Search results: The pahtway p2765 has 366 genes in the original annotation. Currently, there are 238 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
89846FGD3ZFYVE5FYVE, RhoGEF and PH domain containing 3-CV:GWASdb
CV:PGCnp
Expression
GO_Annotation
288ANK3ANKYRIN-G | MRT37ankyrin 3, node of Ranvier (ankyrin G)10q21CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
11155LDB3CMD1C | CMH24 | CMPD3 | CYPHER | LDB3Z1 | LDB3Z4 | LVNC3 | MFM4 | ORACLE | PDLIM6 | ZASPLIM domain binding 310q22.3-q23.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
3988LIPACESD | LALlipase A, lysosomal acid type10q23.2-q23.3CV:GWASdb
CV:PGCnp
5950RBP4MCOPCB10 | RDCCASretinol binding protein 410q23.33CV:PGCnp
PMID:cooccur
9060PAPSS2ATPSK2 | BCYM4 | SK23'-phosphoadenosine 5'-phosphosulfate synthase 210q24CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
Expression
1244ABCC2ABC30 | CMOAT | DJS | MRP2 | cMRPATP binding cassette subfamily C member 210q24CV:PGCnp
DMG:Wockner_2014
8729GBF1ARF1GEFgolgi brefeldin A resistant guanine nucleotide exchange factor 110q24CV:PGCnpCompositeSet
Darnell FMRP targets
Ascano FMRP targets
4601MXI1MAD2 | MXD2 | MXI | bHLHc11MAX interactor 1, dimerization protein10q24-q25CV:GWASdb
CV:PGCnp
355FASALPS1A | APO-1 | APT1 | CD95 | FAS1 | FASTM | TNFRSF6Fas cell surface death receptor10q24.1CV:PGCnp
Expression
GR_Ng
GR_WM
Network
PMID:cooccur
6001RGS10-regulator of G-protein signaling 1010q25CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
5791PTPREHPTPE | PTPE | R-PTP-EPSILONprotein tyrosine phosphatase, receptor type E10q26CV:PGCnp
GSMA_IIA
PMID:cooccur
10062NR1H3LXR-a | LXRA | RLD-1nuclear receptor subfamily 1 group H member 311p11.2CV:PGCnp
DMG:Jaffe_2016
3732CD824F9 | C33 | GR15 | IA4 | KAI1 | R2 | SAR2 | ST6 | TSPAN27CD82 molecule11p11.2CV:PGCnp
Network
3767KCNJ11BIR | HHF2 | IKATP | KIR6.2 | MODY13 | PHHI | TNDM3potassium voltage-gated channel subfamily J member 1111p15.1CV:GWASdb
CV:PGCnp
PMID:cooccur
7003TEAD1AA | NTEF-1 | REF1 | TCF-13 | TCF13 | TEAD-1 | TEF-1TEA domain transcription factor 111p15.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
7166TPH1TPRH | TRPHtryptophan hydroxylase 111p15.3-p14Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
NEUROTRANSMITTER METABOLISM
SEROTONIN
5002SLC22A18BWR1A | BWSCR1A | HET | IMPT1 | ITM | ORCTL2 | SLC22A1L | TSSC5 | p45-BWR1Asolute carrier family 22 member 1811p15.5CV:PGCnp
4046LSP1WP34 | pp52lymphocyte-specific protein 111p15.5CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6494SIPA1SPA1signal-induced proliferation-associated 111q13CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
921CD5LEU1 | T1CD5 molecule11q13CV:PGCnp
DMG:vanEijk_2014
Network
PMID:cooccur
923CD6TP120CD6 molecule11q13CV:PGCnp
DMG:vanEijk_2014
1521CTSWLYPNcathepsin W11q13.1CV:PGCnp
DMG:vanEijk_2014
5091PCPCBpyruvate carboxylase11q13.4-q13.5CV:PGCnp
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
25987TSKUE2IG4 | LRRC54 | TSKtsukushi, small leucine rich proteoglycan11q13.5CV:PGCnp
DMG:Jaffe_2016
834CASP1ICE | IL1BC | P45caspase 111q23DEG:Sanders_2013
GSMA_I
Network
915CD3DCD3-DELTA | IMD19 | T3DCD3d molecule11q23CV:PGCnp
GO_Annotation
GSMA_I
916CD3EIMD18 | T3E | TCRECD3e molecule11q23CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
GSMA_I
917CD3GCD3-GAMMA | IMD17 | T3GCD3g molecule11q23CV:PGCnp
GO_Annotation
GSMA_I
7704ZBTB16PLZF | ZNF145zinc finger and BTB domain containing 1611q23.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
GSMA_I
3606IL18IGIF | IL-18 | IL-1g | IL1F4interleukin 1811q23.1Association
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
9099USP2UBP41 | USP9ubiquitin specific peptidase 211q23.3CV:PGCnp
GSMA_I
PMID:cooccur
6484ST3GAL4CGS23 | NANTA3 | SAT3 | SIAT4 | SIAT4C | ST3GalIV | STZST3 beta-galactoside alpha-2,3-sialyltransferase 411q24.2CV:PGCnp
8538BARX2-BARX homeobox 211q25CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
79602ADIPOR2ACDCR2 | PAQR2adiponectin receptor 212p13.31CV:GWASdb
CV:PGCnp
DEG:Zhao_2015
4891SLC11A2DCT1 | DMT1 | NRAMP2solute carrier family 11 member 212q13CV:PGCnp
PMID:cooccur
7421VDRNR1I1 | PPP1R163vitamin D (1,25- dihydroxyvitamin D3) receptor12q13.11CV:PGCnp
Network
PMID:cooccur
2819GPD1GPD-C | GPDH-C | HTGTIglycerol-3-phosphate dehydrogenase 112q13.12CV:PGCnpCELL METABOLISM
3695ITGB7-integrin subunit beta 712q13.13CV:PGCnp
DMG:vanEijk_2014
Network
4035LRP1A2MR | APOER | APR | CD91 | IGFBP3R | LRP | LRP1A | TGFBR5LDL receptor related protein 112q13.3CV:PGCnp
DNM:Girard_2011
Network
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
1594CYP27B1CP2B | CYP1 | CYP1alpha | CYP27B | P450c1 | PDDR | VDD1 | VDDR | VDDRI | VDRcytochrome P450 family 27 subfamily B member 112q14.1DMG:Wockner_2014
PMID:cooccur
1610DAODAAO | DAMOX | OXDAD-amino-acid oxidase12q24Association
Core
CV:PGCnp
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
6404SELPLGCD162 | CLA | PSGL-1 | PSGL1selectin P ligand12q24CV:PGCnp
DMG:Montano_2016
Expression
GO_Annotation
23457ABCB9EST122234 | TAPLATP binding cassette subfamily B member 912q24CV:PGCnp
DMG:Jaffe_2016
144717FAM109AIPIP27A | SES1family with sequence similarity 109 member A12q24.12CV:PGCnp
DMG:Jaffe_2016
1840DTX1hDx-1deltex 112q24.13CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
GO_Annotation
CompositeSet
Darnell FMRP targets
2835GPR12GPCR12 | GPCR21 | PPP1R84G protein-coupled receptor 1213q12CV:PGCnp
DMG:Wockner_2014
54602NDFIP2N4WBP5ANedd4 family interacting protein 213q31.1CV:PGCnp
DMG:Wockner_2014
7011TEP1TLP1 | TP1 | TROVE1 | VAULT2 | p240telomerase associated protein 114q11.2CV:PGCnp
DNM:Xu_2012
GSMA_I
CompositeSet
Chromatin Remodeling Genes
23428SLC7A8LAT2 | LPI-PC1solute carrier family 7 member 814q11.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
652BMP4BMP2B | BMP2B1 | MCOPS6 | OFC11 | ZYMEbone morphogenetic protein 414q22-q23CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
8650NUMBC14orf41 | S171 | c14_5527numb homolog (Drosophila)14q24.3CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
Potential synaptic genes
4212MEIS2HsT18361 | MRG1Meis homeobox 215q14CV:PGCnp
PMID:cooccur
825CAPN3CANP3 | CANPL3 | LGMD2 | LGMD2A | nCL-1 | p94calpain 315q15.1CV:PGCnp
11151CORO1ACLABP | CLIPINA | HCORO1 | IMD8 | TACO | p57coronin 1A16p11.2CNV:YES
CV:PGCnp
GSMA_IIE
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Potential synaptic genes
3683ITGALCD11A | LFA-1 | LFA1Aintegrin subunit alpha L16p11.2CV:PGCnp
GO_Annotation
GSMA_IIE
653808ZG16JCLN | JCLN1 | ZG16Azymogen granule protein 1616p11.2CNV:YES
CV:PGCnp
GSMA_IIE
3687ITGAXCD11C | SLEB6integrin subunit alpha X16p11.2CV:PGCnp
GSMA_IIE
G2Cdb.humanPSD
G2Cdb.humanPSP
608TNFRSF17BCM | BCMA | CD269 | TNFRSF13Atumor necrosis factor receptor superfamily member 1716p13.1CV:PGCnp
3029HAGHGLO2 | GLX2 | GLXII | HAGH1hydroxyacylglutathione hydrolase16p13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
57465TBC1D24DFNA65 | DFNB86 | DOORS | EIEE16 | FIME | TLDC6TBC1 domain family member 2416p13.3CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
6376CX3CL1ABCD-3 | C3Xkine | CXC3 | CXC3C | NTN | NTT | SCYD1 | fractalkine | neurotactinC-X3-C motif chemokine ligand 116q13CV:PGCnp
PMID:cooccur
1800DPEP1MBD1 | MDP | RDPdipeptidase 1 (renal)16q24.3CV:PGCnp
GO_Annotation
3682ITGAECD103 | HUMINAEintegrin subunit alpha E17p13CV:PGCnp
DMG:Wockner_2014
30851TAX1BP3TIP-1 | TIP1Tax1 binding protein 317p13DMG:vanEijk_2014
Expression
116840CNTROBLIP8 | PP1221centrobin, centrosomal BRCA2 interacting protein17p13.1CV:PGCnp
29ABRMDBactive BCR-related17p13.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
3090HIC1ZBTB29 | ZNF901 | hic-1hypermethylated in cancer 117p13.3CV:PGCnp
6532SLC6A45-HTT | 5-HTTLPR | 5HTT | HTT | OCD1 | SERT | SERT1 | hSERTsolute carrier family 6 member 417q11.2ADT:Sun_2012
Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTRANSMITTER METABOLISM
SEROTONIN
84299MIEN1C17orf37 | C35 | ORB3 | RDX12 | XTP4migration and invasion enhancer 117q12CV:PGCnp
6352CCL5D17S136E | RANTES | SCYA5 | SIS-delta | SISd | TCP228 | eoCPC-C motif chemokine ligand 517q12DMG:vanEijk_2014
PMID:cooccur
8557TCAPCMD1N | CMH25 | LGMD2G | T-cap | TELE | telethonintitin-cap17q12CV:PGCnp
Network
9326ZNHIT3TRIP3zinc finger HIT-type containing 317q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
2538G6PCG6PC1 | G6PT | GSD1 | GSD1aglucose-6-phosphatase catalytic subunit17q21CV:PGCnp
DMG:Wockner_2014
535ATP6V0A1ATP6N1 | ATP6N1A | Stv1 | VPP1 | Vph1 | a1ATPase H+ transporting V0 subunit a117q21CV:PGCnp
DMG:vanEijk_2014
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2695GIP-gastric inhibitory polypeptide17q21.3-q22CV:PGCnp
PMID:cooccur
3675ITGA3CD49C | FRP-2 | GAP-B3 | GAPB3 | ILNEB | MSK18 | VCA-2 | VL3A | VLA3aintegrin subunit alpha 317q21.33CV:PGCnp
DNM:Gulsuner_2013
GO_Annotation
PMID:cooccur
8714ABCC3ABC31 | EST90757 | MLP2 | MOAT-D | MRP3 | cMOAT2ATP binding cassette subfamily C member 317q22CV:PGCnp
DNM:McCarthy_2014
5414SEPT4ARTS | BRADEION | CE5B3 | H5 | MART | PNUTL2 | SEP4 | hCDCREL-2 | hucep-7septin 417q22CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
762CA4CAIV | Car4 | RP17carbonic anhydrase IV17q23CV:PGCnp
PMID:cooccur
CompositeSet
1636ACEACE1 | CD143 | DCP | DCP1 | ICH | MVCD3angiotensin I converting enzyme17q23.3CV:PGCnp
Network
PMID:cooccur
5635PRPSAP1PAP39phosphoribosyl pyrophosphate synthetase-associated protein 117q24-q25CV:PGCnp
DMG:Jaffe_2016
6397SEC14L1PRELID4A | SEC14LSEC14 like lipid binding 117q25.2CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
DMG:vanEijk_2014
Expression
CompositeSet
Darnell FMRP targets
924CD7GP40 | LEU-9 | TP41 | Tp40CD7 molecule17q25.2-q25.3DMG:vanEijk_2014
PMID:cooccur
55034MOCOSHMCS | MCS | MOSmolybdenum cofactor sulfurase18q12CV:PGCnp
DMG:Jaffe_2016
4225MEP1B-meprin A subunit beta18q12.2-q12.3CV:PGCnp
1528CYB5ACYB5 | MCB5cytochrome b5 type A (microsomal)18q23CV:PGCnp
DMG:Jaffe_2016
970CD70CD27L | CD27LG | TNFSF7 | TNLG8ACD70 molecule19p13CV:PGCnp
DMG:Jaffe_2016
54ACP5HPAP | SPENCDI | TRAPacid phosphatase 5, tartrate resistant19p13.2CV:PGCnp
9817KEAP1INrf2 | KLHL19kelch like ECH associated protein 119p13.2CV:PGCnp
PMID:cooccur
Ascano FMRP targets
4066LYL1bHLHa18lymphoblastic leukemia associated hematopoiesis regulator 119p13.2CV:PGCnp
2879GPX4GPx-4 | GSHPx-4 | MCSP | PHGPx | SMDS | snGPx | snPHGPxglutathione peroxidase 419p13.3CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
23526HMHA1ARHGAP45 | HA-1 | HLA-HA1histocompatibility (minor) HA-119p13.3CV:PGCnp
DEG:Zhao_2015
2767GNA11FBH | FBH2 | FHH2 | GNA-11 | HHC2 | HYPOC2G protein subunit alpha 1119p13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
22933SIRT2SIR2 | SIR2L | SIR2L2sirtuin 219q13CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
1346COX7A1COX7A | COX7AH | COX7AMcytochrome c oxidase subunit 7A119q13.1CV:PGCnp
29785CYP2S1CYPIIS1cytochrome P450 family 2 subfamily S member 119q13.1CV:PGCnp
DMG:Wockner_2014
Expression
7040TGFB1CED | DPD1 | LAP | TGFB | TGFbetatransforming growth factor beta 119q13.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
8857FCGBPFC(GAMMA)BPFc fragment of IgG binding protein19q13.1CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
CompositeSet
933CD22SIGLEC-2 | SIGLEC2CD22 molecule19q13.1CV:PGCnp
DMG:Wockner_2014
Network
8425LTBP4ARCL1C | LTBP-4 | LTBP4L | LTBP4Slatent transforming growth factor beta binding protein 419q13.1-q13.2CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
5184PEPDPROLIDASEpeptidase D19q13.11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
7305TYROBPDAP12 | KARAP | PLOSLTYRO protein tyrosine kinase binding protein19q13.12PMID:cooccur
973CD79AIGA | MB-1CD79a molecule19q13.2DMG:vanEijk_2014
GO_Annotation
56848SPHK2SK 2 | SK-2 | SPK 2 | SPK-2sphingosine kinase 219q13.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
3991LIPEAOMS4 | FPLD6 | HSL | LHSlipase E, hormone sensitive type19q13.2PMID:cooccur
2323FLT3LGFL | FLT3Lfms related tyrosine kinase 3 ligand19q13.3CV:PGCnp
DMG:vanEijk_2014
6820SULT2B1HSST2sulfotransferase family 2B member 119q13.3CV:PGCnp
DMG:Wockner_2014
6689SPIBSPI-BSpi-B transcription factor19q13.33CV:PGCnp
DNM:Xu_2012
CompositeSet
9476NAPSAKAP | Kdap | NAP1 | NAPA | SNAPAnapsin A aspartic peptidase19q13.33CV:PGCnp
5639PRRG2PRGP2proline rich Gla (G-carboxyglutamic acid) 219q13.33CV:GWAScat
CV:PGC128
CV:PGCnp
79784MYH14DFNA4 | DFNA4A | FP17425 | MHC16 | MYH17 | NMHC II-C | NMHC-II-C | PNMHH | myosinmyosin, heavy chain 14, non-muscle19q13.33CV:PGCnp
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
963CD53MOX44 | TSPAN25CD53 molecule1p13CV:GWASdb
CV:PGCnp
GSMA_I
389RHOCARH9 | ARHC | H9 | RHOH9ras homolog family member C1p13.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
914CD2LFA-2 | SRBC | T11CD2 molecule1p13.1CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
4343MOV10fSAP113 | gb110Mov10 RISC complex RNA helicase1p13.2CV:PGCnp
DNM:Fromer_2014
GSMA_I
CompositeSet
22823MTF2M96 | PCL2 | TDRD19A | dJ976O13.2metal response element binding transcription factor 21p22.1CV:GWASdb
CV:PGCnp
2634GBP2-guanylate binding protein 21p22.2CV:PGCnp
DEG:Sanders_2013
4774NFIACTF | NF-I/A | NF1-A | NFI-A | NFI-Lnuclear factor I/A1p31.3-p31.2CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
1376CPT2CPT1 | CPTASE | IIAE4carnitine palmitoyltransferase 21p32CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
1600DAB1-Dab, reelin signal transducer, homolog 1 (Drosophila)1p32-p31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
Network
PMID:cooccur
533ATP6V0BATP6F | HATPL | VMA16ATPase H+ transporting V0 subunit b1p32.3CV:PGCnp
1907EDN2ET-2 | ET2 | PPET2endothelin 21p34CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
7805LAPTM5CLAST6lysosomal protein transmembrane 51p34CV:PGCnp
6920TCEA3TFIIS | TFIIS.Htranscription elongation factor A31p36.12CV:GWASdb
CV:PGCnp
6518SLC2A5GLUT-5 | GLUT5solute carrier family 2 member 51p36.2CV:PGCnp
DMG:Wockner_2014
5293PIK3CDAPDS | IMD14 | P110DELTA | PI3K | p110Dphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta1p36.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
51150SDF4Cab45 | SDF-4stromal cell derived factor 41p36.33CV:PGCnp
DNM:Girard_2011
Expression
CompositeSet
5590PRKCZPKC-ZETA | PKC2protein kinase C zeta1p36.33-p36.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
INTRACELLULAR SIGNAL TRANSDUCTION
1805DPTTRAMPdermatopontin1q12-q23CV:PGCnp
PMID:cooccur
11126CD160BY55 | NK1 | NK28CD160 molecule1q21.1CNV:YES
GO_Annotation
GSMA_I
GSMA_IIA
51177PLEKHO1CKIP-1 | CKIP1 | JBP | OC120pleckstrin homology domain containing O11q21.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_I
GSMA_IIA
962CD48BCM1 | BLAST | BLAST1 | MEM-102 | SLAMF2 | hCD48 | mCD48CD48 molecule1q21.3-q22CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
4259MGST3GST-IIImicrosomal glutathione S-transferase 31q23CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
4921DDR2MIG20a | NTRKR3 | TKT | TYRO10discoidin domain receptor tyrosine kinase 21q23.3CV:PGCnp
GO_Annotation
GSMA_IIA
PMID:cooccur
481ATP1B1ATP1BATPase Na+/K+ transporting subunit beta 11q24CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
5997RGS2G0S8regulator of G-protein signaling 21q31CV:PGCnp
Network
PMID:cooccur
10753CAPN9GC36 | nCL-4calpain 91q42.11-q42.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
9770RASSF2CENP-34 | RASFADINRas association domain family member 220p13CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
140809SRXN1C20orf139 | Npn3 | SRX | SRX1sulfiredoxin 120p13CV:GWAScat
CV:GWASdb
CV:PGCnp
Ascano FMRP targets
140885SIRPABIT | CD172A | MFR | MYD-1 | P84 | PTPNS1 | SHPS1 | SIRPsignal regulatory protein alpha20p13CV:PGCnp
DMG:Wockner_2014
TYROSINE KINASE SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
58476TP53INP2C20orf110 | DOR | PINH | dJ1181N3.1tumor protein p53 inducible nuclear protein 220q11.22CV:PGCnp
DMG:vanEijk_2014
1908EDN3ET-3 | ET3 | HSCR4 | PPET3 | WS4Bendothelin 320q13.2-q13.3CV:GWASdb
CV:PGCnp
GO_Annotation
757TMEM50BC21orf4 | HCVP7TP3transmembrane protein 50B21q22.11CV:PGCnp
DMG:vanEijk_2014
5152PDE9AHSPDE9A2phosphodiesterase 9A21q22.3CV:PGCnp
PMID:cooccur
80781COL18A1KNO | KNO1 | KScollagen type XVIII alpha 121q22.3CV:PGCnp
DMG:Wockner_2014
3689ITGB2CD18 | LAD | LCAMB | LFA-1 | MAC-1 | MF17 | MFI7integrin subunit beta 221q22.3CV:PGCnp
DMG:vanEijk_2014
Network
54097FAM3B2-21 | C21orf11 | C21orf76 | ORF9 | PANDER | PRED44family with sequence similarity 3 member B21q22.3CV:GWASdb
CV:PGCnp
2781GNAZ-G protein subunit alpha z22q11.22GSMA_I
Network
PMID:cooccur
G-PROTEIN RELAY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2952GSTT1-glutathione S-transferase theta 122q11.23Association
GSMA_I
PMID:cooccur
23541SEC14L2C22orf6 | SPF | TAP | TAP1SEC14 like lipid binding 222q12.2CV:PGCnp
GSMA_I
6523SLC5A1D22S675 | NAGT | SGLT1solute carrier family 5 member 122q12.3CV:PGCnp
GSMA_I
PMID:cooccur
3560IL2RBCD122 | IL15RB | P70-75interleukin 2 receptor subunit beta22q13.1CV:PGCnp
PMID:cooccur
5880RAC2EN-7 | Gx | HSPC022 | p21-Rac2ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)22q13.1CV:GWASdb
CV:PGCnp
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
4248MGAT3GNT-III | GNT3mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase22q13.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
1727CYB5R3B5R | DIA1cytochrome b5 reductase 322q13.2CV:PGCnp
DMG:Jaffe_2016
5465PPARANR1C1 | PPAR | PPARalpha | hPPARperoxisome proliferator activated receptor alpha22q13.31CV:PGCnp
PMID:cooccur
410ARSAMLDarylsulfatase A22q13.33CV:PGCnp
PMID:cooccur
5967REG1AICRF | P19 | PSP | PSPS | PSPS1 | PTP | REGregenerating family member 1 alpha2p12CV:GWASdb
CV:PGCnp
925CD8ACD8 | Leu2 | MAL | p32CD8a molecule2p12CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
GSMA_I
90411MCFD2F5F8D | F5F8D2 | LMAN1IP | SDNSFmultiple coagulation factor deficiency 22p21CV:PGCnp
DMG:Nishioka_2013
130589GALMBLOCK25 | GLAT | HEL-S-63p | IBD1galactose mutarotase (aldose 1-epimerase)2p22.1CV:PGCnp
22924MAPRE3EB3 | EBF3 | EBF3-S | RP3microtubule associated protein RP/EB family member 32p23.3-p23.1CV:PGCnp
DMG:Wockner_2014
STRUCTURAL PLASTICITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
23040MYT1LMRD39 | NZF1 | ZC2HC4Bmyelin transcription factor 1 like2p25.3CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
7535ZAP70SRK | STCD | STD | TZK | ZAP-70zeta chain of T cell receptor associated protein kinase 70kDa2q12CV:PGCnp
GO_Annotation
GSMA_I
10461MERTKMER | RP38 | Tyro12 | c-Eyk | c-merMER proto-oncogene, tyrosine kinase2q14.1CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
3938LCTLAC | LPH | LPH1lactase2q21DNM:Xu_2012
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
4065LY75CD205 | CLEC13B | DEC-205 | GP200-MR6 | LY-75lymphocyte antigen 752q24CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
940CD28Tp44CD28 molecule2q33CV:PGCnp
PMID:cooccur
2641GCGGLP1 | GLP2 | GRPPglucagon2q36-q37GSMA_IIA
PMID:cooccur
1146CHRNGACHRGcholinergic receptor nicotinic gamma subunit2q37.1DNM:Guipponi_2014
GO_Annotation
PMID:cooccur
79083MLPHSLAC2-Amelanophilin2q37.3CV:PGCnp
DMG:Nishioka_2013
6988TCTA-T-cell leukemia translocation altered3p21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
885CCK-cholecystokinin3p22.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
NEUROTROPHIN SIGNALING
51738GHRLMTLRPghrelin/obestatin prepropeptide3p25.3GO_Annotation
PMID:cooccur
6514SLC2A2GLUT2solute carrier family 2 member 23q26.2CV:PGCnp
1181CLCN2CIC-2 | CLC2 | ECA2 | ECA3 | EGI11 | EGI3 | EGMA | EJM6 | EJM8 | LKPAT | clC-2chloride voltage-gated channel 23q27.1DMG:Jaffe_2016
PMID:cooccur
6480ST6GAL1SIAT1 | ST6GalI | ST6NST6 beta-galactosamide alpha-2,6-sialyltranferase 13q27.3CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
Expression
6750SSTSMSTsomatostatin3q28CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
NEUROTROPHIN SIGNALING
2560GABRB1-gamma-aminobutyric acid type A receptor beta1 subunit4p12CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
6649SOD3EC-SODsuperoxide dismutase 3, extracellular4p15.2CV:PGCnp
8671SLC4A4HNBC1 | KNBC | NBC1 | NBC2 | NBCe1-A | SLC4A5 | hhNMC | kNBC1 | pNBCsolute carrier family 4 member 44q21CV:GWASdb
CV:PGCnp
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
127ADH4ADH-2 | HEL-S-4alcohol dehydrogenase 4 (class II), pi polypeptide4q22PMID:cooccur
4547MTTPABL | MTPmicrosomal triglyceride transfer protein4q24CV:PGCnp
PMID:cooccur
839CASP6MCH2caspase 64q25CV:PGCnp
Network
Ascano FMRP targets
4258MGST2GST2 | MGST-IImicrosomal glutathione S-transferase 24q28.3CV:PGCnp
1047CLGN-calmegin4q28.3-q31.1DMG:Jaffe_2016
836CASP3CPP32 | CPP32B | SCA-1caspase 34q34CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
5618PRLRHPRL | MFAB | hPRLrIprolactin receptor5p13.2CV:PGCnp
PMID:cooccur
4883NPR3ANP-C | ANPR-C | ANPRC | C5orf23 | GUCY2B | NPR-C | NPRCnatriuretic peptide receptor 35p13.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
10409BASP1CAP-23 | CAP23 | NAP-22 | NAP22brain abundant membrane attached signal protein 15p15.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
134147CMBLJS-1carboxymethylenebutenolidase homolog (Pseudomonas)5p15.2CV:PGCnp
DMG:Wockner_2014
4214MAP3K1MAPKKK1 | MEKK | MEKK 1 | MEKK1 | SRXY6mitogen-activated protein kinase kinase kinase 15q11.2CV:PGCnp
DMG:Montano_2016
Network
7903ST8SIA4PST | PST1 | SIAT8D | ST8SIA-IVST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 45q21CV:PGCnp
GO_Annotation
PMID:cooccur
56136PCDHA13CNR5 | CNRN5 | CNRS5 | CRNR5 | PCDH-ALPHA13protocadherin alpha 135q31CV:PGCnp
GSMA_I
7045TGFBIBIGH3 | CDB1 | CDG2 | CDGG1 | CSD | CSD1 | CSD2 | CSD3 | EBMD | LCD1transforming growth factor beta induced5q31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
9547CXCL14BMAC | BRAK | KEC | KS1 | MIP-2g | MIP2G | NJAC | SCYB14C-X-C motif chemokine ligand 145q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
3659IRF1IRF-1 | MARinterferon regulatory factor 15q31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
6583SLC22A4OCTN1solute carrier family 22 member 45q31.1CV:PGCnp
GSMA_I
PMID:cooccur
309ANXA6ANX6 | CBP68annexin A65q33.1CV:PGCnp
DMG:vanEijk_2014
GSMA_I
GSMA_IIA
GSMA_IIE
CompositeSet
Ascano FMRP targets
11346SYNPO-synaptopodin5q33.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
CompositeSet
Darnell FMRP targets
Potential synaptic genes
55568GALNT10GALNACT10 | PPGALNACT10 | PPGANTASE10polypeptide N-acetylgalactosaminyltransferase 105q33.2CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
26999CYFIP2PIR121cytoplasmic FMR1 interacting protein 25q33.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
8728ADAM19FKSG34 | MADDAM | MLTNBADAM metallopeptidase domain 195q33.3CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
6793STK10LOK | PRO2729serine/threonine kinase 105q35.1CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
DNM:Fromer_2014
GSMA_IIA
CompositeSet
860RUNX2AML3 | CBF-alpha-1 | CBFA1 | CCD | CCD1 | CLCD | OSF-2 | OSF2 | PEA2aA | PEBP2aArunt related transcription factor 26p21CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
3106HLA-BAS | Bw-47 | Bw-50 | HLAB | SPDA1major histocompatibility complex, class I, B6p21.3CV:GWASdb
CV:PGCnp
GSMA_I
Network
PMID:cooccur
3109HLA-DMBD6S221E | RING7major histocompatibility complex, class II, DM beta6p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
3112HLA-DOBDOBmajor histocompatibility complex, class II, DO beta6p21.3CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
720C4AC4 | C4A2 | C4A3 | C4A4 | C4A6 | C4AD | C4S | CO4 | CPAMD2 | RGcomplement component 4A (Rodgers blood group)6p21.3Association
CV:PGCnp
GSMA_I
PMID:cooccur
63940GPSM3AGS4 | C6orf9 | G18 | G18.1a | G18.1b | G18.2 | NG1G-protein signaling modulator 36p21.3CV:GWASdb
CV:PGCnp
GSMA_I
55856ACOT13HT012 | PNAS-27 | THEM2acyl-CoA thioesterase 136p22.3CV:PGCnp
GSMA_I
670BPHLBPH-RP | MCNAA | VACVASEbiphenyl hydrolase-like (serine hydrolase)6p25CV:PGCnp
GSMA_I
3662IRF4LSIRF | MUM1 | NF-EM5 | SHEP8interferon regulatory factor 46p25.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
58528RRAGDRAGD | bA11D8.2.1Ras related GTP binding D6q15CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
2173FABP7B-FABP | BLBP | FABPB | MRGfatty acid binding protein 76q22-q23Association
CV:PGCnp
GO_Annotation
PMID:cooccur
6943TCF21POD1 | bHLHa23transcription factor 216q23.2CV:PGCnp
DMG:Jaffe_2016
1644DDCAADCdopa decarboxylase7p12.2CV:PGCnp
PMID:cooccur
DOPAMINE
SEROTONIN
4967OGDHAKGDH | E1k | OGDCoxoglutarate dehydrogenase7p14-p13CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
445347TARPCD3G | TCRG | TCRGC1 | TCRGC2 | TCRGVTCR gamma alternate reading frame protein7p15-p14CV:PGCnp
PMID:cooccur
7462LAT2HSPC046 | LAB | NTAL | WBSCR15 | WBSCR5 | WSCR5linker for activation of T-cells family member 27q11.23CNV:YES
CV:PGCnp
GO_Annotation
7036TFR2HFE3 | TFRC2transferrin receptor 27q22CV:PGCnp
DMG:Wockner_2014
4189DNAJB9ERdj4 | MDG-1 | MDG1 | MST049 | MSTP049DnaJ heat shock protein family (Hsp40) member B97q31|14q24.2-q24.3CV:PGCnp
373156GSTK1GST | GST 13-13 | GST13 | GST13-13 | GSTK1-1 | hGSTK1glutathione S-transferase kappa 17q34CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
51667NUB1BS4 | NUB1L | NYREN18negative regulator of ubiquitin-like proteins 17q36CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
155066ATP6V0E2ATP6V0E2L | C7orf32ATPase H+ transporting V0 subunit e27q36.1CV:PGCnp
DMG:Jaffe_2016
3620IDO1IDO | IDO-1 | INDOindoleamine 2,3-dioxygenase 18p11.21PMID:cooccur
23259DDHD2SAMWD1 | SPG54 | iPLA(1)gammaDDHD domain containing 28p11.23CV:PGCnp
DNM:Xu_2012
CompositeSet
2053EPHX2CEH | SEHepoxide hydrolase 28p21CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
2907GRINAHNRGW | LFG1 | NMDARA1 | TMBIM3glutamate ionotropic receptor NMDA type subunit associated protein 18q24.3PMID:cooccur
3717JAK2JTK10 | THCYT3Janus kinase 29p24CV:PGCnp
GO_Annotation
Network
PMID:cooccur
5125PCSK5PC5 | PC6 | PC6A | SPC6proprotein convertase subtilisin/kexin type 59q21.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
954ENTPD2CD39L1 | NTPDase-2ectonucleoside triphosphate diphosphohydrolase 29q34PMID:cooccur
1384CRATCAT1carnitine O-acetyltransferase9q34.1CV:PGCnp
7410VAV2VAV-2vav guanine nucleotide exchange factor 29q34.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
56654NPDC1CAB | CAB- | CAB-1 | CAB1 | NPDC-1neural proliferation, differentiation and control, 19q34.3DMG:Montano_2016
PMID:cooccur
2664GDI11A | GDIL | MRX41 | MRX48 | OPHN2 | RABGD1A | RABGDIA | XAP-4GDP dissociation inhibitor 1Xq28CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
215ABCD1ABC42 | ALD | ALDP | AMNATP binding cassette subfamily D member 1Xq28CV:GWAScat
CV:GWASdb
CV:PGCnp