Search results: The pahtway p4081 has 435 genes in the original annotation. Currently, there are 318 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
256297PTF1APACA | PAGEN2 | PTF1-p48 | bHLHa29pancreas specific transcription factor, 1a10p12.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
84457PHYHIPL-phytanoyl-CoA 2-hydroxylase interacting protein like10q11CV:PGCnp
DMG:Jaffe_2016
1103CHATCHOACTASE | CMS1A | CMS1A2 | CMS6choline O-acetyltransferase10q11.2Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTRANSMITTER METABOLISM
3363HTR75-HT75-hydroxytryptamine receptor 710q21-q24ADT:Sun_2012
Association
CV:PGCnp
DNM:Xu_2012
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
CompositeSet
50674NEUROG3Atoh5 | Math4B | NGN-3 | bHLHa7 | ngn3neurogenin 310q21.3CV:GWASdb
CV:PGCnp
GO_Annotation
2894GRID1GluD1glutamate ionotropic receptor delta type subunit 110q22Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
3778KCNMA1BKTM | KCa1.1 | MaxiK | SAKCA | SLO | SLO-ALPHA | SLO1 | bA205K10.1 | mSLO1potassium calcium-activated channel subfamily M alpha 110q22.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
EXCITABILITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
10718NRG3HRG3 | pro-NRG3neuregulin 310q23.1Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
NEUROTROPHIN SIGNALING
5950RBP4MCOPCB10 | RDCCASretinol binding protein 410q23.33CV:PGCnp
PMID:cooccur
2253FGF8AIGF | FGF-8 | HBGF-8 | HH6 | KAL6fibroblast growth factor 810q24CV:PGCnp
PMID:cooccur
10660LBX1HPX-6 | HPX6 | LBX1H | homeoboxladybird homeobox 110q24CV:PGCnp
GO_Annotation
5076PAX2FSGS7 | PAPRSpaired box 210q24CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
159296NKX2-3CSX3 | NK2.3 | NKX2.3 | NKX2C | NKX4-3NK2 homeobox 310q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
26507CNNM1ACDP1 | CLP-1cyclin and CBS domain divalent metal cation transport mediator 110q24.2CV:GWASdb
CV:PGCnp
G2Cdb.humanPSD
G2Cdb.humanPSP
83401ELOVL3CIG-30 | CIG30ELOVL fatty acid elongase 310q24.32CV:PGCnp
6571SLC18A2SVAT | SVMT | VAT2 | VMAT2solute carrier family 18 member A210q25ADT:Sun_2012
Association
CV:PGCnp
DNM:Gulsuner_2013
GR_Ng
PMID:cooccur
NEUROTRANSMITTER METABOLISM
84504NKX6-2GTX | NKX6.2 | NKX6BNK6 homeobox 210q26CV:PGCnp
GSMA_IIA
PMID:cooccur
10570DPYSL4CRMP3 | DRP-4 | ULIP4dihydropyrimidinase like 410q26CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
282974STK32CPKE | YANK3serine/threonine kinase 32C10q26.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
256536TCERG1L-transcription elongation regulator 1 like10q26.3CV:GWASdb
CV:PGCnp
GSMA_IIA
4004LMO1RBTN1 | RHOM1 | TTG1LIM domain only 111p15CV:GWASdb
CV:PGCnp
PMID:cooccur
84867PTPN5PTPSTEP | STEP | STEP61protein tyrosine phosphatase, non-receptor type 511p15.1CV:PGCnp
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
9152SLC6A5GLYT-2 | GLYT2 | HKPX3 | NET1solute carrier family 6 member 511p15.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
6833ABCC8ABC36 | HHF1 | HI | HRINS | MRP8 | PHHI | SUR | SUR1 | SUR1delta2 | TNDM2ATP binding cassette subfamily C member 811p15.1CV:GWASdb
CV:PGCnp
10418SPON1VSGP/F-spondin | f-spondinspondin 111p15.2CV:GWASdb
CV:PGCnp
PMID:cooccur
4654MYOD1MYF3 | MYOD | PUM | bHLHc1myogenic differentiation 111p15.4CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
PMID:cooccur
887CCKBRCCK-B | CCK2R | GASRcholecystokinin B receptor11p15.4CV:GWASdb
CV:PGCnp
PMID:cooccur
3784KCNQ1ATFB1 | ATFB3 | JLNS1 | KCNA8 | KCNA9 | KVLQT1 | Kv1.9 | Kv7.1 | LQT | LQT1 | RWS | SQT2 | WRSpotassium voltage-gated channel subfamily Q member 111p15.5CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
PMID:cooccur
1815DRD4D4DRdopamine receptor D411p15.5ADT:Sun_2012
Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
9024BRSK2C11orf7 | PEN11B | SAD1 | SADA | STK29BR serine/threonine kinase 211p15.5CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
114900C1QTNF4CTRP4 | ZACRP4C1q and tumor necrosis factor related protein 411q11CV:PGCnp
DMG:Wockner_2014
Expression
6712SPTBN2GTRAP41 | SCA5 | SCAR14spectrin beta, non-erythrocytic 211q13CV:PGCnpSTRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9379NRXN2-neurexin 211q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
Darnell FMRP targets
51083GALETL8 | GAL-GMAP | GALN | GLNN | GMAPgalanin/GMAP prepropeptide11q13.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
283208P4HA3-prolyl 4-hydroxylase subunit alpha 311q13.4CV:PGCnp
25884CHRDL2BNF1 | CHL2chordin-like 211q14CV:PGCnp
7704ZBTB16PLZF | ZNF145zinc finger and BTB domain containing 1611q23.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
GSMA_I
25833POU2F3Epoc-1 | OCT-11 | OCT11 | OTF-11 | PLA-1 | PLA1 | Skn-1aPOU class 2 homeobox 311q23.3CV:PGCnp
GSMA_I
220323OAFNS5ATP13TP2out at first homolog11q23.3CV:PGCnp
GSMA_I
64137ABCG4WHITE2ATP binding cassette subfamily G member 411q23.3CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
GSMA_I
CompositeSet
6330SCN4BATFB17 | LQT10 | Navbeta4sodium voltage-gated channel beta subunit 411q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
EXCITABILITY
79864C11orf63-chromosome 11 open reading frame 6311q24.1CV:PGCnp
GSMA_I
341359SYT10-synaptotagmin 1012p11.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
55711FAR2HEL-S-81 | MLSTD1 | SDR10E2fatty acyl-CoA reductase 212p11.22CV:PGCnp
56341PRMT8HRMT1L3 | HRMT1L4protein arginine methyltransferase 812p13.3CV:PGCnpChromatin Remodeling Genes
654429LRTM2-leucine-rich repeats and transmembrane domains 212p13.33CV:PGCnp
DMG:Wockner_2014
6334SCN8ACERIII | CIAT | EIEE13 | MED | NaCh6 | Nav1.6 | PN4sodium voltage-gated channel alpha subunit 812q13CV:PGCnp
GO_Annotation
PMID:cooccur
EXCITABILITY
CompositeSet
Darnell FMRP targets
50846DHHGDXYM | HHG-3 | SRXY7desert hedgehog12q13.1CV:PGCnp
PMID:cooccur
94ACVRL1ACVRLK1 | ALK-1 | ALK1 | HHT | HHT2 | ORW2 | SKR3 | TSR-Iactivin A receptor like type 112q13.13CV:PGCnp
DMG:Wockner_2014
3855KRT7CK7 | K2C7 | K7 | SCLkeratin 712q13.13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3228HOXC12HOC3F | HOX3 | HOX3Fhomeobox C1212q13.13CV:PGCnp
DMG:Jaffe_2016
3225HOXC9HOX3 | HOX3Bhomeobox C912q13.3DMG:Jaffe_2016
23426GRIP1GRIPglutamate receptor interacting protein 112q14.3CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_mGluR5
Ascano FMRP targets
Potential synaptic genes
5787PTPRBHPTP-BETA | HPTPB | PTPB | R-PTP-BETA | VEPTPprotein tyrosine phosphatase, receptor type B12q15CV:GWASdb
CV:PGCnp
29953TRHDEPAP-II | PGPEP2 | TRH-DEthyrotropin releasing hormone degrading enzyme12q21.1CV:PGCnp
9671WSCD2-WSC domain containing 212q23.3CV:GWASdb
CV:PGCnp
Expression
64211LHX5-LIM homeobox 512q24CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
6910TBX5HOST-box 512q24.1CV:PGCnp
DMG:Jaffe_2016
11211FZD10CD350 | FZ-10 | Fz10 | FzE7 | hFz10frizzled class receptor 1012q24.33CV:GWASdb
CV:PGCnp
51761ATP8A2ATP | ATPIB | CAMRQ4 | IB | ML-1ATPase phospholipid transporting 8A213q12CV:GWAScat
CV:GWASdb
CV:PGCnp
Ascano FMRP targets
10804GJB6CX30 | DFNA3 | DFNA3B | DFNB1B | ECTD2 | ED2 | EDH | HED | HED2gap junction protein beta 613q12CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
9365KL-klotho13q12CV:GWASdb
CV:PGCnp
PMID:cooccur
3651PDX1GSF | IDX-1 | IPF1 | IUF1 | MODY4 | PAGEN1 | PDX-1 | STF-1pancreatic and duodenal homeobox 113q12.1CV:PGCnp
PMID:cooccur
23077MYCBP2Myc-bp2 | PAM | PhrMYC binding protein 2, E3 ubiquitin protein ligase13q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
23026MYO16MYAP3 | MYR8 | Myo16b | NYAP3 | PPP1R107myosin XVI13q33.3CV:GWAScat
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
728215FAM155A-family with sequence similarity 155 member A13q33.3CV:GWASdb
CV:PGCnp
6751SSTR1SRIF-2 | SS-1-R | SS1-R | SS1Rsomatostatin receptor 114q13CV:PGCnp
GO_Annotation
PMID:cooccur
64067NPAS3MOP6 | PASD6 | bHLHe12neuronal PAS domain protein 314q13.1Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
83851SYT16CHR14SYT | SYT14L | Strep14 | syt14r | yt14rsynaptotagmin 1614q23.2CV:PGCnp
DMG:Wockner_2014
5228PGFD12S1900 | PGFL | PLGF | PlGF-2 | SHGC-10760placental growth factor14q24.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
646658SYNDIG1LCAPUCIN | DSPC1 | IFITMD4 | TMEM90Asynapse differentiation inducing 1 like14q24.3CV:PGCnp
1735DIO35DIII | D3 | DIOIII | TXDI3deiodinase, iodothyronine, type III14q32CV:PGCnp
PMID:cooccur
10858CYP46A1CP46 | CYP46cytochrome P450 family 46 subfamily A member 114q32.1CV:PGCnp
GO_Annotation
PMID:cooccur
123036TC2NC14orf47 | C2CD1 | MTAC2D1 | Tac2-Ntandem C2 domains, nuclear14q32.12CV:GWASdb
CV:PGCnp
2558GABRA5-gamma-aminobutyric acid type A receptor alpha5 subunit15q12CNV:YES
CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
Potential synaptic genes
100131244ANKRD63-ankyrin repeat domain 6315q15.1CV:PGCnp
4058LTKTYK1leukocyte receptor tyrosine kinase15q15.1-q21.1GO_Annotation
PMID:cooccur
8482SEMA7ACD108 | CDw108 | H-SEMA-K1 | H-Sema-L | JMH | SEMAK1 | SEMALsemaphorin 7A (John Milton Hagen blood group)15q22.3-q23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
10391CORO2BCLIPINCcoronin 2B15q23CV:PGCnp
DMG:Jaffe_2016
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
390598SKOR1CORL1 | FUSSEL15 | LBXCOR1SKI family transcriptional corepressor 115q23CV:PGCnp
DMG:Jaffe_2016
54852PAQR5MPRGprogestin and adipoQ receptor family member V15q23CV:GWAScat
CV:GWASdb
CV:PGCnp
1136CHRNA3LNCR2 | NACHRA3 | PAOD2cholinergic receptor nicotinic alpha 3 subunit15q24CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
PMID:cooccur
4916NTRK3GP145-TrkC | TRKC | gp145(trkC)neurotrophic tyrosine kinase, receptor, type 315q25CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
176ACANAGC1 | AGCAN | CSPG1 | CSPGCP | MSK16 | SEDKaggrecan15q26.1CV:PGCnpG2Cdb.human_mGluR5
220ALDH1A3ALDH1A6 | ALDH6 | MCOP8 | RALDH3aldehyde dehydrogenase 1 family member A315q26.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
9956HS3ST230ST2 | 3OST2heparan sulfate-glucosamine 3-sulfotransferase 216p12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
PMID:cooccur
58986TMEM8AM83 | TMEM6 | TMEM8transmembrane protein 8A16p13.3CV:PGCnp
6755SSTR5SS-5-Rsomatostatin receptor 516p13.3PMID:cooccur
64711HS3ST63-OST-6 | HS3ST5heparan sulfate-glucosamine 3-sulfotransferase 616p13.3CV:PGCnp
113ADCY7AC7adenylate cyclase 716q12.1CV:PGCnp
DNM:Xu_2012
GSMA_IIE
CompositeSet
85407NKD1Naked1naked cuticle homolog 1 (Drosophila)16q12.1CV:PGCnp
GSMA_IIE
869CBLN1-cerebellin 1 precursor16q12.1CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
6530SLC6A2NAT1 | NET | NET1 | SLC6A5solute carrier family 6 member 216q12.2ADT:Sun_2012
CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
3291HSD11B2AME | AME1 | HSD11K | HSD2 | SDR9C3hydroxysteroid (11-beta) dehydrogenase 216q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
PMID:cooccur
6236RRADRAD | RAD1 | REM3Ras-related associated with diabetes16q22CV:PGCnp
Network
170692ADAMTS18ADAMTS21 | KNO2 | MMCATADAM metallopeptidase with thrombospondin type 1 motif 1816q23CV:PGCnp
DNM:Gulsuner_2013
54550NECAB2EFCBP2N-terminal EF-hand calcium binding protein 216q23.3CV:PGCnp
DMG:Wockner_2014
2294FOXF1ACDMPV | FKHL5 | FREAC1forkhead box F116q24DMG:Jaffe_2016
3394IRF8H-ICSBP | ICSBP | ICSBP1 | IMD32A | IMD32B | IRF-8interferon regulatory factor 816q24.1CV:PGCnp
79007DBNDD1-dysbindin (dystrobrevin binding protein 1) domain containing 116q24.3CV:PGCnp
57338JPH3CAGL237 | HDL2 | JP-3 | JP3 | TNRC22junctophilin 316q24.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
644815FAM83GPAWS1family with sequence similarity 83 member G17p11.2CV:PGCnpAscano FMRP targets
1366CLDN7CEPTRL2 | CLDN-7 | CPETRL2 | Hs.84359 | claudin-1claudin 717p13.1CV:PGCnp
GO_Annotation
51087YBX2CONTRIN | CSDA3 | DBPC | MSY2Y-box binding protein 217p13.1CV:PGCnp
239ALOX1212-LOX | 12S-LOX | LOG12arachidonate 12-lipoxygenase17p13.1DMG:vanEijk_2014
PMID:cooccur
8447DOC2BDOC2BLdouble C2-like domains, beta17p13.3CV:PGCnp
GO_Annotation
EXOCYTOSIS
246ALOX1512-LOX | 15-LOX-1 | 15LOX-1arachidonate 15-lipoxygenase17p13.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
84440RAB11FIP4RAB11-FIP4RAB11 family interacting protein 4 (class II)17q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
124842TMEM132EDFNB99transmembrane protein 132E17q12CV:PGCnpAscano FMRP targets
91608RASL10BRRP17 | VTS58635RAS like family 10 member B17q12CV:PGCnp
DMG:Jaffe_2016
10882C1QL1C1QRF | C1QTNF14 | CRFcomplement component 1, q subcomponent-like 117q21CV:GWASdb
CV:PGCnp
5697PYYPYY-I | PYY1peptide YY17q21.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1394CRHR1CRF-R | CRF-R-1 | CRF-R1 | CRF1 | CRFR-1 | CRFR1 | CRH-R-1 | CRH-R1 | CRHR | CRHR1Lcorticotropin releasing hormone receptor 117q21.31CV:PGCnp
PMID:cooccur
GPCR SIGNALLING
8631SKAP1HEL-S-81p | SCAP1 | SKAP55src kinase associated phosphoprotein 117q21.32CV:PGCnp
DMG:Wockner_2014
30009TBX21T-PET | T-bet | TBET | TBLYMT-box 2117q21.32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
9241NOGSYM1 | SYNS1 | SYNS1Anoggin17q22CV:PGCnp
CV:PheWAS
GO_Annotation
8913CACNA1GCa(V)T.1 | Cav3.1 | NBR13 | SCA42calcium voltage-gated channel subunit alpha1 G17q22CV:PGCnpCompositeSet
Darnell FMRP targets
Potential synaptic genes
1636ACEACE1 | CD143 | DCP | DCP1 | ICH | MVCD3angiotensin I converting enzyme17q23.3CV:PGCnp
Network
PMID:cooccur
81033KCNH6ERG-2 | ERG2 | HERG2 | Kv11.2 | hERG-2potassium voltage-gated channel subfamily H member 617q23.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
27092CACNG4-calcium voltage-gated channel auxiliary subunit gamma 417q24CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
CompositeSet
Potential synaptic genes
7077TIMP2CSC-21K | DDC8TIMP metallopeptidase inhibitor 217q25CV:PGCnp
DMG:vanEijk_2014
DNM:Guipponi_2014
GO_Annotation
Network
PMID:cooccur
2905GRIN2CGluN2C | NMDAR2C | NR2Cglutamate ionotropic receptor NMDA type subunit 2C17q25.1GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
Potential synaptic genes
146713RBFOX3FOX-3 | FOX3 | HRNBP3 | NEUNRNA binding protein, fox-1 homolog (C. elegans) 317q25.3CV:PGCnp
DMG:Jaffe_2016
23136EPB41L34.1B | DAL-1 | DAL1erythrocyte membrane protein band 4.1-like 318p11.32CV:PGCnp
DMG:Wockner_2014
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
56853CELF4BRUNOL4 | CELF-4CUGBP, Elav-like family member 418q12CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
2922GRPBN | GRP-10 | preproGRP | proGRPgastrin releasing peptide18q21.1-q21.32CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
4772NFATC1NF-ATC | NF-ATc1.2 | NFAT2 | NFATcnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 118q23CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Montano_2016
Network
25789TMEM59LBSMAP | C19orf4transmembrane protein 59 like19p12CV:PGCnp
DMG:Jaffe_2016
9244CRLF1CISS | CISS1 | CLF | CLF-1 | NR6 | zcytor5cytokine receptor-like factor 119p12CV:PGCnp
DMG:Wockner_2014
1311COMPEDM1 | EPD1 | MED | PSACH | THBS5cartilage oligomeric matrix protein19p13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3640INSL3RLF | RLNL | ley-I-Linsulin like 319p13.11CV:PGCnp
1943EFNA2ELF-1 | EPLG6 | HEK7-L | LERK-6 | LERK6ephrin-A219p13.3CV:PGCnp
116444GRIN3BGluN3B | NR3Bglutamate ionotropic receptor NMDA type subunit 3B19p13.3CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
390874ONECUT3OC3one cut homeobox 319p13.3CV:PGCnp
10683DLL3SCDO1delta-like 3 (Drosophila)19q13CV:PGCnp
DMG:Wockner_2014
56301SLC7A10ASC1 | HASC-1 | asc-1solute carrier family 7 member 1019q13.1CV:PGCnp
PMID:cooccur
148014TTC9B-tetratricopeptide repeat domain 9B19q13.2DMG:Wockner_2014
114783LMTK3LMR3 | PPP1R101 | TYKLM3lemur tyrosine kinase 319q13.33CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
3748KCNC3KSHIIID | KV3.3 | SCA13potassium voltage-gated channel subfamily C member 319q13.33CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
4808NHLH2HEN2 | NSCL2 | bHLHa34nescient helix-loop-helix 21p12-p11CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
7482WNT2BWNT13wingless-type MMTV integration site family member 2B1p13CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
148281SYT6sytVIsynaptotagmin 61p13.2CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
CANABINOID
DOPAMINE
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
3752KCND3BRGDA9 | KCND3L | KCND3S | KSHIVB | KV4.3 | SCA19 | SCA22potassium voltage-gated channel subfamily D member 31p13.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
388662SLC6A17MRT48 | NTT4solute carrier family 6 member 171p13.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GO_Annotation
GSMA_I
NEUROTRANSMITTER METABOLISM
CompositeSet
Darnell FMRP targets
3749KCNC4C1orf30 | HKSHIIIC | KSHIIIC | KV3.4potassium voltage-gated channel subfamily C member 41p21CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
GSMA_I
EXCITABILITY
26289AK5AK6adenylate kinase 51p31CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
CompositeSet
27022FOXD3AIS1 | Genesis | HFH2 | VAMAS2forkhead box D31p31.3GSMA_IIA
PMID:cooccur
3061HCRTR1OX1Rhypocretin receptor 11p33CV:PGCnp
GO_Annotation
PMID:cooccur
1298COL9A2DJ39G22.4 | EDM2 | MED | STL5collagen type IX alpha 21p33-p32CV:PGCnp
DMG:Wockner_2014
9132KCNQ4DFNA2 | DFNA2A | KV7.4potassium voltage-gated channel subfamily Q member 41p34CV:PGCnp
PMID:cooccur
1296COL8A2FECD | FECD1 | PPCD | PPCD2collagen type VIII alpha 21p34.2CV:PGCnp
284654RSPO1CRISTIN3 | RSPOR-spondin 11p34.3CV:PGCnp
DMG:Jaffe_2016
339488TFAP2EAP2Etranscription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)1p34.3CV:PGCnp
347735SERINC2FKSG84 | PRO0899 | TDE2 | TDE2Lserine incorporator 21p35.1CV:PGCnp
DMG:Wockner_2014
252995FNDC5FRCP2 | irisinfibronectin type III domain containing 51p35.1CV:PGCnp
3362HTR65-HT6 | 5-HT6R5-hydroxytryptamine receptor 61p36-p35ADT:Sun_2012
Association
CV:PGCnp
GO_Annotation
PMID:cooccur
388610TRNP1C1orf225 | TNRPTMF1-regulated nuclear protein 11p36.11CV:PGCnp
163933FAM43B-family with sequence similarity 43 member B1p36.12CV:PGCnp
DMG:Wockner_2014
84966IGSF21-immunoglobin superfamily member 211p36.13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
2563GABRDEIG10 | EJM7 | GEFSP5gamma-aminobutyric acid type A receptor delta subunit1p36.3CV:PGCnp
GO_Annotation
PMID:cooccur
7161TP73P73tumor protein p731p36.3CV:PGCnp
DMG:Wockner_2014
3352HTR1D5-HT1D | HT1DA | HTR1DA | HTRL | RDC45-hydroxytryptamine receptor 1D1p36.3-p34.3ADT:Sun_2012
CV:PGCnp
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
SEROTONIN
26038CHD5CHD-5chromodomain helicase DNA binding protein 51p36.31CV:PGCnp
DNM:Guipponi_2014
CompositeSet
Darnell FMRP targets
388585HES5bHLHb38hes family bHLH transcription factor 51p36.32CV:PGCnp
GO_Annotation
PMID:cooccur
9659PDE4DIPCMYA2 | MMGLphosphodiesterase 4D interacting protein1q12CNV:YES
DNM:Fromer_2014
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
3645INSRRIRRinsulin receptor-related receptor1q21-q23CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_I
GSMA_IIA
CompositeSet
1141CHRNB2EFNL3 | nAChRB2cholinergic receptor nicotinic beta 2 subunit1q21.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
LIGAND GATED ION SIGNALING
4009LMX1ALMX1 | LMX1.1LIM homeobox transcription factor 1 alpha1q24.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
7827NPHS2PDCN | SRN1NPHS2 podocin1q25.2CV:PGCnp
DMG:Nishioka_2013
63827BCANBEHAB | CSPG7brevican1q31CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
127833SYT2CMS7 | MYSPC | SytIIsynaptotagmin 21q32.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
3756KCNH1EAG | EAG1 | Kv10.1 | TMBTS | ZLS1 | h-eag | hEAG1potassium voltage-gated channel subfamily H member 11q32.2CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
55509BATF3JDP1 | JUNDM1 | SNFTbasic leucine zipper ATF-like transcription factor 31q32.3CV:PGCnp
DMG:Jaffe_2016
89780WNT3A-wingless-type MMTV integration site family member 3A1q42CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
375057C1orf95-chromosome 1 open reading frame 951q42.12CV:PGCnp
DMG:Wockner_2014
148641SLC35F3-solute carrier family 35 member F31q42.2CV:PGCnp
DMG:Wockner_2014
25893TRIM58BIA2tripartite motif containing 581q44CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
644524NKX2-4NKX2.4 | NKX2DNK2 homeobox 420p11.22CV:PGCnp
57593EBF4COE4 | O/E-4early B-cell factor 420p13CV:GWASdb
CV:PGCnp
140679SLC32A1VGAT | VIAATsolute carrier family 32 member 120q11.23CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
128434VSTM2LC20orf102 | dJ1118M15.2V-set and transmembrane domain containing 2 like20q11.23CV:PGCnp
DMG:Wockner_2014
90187EMILIN3C20orf130 | EMILIN5 | dJ620E11.4elastin microfibril interfacer 320q12CV:PGCnp
DMG:Wockner_2014
9935MAFBKRML | MCTOv-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B20q12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
11122PTPRTRPTPrhoprotein tyrosine phosphatase, receptor type T20q12-q13CV:PGCnpCompositeSet
Darnell FMRP targets
1591CYP24A1CP24 | CYP24 | HCAI | P450-CC24cytochrome P450 family 24 subfamily A member 120q13CV:PGCnp
PMID:cooccur
4923NTSR1NTRneurotensin receptor 1 (high affinity)20q13CV:PGCnp
GO_Annotation
PMID:cooccur
64405CDH22C20orf25 | dJ998H6.1cadherin 2220q13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
60598KCNK15K2p15.1 | KCNK11 | KCNK14 | KT3.3 | TASK-5 | TASK5 | dJ781B1.1potassium two pore domain channel subfamily K member 1520q13.12CV:PGCnp
PMID:cooccur
4318MMP9CLG4B | GELB | MANDP2 | MMP-9matrix metallopeptidase 920q13.12CV:PGCnp
PMID:cooccur
5740PTGISCYP8 | CYP8A1 | PGIS | PTGIprostaglandin I2 (prostacyclin) synthase20q13.13CV:GWAScat
CV:PGC128
CV:PGCnp
DNM:Ambalavanan_2016
3785KCNQ2BFNC | BFNS1 | EBN | EBN1 | EIEE7 | ENB1 | HNSPC | KCNA11 | KV7.2 | KVEBN1potassium voltage-gated channel subfamily Q member 220q13.3CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
50861STMN3SCLIPstathmin 320q13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
140628GATA5GATAS | bB379O24.1GATA binding protein 520q13.33CV:PGCnp
DMG:Wockner_2014
1826DSCAMCHD2 | CHD2-42 | CHD2-52Down syndrome cell adhesion molecule21q22.2CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
DNM:Xu_2012
GO_Annotation
CompositeSet
Darnell FMRP targets
10317B3GALT5B3GalT-V | B3GalTx | B3T5 | GLCT5 | beta-1,3-GalTase 5 | beta-3-Gx-T5 | beta3Gal-T5Beta-1,3-galactosyltransferase 521q22.3CV:GWASdb
CV:PGCnp
326AIREAIRE1 | APECED | APS1 | APSI | PGA1autoimmune regulator21q22.3CV:GWASdb
CV:PGCnp
29947DNMT3L-DNA (cytosine-5-)-methyltransferase 3-like21q22.3CV:PGCnp
PMID:cooccur
Chromatin Remodeling Genes
150209AIFM3AIFLapoptosis inducing factor, mitochondria associated 322q11.21CNV:YES
CV:PGCnp
GSMA_I
65078RTN4RNGR | NOGORreticulon 4 receptor22q11.21Association
CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
135ADORA2AA2aR | ADORA2 | RDC8adenosine A2a receptor22q11.23GO_Annotation
GSMA_I
Network
PMID:cooccur
GPCR SIGNALLING
23544SEZ6L-seizure related 6 homolog (mouse)-like22q12.1CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
4744NEFHNFHneurofilament, heavy polypeptide22q12.2CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
7477WNT7B-wingless-type MMTV integration site family member 7B22q13CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
3761KCNJ4HIR | HIRK2 | HRK1 | IRK-3 | IRK3 | Kir2.3potassium voltage-gated channel subfamily J member 422q13.1CV:PGCnp
PMID:cooccur
EXCITABILITY
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
23467NPTXRNPRneuronal pentraxin receptor22q13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
CompositeSet
Darnell FMRP targets
Potential synaptic genes
8911CACNA1ICav3.3 | ca(v)3.3calcium voltage-gated channel subunit alpha1 I22q13.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
PMID:cooccur
CompositeSet
Darnell FMRP targets
638BIKBIP1 | BP4 | NBKBCL2-interacting killer22q13.31CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
56666PANX2PX2 | hPANX2pannexin 222q13.33CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
2016EMX1-empty spiracles homeobox 12p13.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
150726FBXO41FBX41F-box protein 412p13.2CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
8291DYSFFER1L1 | LGMD2B | MMD1dysferlin2p13.3CV:PGCnp
DMG:Wockner_2014
3899AFF3LAF4 | MLLT2-likeAF4/FMR2 family member 32q11.2-q12CV:PGCnp
DMG:Wockner_2014
GSMA_I
CompositeSet
Darnell FMRP targets
8808IL1RL2IL-1Rrp2 | IL-36R | IL1R-rp2 | IL1RRP2interleukin 1 receptor like 22q12CV:PGCnp
GSMA_I
344558SH3RF3POSH2 | SH3MD4SH3 domain containing ring finger 32q13CV:GWASdb
CV:PGCnp
Ascano FMRP targets
57628DPP10DPL2 | DPPY | DPRP-3 | DPRP3dipeptidyl peptidase like 102q14.1CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
6344SCTRSRsecretin receptor2q14.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
PMID:cooccur
Potential synaptic genes
11249NXPH2NPH2neurexophilin 22q22.1CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
GSMA_I
GSMA_IIA
344191EVX2EVX-2even-skipped homeobox 22q31.1CV:PGCnp
DMG:Jaffe_2016
3233HOXD4HHO.C13 | HOX-5.1 | HOX4 | HOX4B | Hox-4.2homeobox D42q31.1CV:PGCnpPotential synaptic genes
3235HOXD9HOX4 | HOX4C | Hox-4.3 | Hox-5.2homeobox D92q31.1CV:PGCnp
DMG:Jaffe_2016
3237HOXD11HOX4 | HOX4Fhomeobox D112q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3238HOXD12HOX4Hhomeobox D122q31.1CV:PGCnp
4760NEUROD1BETA2 | BHF-1 | MODY6 | NEUROD | bHLHa3neuronal differentiation 12q32CV:PGCnp
GO_Annotation
Network
PMID:cooccur
91752ZNF804AC2orf10zinc finger protein 804A2q32.1Core
CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
Network
PMID:cooccur
3549IHHBDA1 | HHG2indian hedgehog2q33-q35CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
54738FEVHSRNAFEV | PET-1FEV, ETS transcription factor2q36GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
10267RAMP1-receptor (G protein-coupled) activity modifying protein 12q36-q37.1CV:PGCnp
DMG:Jaffe_2016
9427ECEL1DA5D | DINE | ECEX | XCEendothelin converting enzyme-like 12q37.1CV:PGCnp
GO_Annotation
55079FEZF2FEZ | FEZL | FKSG36 | TOF | ZFP312 | ZNF312FEZ family zinc finger 23p14.2CV:PGCnp
GO_Annotation
PMID:cooccur
776CACNA1DCACH3 | CACN4 | CACNL1A2 | CCHL1A2 | Cav1.3 | PASNA | SANDDcalcium voltage-gated channel subunit alpha1 D3p14.3CV:PGCnp
PMID:cooccur
EXCITABILITY
SEROTONIN
CompositeSet
Potential synaptic genes
6331SCN5ACDCD2 | CMD1E | CMPD2 | HB1 | HB2 | HBBD | HH1 | ICCD | IVF | LQT3 | Nav1.5 | PFHB1 | SSS1 | VF1sodium voltage-gated channel alpha subunit 53p21CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
PMID:cooccur
EXCITABILITY
55799CACNA2D3HSA272268calcium voltage-gated channel auxiliary subunit alpha2delta 33p21.1CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1795DOCK3MOCA | PBPdedicator of cytokinesis 33p21.2CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
9254CACNA2D2CACNA2Dcalcium voltage-gated channel auxiliary subunit alpha2delta 23p21.3CV:PGCnp
DMG:Wockner_2014
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
8927BSNZNF231bassoon presynaptic cytomatrix protein3p21.31CV:PGCnp
DMG:Wockner_2014
DNM:Awadalla_2010
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
25924MYRIPSLAC2-C | SLAC2Cmyosin VIIA and Rab interacting protein3p22.1CV:GWASdb
CV:PGCnp
EXOCYTOSIS
885CCK-cholecystokinin3p22.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
NEUROTROPHIN SIGNALING
131375LYZL4LYC4 | LYZAlysozyme like 43p22.1CV:GWAScat
CV:GWASdb
CV:PGCnp
5021OXTROT-Roxytocin receptor3p25CV:PGCnp
Expression
PMID:cooccur
Potential synaptic genes
6529SLC6A1GABATHG | GABATR | GAT1 | MAEsolute carrier family 6 member 13p25.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
NEUROTRANSMITTER METABOLISM
CompositeSet
Darnell FMRP targets
491ATP2B2PMCA2 | PMCA2a | PMCA2iATPase plasma membrane Ca2+ transporting 23p25.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
51560RAB6B-RAB6B, member RAS oncogene family3q22.1CV:PGCnp
DMG:Jaffe_2016
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
2047EPHB1ELK | EPHT2 | Hek6 | NETEPH receptor B13q22.2CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
64084CLSTN2ALC-GAMMA | CDHR13 | CS2 | CSTN2 | alcagammacalsyntenin 23q23CV:GWASdb
CV:PGCnp
GO_Annotation
7545ZIC1CRS6 | ZIC | ZNF201Zic family member 13q24CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
22865SLITRK3-SLIT and NTRK like family member 33q26.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
59345GNB4CMTD1FG protein subunit beta 43q26.33CV:PGCnp
PMID:cooccur
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
2257FGF12FGF12B | FHF1fibroblast growth factor 123q28CV:PGCnp
GO_Annotation
2557GABRA4-gamma-aminobutyric acid type A receptor alpha4 subunit4p12CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
55203LGI2LGIL2leucine-rich repeat LGI family member 24p15.2CV:PGCnp
9353SLIT2SLIL3 | Slit-2slit guidance ligand 24p15.2CV:GWASdb
CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
Ascano FMRP targets
Potential synaptic genes
152ADRA2CADRA2L2 | ADRA2RL2 | ADRARL2 | ALPHA2CARadrenoceptor alpha 2C4p16ADT:Sun_2012
CV:PGCnp
PMID:cooccur
1816DRD5DBDR | DRD1B | DRD1L2dopamine receptor D54p16.1ADT:Sun_2012
Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
DOPAMINE
170825GSX2GSH2GS homeobox 24q12CV:PGCnp
DMG:Wockner_2014
GO_Annotation
2250FGF5HBGF-5 | Smag-82 | TCMGLYfibroblast growth factor 54q21CV:PGCnp
GO_Annotation
4825NKX6-1NKX6.1 | NKX6ANK6 homeobox 14q21.33CV:PGCnp
GO_Annotation
PMID:cooccur
84109QRFPRAQ27 | GPR103 | SP9155pyroglutamylated RFamide peptide receptor4q27CV:PGCnp
PMID:cooccur
1047CLGN-calmegin4q28.3-q31.1DMG:Jaffe_2016
2891GRIA2GLUR2 | GLURB | GluA2 | GluR-K2 | HBGR2glutamate ionotropic receptor AMPA type subunit 24q32.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanARC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
2668GDNFATF1 | ATF2 | HFB1-GDNF | HSCR3glial cell derived neurotrophic factor5p13.1-p12Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
50805IRX4IRXA3iroquois homeobox 45p15.3CV:PGCnp
DMG:Jaffe_2016
6550SLC9A3NHE-3 | NHE3solute carrier family 9 member A35p15.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
85409NKD2Naked2naked cuticle homolog 2 (Drosophila)5p15.3CV:PGCnp
DMG:Wockner_2014
79192IRX1IRX-5 | IRXA1iroquois homeobox 15p15.3CV:PGCnp
DNM:McCarthy_2014
3673ITGA2BR | CD49B | GPIa | HPA-5 | VLA-2 | VLAA2integrin subunit alpha 25q11.2CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
Ascano FMRP targets
9607CARTPTCARTCART prepropeptide5q13.2CV:PGCnp
GO_Annotation
PMID:cooccur
4762NEUROG1AKA | Math4C | NEUROD3 | bHLHa6 | ngn1neurogenin 15q23-q31Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
56134PCDHAC2PCDH-ALPHA-C2protocadherin alpha subfamily C, 25q31CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_I
CompositeSet
Darnell FMRP targets
7045TGFBIBIGH3 | CDB1 | CDG2 | CDGG1 | CSD | CSD1 | CSD2 | CSD3 | EBMD | LCD1transforming growth factor beta induced5q31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
9547CXCL14BMAC | BRAK | KEC | KS1 | MIP-2g | MIP2G | NJAC | SCYB14C-X-C motif chemokine ligand 145q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
23105FSTL4-follistatin like 45q31.1CV:GWASdb
CV:PGCnp
GSMA_I
2676GFRA3GDNFR3GDNF family receptor alpha 35q31.1-q31.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
PMID:cooccur
84249PSD2EFA6Cpleckstrin and Sec7 domain containing 25q31.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
GSMA_I
134265AFAP1L1-actin filament associated protein 1 like 15q32CV:PGCnp
Expression
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
345630FBLL1-fibrillarin-like 15q34CV:PGCnp
GSMA_IIA
1482NKX2-5CHNG5 | CSX | CSX1 | HLHS2 | NKX2.5 | NKX2E | NKX4-1 | VSD3NK2 homeobox 55q34CV:PGCnp
DMG:Nishioka_2013
GSMA_IIA
255426RASGEF1C-RasGEF domain family member 1C5q35.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
9509ADAMTS2ADAM-TS2 | ADAMTS-2 | ADAMTS-3 | NPI | PC I-NP | PCI-NP | PCINP | PCPNI | PNPIADAM metallopeptidase with thrombospondin type 1 motif 25qterCV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
PMID:cooccur
221400TDRD6CT41.2 | NY-CO-45 | SPATA36 | TDR2 | bA446F17.4tudor domain containing 66p12.3CV:PGCnp
GSMA_IIE
441151TMEM151BC6orf137 | TMEM193 | bA444E17.5transmembrane protein 151B6p21.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIE
CompositeSet
Darnell FMRP targets
29993PACSIN1SDPIprotein kinase C and casein kinase substrate in neurons 16p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Potential synaptic genes
654BMP6VGR | VGR1bone morphogenetic protein 66p24-p23CV:PGCnp
GSMA_I
PMID:cooccur
59336PRDM13MU-MB-20.220 | PFM10PR domain 136q16.2CV:PGCnp
DMG:Wockner_2014
245806VGLL2VGL2 | VITO1vestigial like family member 26q22.1CV:PGCnp
DMG:Wockner_2014
79632FAM184AC6orf60family with sequence similarity 184 member A6q22.31CV:PGCnp
2911GRM1GPRC1A | MGLU1 | MGLUR1 | PPP1R85 | SCAR13glutamate receptor, metabotropic 16q24CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
GPCR SIGNALLING
METABOTROPIC GLUTAMATE RECEPTOR
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
2887GRB10GRB-IR | Grb-10 | IRBP | MEG1 | RSSgrowth factor receptor bound protein 107p12.2CV:GWAScat
CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
816CAMK2BCAM2 | CAMK2 | CAMKBcalcium/calmodulin-dependent protein kinase II beta7p14.3-p14.1CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
221895JAZF1TIP27 | ZNF802JAZF zinc finger 17p15.2-p15.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
392862GRID2IPDELPHILINGrid2 interacting protein7p22.1CV:PGCnp
DMG:Wockner_2014
340260UNCXUNCX4.1UNC homeobox7p22.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
GO_Annotation
4885NPTX2NARP | NP-II | NP2neuronal pentraxin 27q21.3-q22.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
Potential synaptic genes
43ACHEACEE | ARACHE | N-ACHE | YTacetylcholinesterase (Yt blood group)7q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
5649RELNETL7 | LIS2 | PRO1598 | RLreelin7q22Association
Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
375612LHFPL3LHFPL4lipoma HMGIC fusion partner-like 37q22.2CV:PGCnp
3663IRF5SLEB10interferon regulatory factor 57q32CV:PGCnp
PMID:cooccur
6469SHHHHG1 | HLP3 | HPE3 | MCOPCB5 | SMMCI | TPT | TPTPSsonic hedgehog7q36CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
3757KCNH2ERG-1 | ERG1 | H-ERG | HERG | HERG1 | Kv11.1 | LQT2 | SQT1potassium voltage-gated channel subfamily H member 27q36.1ADT:Sun_2012
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
2636GBX1Huh-17gastrulation brain homeobox 17q36.1DMG:Wockner_2014
GO_Annotation
286ANK1ANK | SPH1 | SPH2ankyrin 18p11.1CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Expression
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
64236PDLIM2MYSTIQUE | SLIMPDZ and LIM domain 28p21.3GSMA_I
GSMA_IIA
GSMA_IIE
9228DLGAP2DAP2 | SAPAP2discs large homolog associated protein 28p23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
252969NEIL2NEH2 | NEI2nei like DNA glycosylase 28p23.1CV:PGCnp
DMG:Jaffe_2016
2626GATA4ASD2 | TACHD | TOF | VSD1GATA binding protein 48p23.1-p22CV:PGCnp
PMID:cooccur
3786KCNQ3BFNC2 | EBN2 | KV7.3potassium voltage-gated channel subfamily Q member 38q24CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
4856NOVCCN3 | IBP-9 | IGFBP-9 | IGFBP9 | NOVhnephroblastoma overexpressed8q24.1PMID:cooccur
83482SCRT1SCRT | ZNF898scratch family zinc finger 18q24.3CV:PGCnp
DMG:Wockner_2014
401498TMEM215-transmembrane protein 2159p21.1CV:GWASdb
CV:PGCnp
2731GLDCGCE | GCSP | HYGN1glycine dehydrogenase (decarboxylating)9p22CV:GWASdb
CV:PGCnp
56033BARX1-BARX homeobox 19q12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
1306COL15A1-collagen type XV alpha 19q21-q22CV:PGCnp
DNM:Fromer_2014
CompositeSet
9568GABBR2GABABR2 | GPR51 | GPRC3B | HG20 | HRIHFB2099gamma-aminobutyric acid type B receptor subunit 29q22.1-q22.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
4010LMX1BLMX1.2 | NPS1LIM homeobox transcription factor 1 beta9q33.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
10319LAMC3OCCMlaminin subunit gamma 39q34.12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
84929FIBCD1-fibrinogen C domain containing 19q34.12CV:GWASdb
CV:PGCnp
GO_Annotation
389813C9orf172-chromosome 9 open reading frame 1729q34.3DMG:Wockner_2014
DNM:Guipponi_2014
CompositeSet
170302ARXCT121 | EIEE1 | ISSX | MRX29 | MRX32 | MRX33 | MRX36 | MRX38 | MRX43 | MRX54 | MRX76 | MRX87 | MRXS1 | PRTSaristaless related homeoboxXp21.3CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
3897L1CAMCAML1 | CD171 | HSAS | HSAS1 | MASA | MIC5 | N-CAM-L1 | N-CAML1 | NCAM-L1 | S10 | SPG1L1 cell adhesion moleculeXq28Association
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
CompositeSet