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| GeneID |
10713
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| Symbol |
USP39
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| Synonyms |
CGI-21|HSPC332|MGC75069|SAD1
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| Description |
ubiquitin specific peptidase 39 |
| See related |
HGNC:20071|MIM:611594|Ensembl:ENSG00000168883|HPRD:07165| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
2p11.2 |
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| Gene set name |
Method of gene set |
Evidence |
Info |
| GSMA_I | genome scan meta-analysis | Psr: 0.0004 | |
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| General Gene Expression (microarray) ? |
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| Gene Expression in Brain Regions (new) |
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| Top co-expressed genes in Brain Regions (new) |
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| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| SASH3 | 0.58 | 0.48 | | |
| CD68 | 0.55 | 0.47 | | |
| HCK | 0.55 | 0.46 | | |
| SYK | 0.53 | 0.46 | | |
| FOLR2 | 0.52 | 0.41 | | |
| NCKAP1L | 0.52 | 0.48 | | |
| ITGB2 | 0.51 | 0.49 | | |
| CYTH4 | 0.49 | 0.44 | | |
| SIGLEC7 | 0.48 | 0.34 | | |
| CD37 | 0.48 | 0.43 | | |
Top 10 negatively co-expressed genes | | AF347015.18 | -0.19 | -0.17 | | |
| MT-CO2 | -0.18 | -0.15 | | |
| AC010300.1 | -0.18 | -0.15 | | |
| NOSTRIN | -0.18 | -0.12 | | |
| EDN1 | -0.17 | -0.06 | | |
| CXCL2 | -0.17 | -0.13 | | |
| ANP32C | -0.17 | -0.12 | | |
| F2RL3 | -0.17 | -0.08 | | |
| IL32 | -0.16 | -0.13 | | |
| AF347015.26 | -0.16 | -0.13 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005515 | protein binding | IPI | | 17353931 |
| GO:0004221 | ubiquitin thiolesterase activity | IEA | | - |
| GO:0008270 | zinc ion binding | IEA | | - |
| GO:0046872 | metal ion binding | IEA | | - |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0000245 | spliceosome assembly | TAS | | 10022888 |
| GO:0006397 | mRNA processing | TAS | | 10022888 |
| GO:0008380 | RNA splicing | TAS | | 10022888 |
| GO:0006511 | ubiquitin-dependent protein catabolic process | IEA | | - |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005622 | intracellular | IEA | | - |
| GO:0005634 | nucleus | IEA | | - |
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- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
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