit alpha3p21.3-p21.2CV:PGCnp
DMG:Wockner_2014
Network
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5859QARSGLNRS | MSCCA | PRO2195glutaminyl-tRNA synthetase3p21.31CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Ascano FMRP targets
51368TEX264ZSIG11testis expressed 2643p21.31CV:PGCnp
10869USP19ZMYND9ubiquitin specific peptidase 193p21.31CV:PGCnpAscano FMRP targets
5745PTH1RPFE | PTHR | PTHR1parathyroid hormone 1 receptor3p22-p21.1CV:PGCnp
DMG:Wockner_2014
Network
2803GOLGA4CRPF46 | GCP2 | GOLG | MU-RMS-40.18 | p230golgin A43p22-p21.3CV:PGCnp
GSMA_I
8850KAT2BCAF | P/CAF | PCAFlysine acetyltransferase 2B3p24CV:GWAScat
CV:GWASdb
CV:PGCnp
Chromatin Remodeling Genes
9779TBC1D5-TBC1 domain family member 53p24.3CV:GWASdb
CV:PGCnp
GSMA_I
131566DCBLD2CLCP1 | ESDNdiscoidin, CUB and LCCL domain containing 23q12.1|3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
64422ATG3APG3 | APG3-LIKE | APG3L | PC3-96autophagy related 33q13.2CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
2932GSK3B-glycogen synthase kinase 3 beta3q13.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_WM
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3693ITGB5-integrin subunit beta 53q21.2CV:PGCnp
Network
25937WWTR1TAZWW domain containing transcription regulator 13q23-q24CV:PGCnp
185AGTR1AG2S | AGTR1B | AT1 | AT1AR | AT1B | AT1BR | AT1R | AT2R1 | HAT1Rangiotensin II receptor type 13q24CV:PGCnp
DMG:Jaffe_2016
57205ATP10DATPVDATPase phospholipid transporting 10D (putative)4p12CV:GWASdb
CV:PGCnp
116984ARAP2CENTD1 | PARXArfGAP with RhoGAP domain, ankyrin repeat and PH domain 24p14CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
7096TLR1CD281 | TIL | TIL. LPRS5 | rsc786toll like receptor 14p14CV:PGCnp
PMID:cooccur
3516RBPJAOS3 | CBF1 | IGKJRB | IGKJRB1 | KBF2 | RBP-J | RBPJK | RBPSUH | SUH | cslrecombination signal binding protein for immunoglobulin kappa J region4p15.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
64151NCAPGCAPG | CHCG | NY-MEL-3 | YCG1non-SMC condensin I complex subunit G4p15.33CV:PGCnpAscano FMRP targets
2261FGFR3ACH | CD333 | CEK2 | HSFGFR3EX | JTK4fibroblast growth factor receptor 34p16.3CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
10098TSPAN5NET-4 | NET4 | TM4SF9 | TSPAN-5tetraspanin 54q23CV:PGCnp
DMG:Jaffe_2016
839CASP6MCH2caspase 64q25CV:PGCnp
Network
Ascano FMRP targets
51176LEF1LEF-1 | TCF10 | TCF1ALPHA | TCF7L3lymphoid enhancer binding factor 14q25CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
51574LARP7ALAZS | HDCMA18P | PIP7SLa ribonucleoprotein domain family member 74q25CV:PGCnp
DNM:Xu_2012
CompositeSet
4651MYO10-myosin X5p15.1CV:GWASdb
CV:PGCnp
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
1462VCANCSPG2 | ERVR | GHAP | PG-M | WGN | WGN1versican5q14.3CV:PGCnp
DMG:Jaffe_2016
Expression
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
51752ERAP1A-LAP | ALAP | APPILS | ARTS-1 | ARTS1 | ERAAP | ERAAP1 | PILS-AP | PILSAPendoplasmic reticulum aminopeptidase 15q15CV:PGCnp
DMG:Jaffe_2016
831CASTBS-17 | PLACKcalpastatin5q15CV:PGCnp
PMID:cooccur
Ascano FMRP targets
6949TCOF1MFD1 | TCS | TCS1 | treacletreacle ribosome biogenesis factor 15q32CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
51302CYP39A1-cytochrome P450 family 39 subfamily A member 16p12.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
988CDC5LCDC5 | CDC5-LIKE | CEF1 | PCDC5RP | dJ319D22.1cell division cycle 5 like6p21CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
Network
860RUNX2AML3 | CBF-alpha-1 | CBFA1 | CCD | CCD1 | CLCD | OSF-2 | OSF2 | PEA2aA | PEBP2aArunt related transcription factor 26p21CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
5429POLHRAD30 | RAD30A | XP-V | XPVpolymerase (DNA) eta6p21.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
10695CNPY3CAG4A | ERDA5 | PRAT4A | TNRC5canopy FGF signaling regulator 36p21.1DMG:vanEijk_2014
GO_Annotation
GSMA_IIE
3113HLA-DPA1DP(W3) | DP(W4) | HLA-DP1A | HLADP | HLASB | PLT1major histocompatibility complex, class II, DP alpha 16p21.3CV:PGCnp
GSMA_I
PMID:cooccur
4855NOTCH4INT3notch 46p21.3Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
10475TRIM38RNF15 | RORETtripartite motif containing 386p21.3CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GSMA_I
63940GPSM3AGS4 | C6orf9 | G18 | G18.1a | G18.1b | G18.2 | NG1G-protein signaling modulator 36p21.3CV:GWASdb
CV:PGCnp
GSMA_I
6257RXRBDAUDI6 | H-2RIIBP | NR2B2 | RCoR-1retinoid X receptor beta6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
1192CLIC1G6 | NCC27chloride intracellular channel 16p21.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_I
Network
6204RPS10DBA9 | S10ribosomal protein S106p21.31CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
G2Cdb.humanPSD
G2Cdb.humanPSP
5617PRLGHA1prolactin6p22.3CV:PGCnp
GSMA_I
PMID:cooccur
3400ID4IDB4 | bHLHb27inhibitor of DNA binding 4, HLH protein6p22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
2766GMPRGMPR 1 | GMPR1guanosine monophosphate reductase6p23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
8899PRPF4BPR4H | PRP4 | PRP4H | PRP4K | dJ1013A10.1pre-mRNA processing factor 4B6p25.2CV:PGCnp
GSMA_I
5238PGM3AGM1 | IMD23 | PAGM | PGM 3phosphoglucomutase 36q14.1-q15CV:PGCnp
8732RNGTTCAP1A | HCE | HCE1 | hCAPRNA guanylyltransferase and 5'-phosphatase6q16CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
11231SEC63DNAJC23 | ERdj2 | PRO2507 | SEC63LSEC63 homolog, protein translocation regulator6q21CV:GWAScat
CV:GWASdb
CV:PGCnp
2534FYNSLK | SYN | p59-FYNFYN proto-oncogene, Src family tyrosine kinase6q21CV:PGCnp
DMG:vanEijk_2014
Expression
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
3910LAMA4CMD1JJ | LAMA3 | LAMA4*-1laminin subunit alpha 46q21CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
3908LAMA2LAMMlaminin subunit alpha 26q22-q23CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
DNM:Xu_2012
GO_Annotation
PMID:cooccur
CompositeSet
2697GJA1AVSD3 | CMDR | CX43 | EKVP | GJAL | HLHS1 | HSS | ODDD | PPKCAgap junction protein alpha 16q22.31CV:PGCnp
DMG:Wockner_2014
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
6446SGK1SGKserum/glucocorticoid regulated kinase 16q23CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
9444QKIHqk | QK | QK1 | QK3 | hqkIQKI, KH domain containing, RNA binding6q26CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Darnell FMRP targets
64759TNS3TEM6 | TENS1tensin 37p12.3CV:PGCnpCompositeSet
Darnell FMRP targets
94239H2AFVH2A.Z-2 | H2AVH2A histone family member V7p13CV:PGCnp
DNM:Xu_2012
CompositeSet
23658LSM5YER146WLSM5 homolog, U6 small nuclear RNA and mRNA degradation associated7p14.3CV:PGCnp
Network
10142AKAP9AKAP-9 | AKAP350 | AKAP450 | CG-NAP | HYPERION | LQT11 | MU-RMS-40.16A | PPP1R45 | PRKA9 | YOTIAOA-kinase anchoring protein 97q21-q22CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
10926DBF4ASK | CHIF | DBF4A | ZDBF1DBF4 zinc finger7q21.3CV:PGCnp
Network
6733SRPK2SFRSK2SRSF protein kinase 27q22-q31.1CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
10135NAMPT1110035O14Rik | PBEF | PBEF1 | VF | VISFATINnicotinamide phosphoribosyltransferase7q22.3CV:GWASdb
CV:PGCnp
800CALD1CDM | H-CAD | HCAD | L-CAD | LCAD | NAG22caldesmon 17q33CV:PGCnp
DMG:Wockner_2014
Expression
Network
6422SFRP1FRP | FRP-1 | FRP1 | FrzA | SARP2secreted frizzled-related protein 18p11.21Association
CV:PGCnp
PMID:cooccur
6867TACC1Ga55transforming acidic coiled-coil containing protein 18p11.22CV:PGCnp
DMG:Wockner_2014
1191CLUAAG4 | APO-J | APOJ | CLI | CLU1 | CLU2 | KUB1 | NA1/NA2 | SGP-2 | SGP2 | SP-40 | TRPM-2 | TRPM2clusterin8p21-p12CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5862RAB2ALHX | RAB2RAB2A, member RAS oncogene family8q12.1CV:PGCnp
Network
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
64089SNX16-sorting nexin 168q21.13CV:GWASdb
CV:PGCnp
8895CPNE3CPN3 | PRO1071copine 38q21.3CV:PGCnp
DMG:Jaffe_2016
Expression
PMID:cooccur
284ANGPT1AGP1 | AGPT | ANG1angiopoietin 18q23.1CV:GWASdb
CV:PGCnp
GO_Annotation
7553ZNF7HF.16 | KOX4 | zf30zinc finger protein 78q24CV:PGCnp
DMG:Wockner_2014
4982TNFRSF11BOCIF | OPG | PDB5 | TR1tumor necrosis factor receptor superfamily member 11b8q24CV:PGCnp
CV:PheWAS
29894CPSF1CPSF160 | HSU37012 | P/cl.18cleavage and polyadenylation specific factor 18q24.23CV:PGCnpAscano FMRP targets
8629JRKJH8 | jerkyJrk helix-turn-helix protein8q24.3CV:PGCnp
10210TOPORSLUN | P53BP3 | RP31 | TP53BPLtopoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase9p21CV:PGCnp
DMG:Wockner_2014
80173IFT74CCDC2 | CMG-1 | CMG1intraflagellar transport 749p21.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
3442IFNA5IFN-alpha-5 | IFN-alphaG | INA5 | INFA5 | leIF Ginterferon, alpha 59p22CV:PGCnp
19ABCA1ABC-1 | ABC1 | CERP | HDLDT1 | TGDATP binding cassette subfamily A member 19q31.1CV:GWASdb
CV:PGCnp
DEG:Maycox_2009
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
5742PTGS1COX1 | COX3 | PCOX1 | PES-1 | PGG/HS | PGHS-1 | PGHS1 | PHS1 | PTGHSprostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)9q32-q33.3CV:PGCnp
PMID:cooccur
727C5C5D | C5a | C5b | CPAMD4 | ECLZBcomplement component 59q33-q34CV:PGCnp
GO_Annotation
PMID:cooccur
8243SMC1ACDLS2 | DXS423E | SB1.8 | SMC1 | SMC1L1 | SMC1alpha | SMCBstructural maintenance of chromosomes 1AXp11.22-p11.21CV:PGCnp
PMID:cooccur
3561IL2RGCD132 | CIDX | IL-2RG | IMD4 | P64 | SCIDX | SCIDX1interleukin 2 receptor subunit gammaXq13.1PMID:cooccur
680BRS3BB3bombesin like receptor 3Xq26.3CV:PGCnp
Expression
PMID:cooccur
Potential synaptic genes
55879GABRQTHETAgamma-aminobutyric acid type A receptor theta subunitXq28CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
83259PCDH11YPCDH-PC | PCDH22 | PCDHX | PCDHYprotocadherin 11 Y-linkedYp11.2PMID:cooccur