Search results: The pahtway p3854 has 1305 genes in the original annotation. Currently, there are 897 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
10953TOMM34HTOM34P | TOM34 | URCC3translocase of outer mitochondrial membrane 34-CV:PGCnp
8923197ND4-NADH dehydrogenase subunit 4-PMID:cooccur
4538ND4MTND4NADH dehydrogenase, subunit 4 (complex I)-PMID:cooccur
6775072ND4-NADH dehydrogenase subunit 4-PMID:cooccur
8029CUBNIFCR | MGA1 | gp280cubilin10p12.31CV:PGCnp
DMG:Wockner_2014
7431VIMCTRCT30 | HEL113vimentin10p13CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
1316KLF6BCD1 | CBA1 | COPEB | CPBP | GBF | PAC1 | ST12 | ZF9Kruppel-like factor 610p15Association
CV:PGCnp
DMG:Jaffe_2016
5209PFKFB3IPFK2 | PFK2 | iPFK-26-phosphofructo-2-kinase/fructose-2,6-biphosphatase 310p15.1CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
22884WDR37-WD repeat domain 3710p15.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
Ascano FMRP targets
4153MBL2COLEC1 | HSMBPC | MBL | MBL2D | MBP | MBP-C | MBP1 | MBPDmannose binding lectin 210q11.2CV:PGCnp
GO_Annotation
PMID:cooccur
240ALOX55-LO | 5-LOX | 5LPG | LOG5arachidonate 5-lipoxygenase10q11.2CV:PGCnp
DMG:Jaffe_2016
5979RETCDHF12 | CDHR16 | HSCR1 | MEN2A | MEN2B | MTC1 | PTC | RET-ELE1 | RET51ret proto-oncogene10q11.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
288ANK3ANKYRIN-G | MRT37ankyrin 3, node of Ranvier (ankyrin G)10q21CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
3363HTR75-HT75-hydroxytryptamine receptor 710q21-q24ADT:Sun_2012
Association
CV:PGCnp
DNM:Xu_2012
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
CompositeSet
2894GRID1GluD1glutamate ionotropic receptor delta type subunit 110q22Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
818CAMK2GCAMK | CAMK-II | CAMKGcalcium/calmodulin-dependent protein kinase II gamma10q22DMG:Jaffe_2016
DMG:Wockner_2014
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
653509SFTPA1COLEC4 | PSAP | PSP-A | PSPA | SFTP1 | SFTPA1B | SP-A | SP-A1 | SPA | SPA1surfactant protein A110q22.3CV:PGCnp
3416IDEINSULYSINinsulin degrading enzyme10q23-q25CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
PMID:cooccur
387695C10orf99AP-57 | CSBF | UNQ1833chromosome 10 open reading frame 9910q23.1CV:PGCnp
Expression
6623SNCGBCSG1 | SRsynuclein gamma10q23.2-q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5728PTEN10q23del | BZS | CWS1 | DEC | GLM2 | MHAM | MMAC1 | PTEN1 | TEP1phosphatase and tensin homolog10q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
2746GLUD1GDH | GDH1 | GLUDglutamate dehydrogenase 110q23.3CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5950RBP4MCOPCB10 | RDCCASretinol binding protein 410q23.33CV:PGCnp
PMID:cooccur
4601MXI1MAD2 | MXD2 | MXI | bHLHc11MAX interactor 1, dimerization protein10q24-q25CV:GWASdb
CV:PGCnp
1586CYP17A1CPT7 | CYP17 | P450C17 | S17AHcytochrome P450 family 17 subfamily A member 110q24.3CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
LK:YES
9748SLKLOSK | STK2 | bA16H23.1 | se20-9STE20 like kinase10q24.33CV:PGCnp
DMG:Jaffe_2016
9118INANEF5 | NF-66 | TXBP-1internexin neuronal intermediate filament protein alpha10q24.33CV:PGCnp
GO_Annotation
LK:YES
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
150ADRA2AADRA2 | ADRA2R | ADRAR | ALPHA2AAR | ZNF32adrenoceptor alpha 2A10q25.2ADT:Sun_2012
CV:PGCnp
Network
PMID:cooccur
GPCR SIGNALLING
153ADRB1ADRB1R | B1AR | BETA1AR | RHRadrenoceptor beta 110q25.3ADT:Sun_2012
CV:PGCnp
DMG:Jaffe_2016
Network
PMID:cooccur
5791PTPREHPTPE | PTPE | R-PTP-EPSILONprotein tyrosine phosphatase, receptor type E10q26CV:PGCnp
GSMA_IIA
PMID:cooccur
10570DPYSL4CRMP3 | DRP-4 | ULIP4dihydropyrimidinase like 410q26CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
50624CUZD1ERG-1 | ERG1 | ITMAP1 | UO-44CUB and zona pellucida like domains 110q26.13CV:GWASdb
DNM:Fromer_2014
GSMA_IIA
CompositeSet
1892ECHS1ECHS1D | SCEHenoyl-CoA hydratase, short chain, 1, mitochondrial10q26.2-q26.3CV:PGCnp
GSMA_IIA
Network
1571CYP2E1CPE1 | CYP2E | P450-J | P450C2Ecytochrome P450 family 2 subfamily E member 110q26.3CV:PGCnp
PMID:cooccur
84680ACCSACS | PHACS1-aminocyclopropane-1-carboxylate synthase homolog (inactive)11p11CV:PGCnp
PMID:cooccur
8525DGKZDAGK5 | DAGK6 | DGK-ZETA | hDGKzetadiacylglycerol kinase zeta11p11.2CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
8567MADDDENN | IG20 | RAB3GEPMAP kinase activating death domain11p11.2CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
1132CHRM4HM4 | M4Rcholinergic receptor muscarinic 411p12-p11.2ADT:Sun_2012
CV:PGCnp
GO_Annotation
PMID:cooccur
960CD44CDW44 | CSPG8 | ECMR-III | HCELL | HUTCH-I | IN | LHR | MC56 | MDU2 | MDU3 | MIC4 | Pgp1CD44 molecule (Indian blood group)11p13CV:GWASdb
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Network
6506SLC1A2EAAT2 | GLT-1 | HBGTsolute carrier family 1 member 211p13Association
CV:GWASdb
CV:PGCnp
Expression
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTRANSMITTER METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5896RAG1RAG-1 | RNF74recombination activating gene 111p13CV:PGCnp
2488FSHBHH24follicle stimulating hormone beta subunit11p13CV:PGCnp
627BDNFANON2 | BULN2brain-derived neurotrophic factor11p13Association
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTROPHIN SIGNALING
Potential synaptic genes
3739KCNA4HBK4 | HK1 | HPCN2 | HUKII | KCNA4L | KCNA8 | KV1.4 | PCN2potassium voltage-gated channel subfamily A member 411p14CV:PGCnpEXCITABILITY
8590OR6A2I7 | OR11-55 | OR6A1 | OR6A2Polfactory receptor family 6 subfamily A member 211p15CV:PGCnp
81285OR51E2OR51E3P | OR52A2 | PSGRolfactory receptor family 51 subfamily E member 211p15CV:PGCnp
DMG:Wockner_2014
3767KCNJ11BIR | HHF2 | IKATP | KIR6.2 | MODY13 | PHHI | TNDM3potassium voltage-gated channel subfamily J member 1111p15.1CV:GWASdb
CV:PGCnp
PMID:cooccur
6833ABCC8ABC36 | HHF1 | HI | HRINS | MRP8 | PHHI | SUR | SUR1 | SUR1delta2 | TNDM2ATP binding cassette subfamily C member 811p15.1CV:GWASdb
CV:PGCnp
5682PSMA1HC2 | HEL-S-275 | NU | PROS30proteasome subunit alpha 111p15.1CV:PGCnp
DMG:Jaffe_2016
Network
796CALCACALC1 | CGRP | CGRP-I | CGRP1 | CT | KC | PCTcalcitonin related polypeptide alpha11p15.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
5741PTHPTH1parathyroid hormone11p15.3CV:PGCnp
Network
PMID:cooccur
143425SYT9-synaptotagmin 911p15.4CV:PGCnp
DNM:McCarthy_2014
GO_Annotation
EXOCYTOSIS
7465WEE1WEE1A | WEE1huWEE1 G2 checkpoint kinase11p15.4CV:PGCnp
Expression
PMID:cooccur
3481IGF2C11orf43 | GRDF | IGF-II | PP9974insulin like growth factor 211p15.5CV:PGCnp
PMID:cooccur
1028CDKN1CBWCR | BWS | KIP2 | WBS | p57 | p57Kip2cyclin-dependent kinase inhibitor 1C11p15.5CV:PGCnp
DMG:Nishioka_2013
DMG:vanEijk_2014
DMG:Wockner_2014
PMID:cooccur
283120H19ASM | ASM1 | BWS | D11S813E | LINC00008 | NCRNA00008 | WT2H19, imprinted maternally expressed transcript (non-protein coding)11p15.5CV:PGCnp
PMID:cooccur
10522DEAF1MRD24 | NUDR | SPN | ZMYND5DEAF1, transcription factor11p15.5CV:PGCnp
DMG:Wockner_2014
5553PRG2BMPG | MBP | MBP1proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)11q12CV:PGCnp
DMG:Wockner_2014
5024P2RX3P2X3purinergic receptor P2X 311q12CV:PGCnpGPCR SIGNALLING
10004NAALADL1I100 | NAALADASELN-acetylated alpha-linked acidic dipeptidase-like 111q12CV:PGCnp
DMG:Wockner_2014
5837PYGM-phosphorylase, glycogen, muscle11q12-q13.2DMG:Wockner_2014
PMID:cooccur
9066SYT7IPCA-7 | IPCA7 | PCANAP7 | SYT-VII | SYTVIIsynaptotagmin 711q12.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
6712SPTBN2GTRAP41 | SCA5 | SCAR14spectrin beta, non-erythrocytic 211q13CV:PGCnpSTRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
5499PPP1CAPP-1A | PP1A | PP1alpha | PPP1Aprotein phosphatase 1 catalytic subunit alpha11q13DMG:Montano_2016
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Chromatin Remodeling Genes
7351UCP2BMIQ4 | SLC25A8 | UCPHuncoupling protein 2 (mitochondrial, proton carrier)11q13Association
CV:PGCnp
GO_Annotation
PMID:cooccur
2694GIFIF | IFMH | INF | TCN3gastric intrinsic factor11q13CV:PGCnp
DNM:Xu_2012
CompositeSet
1128CHRM1HM1 | M1 | M1Rcholinergic receptor muscarinic 111q13ADT:Sun_2012
CV:PGCnp
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
595CCND1BCL1 | D11S287E | PRAD1 | U21B31cyclin D111q13DMG:Jaffe_2016
Network
PMID:cooccur
2197FAUFAU1 | Fub1 | Fubi | MNSFbeta | RPS30 | S30 | asr1Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed11q13DMG:Jaffe_2016
1351COX8ACOX | COX8 | COX8-2 | COX8L | VIII | VIII-Lcytochrome c oxidase subunit 8A11q13.1CV:PGCnp
DMG:Nishioka_2013
2011MARK2EMK-1 | EMK1 | PAR-1 | Par-1b | Par1bmicrotubule affinity regulating kinase 211q13.1CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
51083GALETL8 | GAL-GMAP | GALN | GLNN | GMAPgalanin/GMAP prepropeptide11q13.3CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
5138PDE2ACGS-PDE | PDE2A1 | PED2A4 | cGSPDEphosphodiesterase 2A11q13.4CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
7352UCP3SLC25A9uncoupling protein 3 (mitochondrial, proton carrier)11q13.4CV:PGCnp
GO_Annotation
4135MAP6MAP6-N | MTAP6 | N-STOP | STOPmicrotubule associated protein 611q13.5Association
CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
4975OMP-olfactory marker protein11q13.5GO_Annotation
PMID:cooccur
1740DLG2PPP1R58 | PSD-93 | PSD93 | chapsyn-110discs large homolog 211q14.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
2915GRM5GPRC1E | MGLUR5 | PPP1R86 | mGlu5glutamate receptor, metabotropic 511q14.3Association
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
GPCR SIGNALLING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
26973CHORDC1CHP1cysteine and histidine rich domain containing 111q14.3CV:PGCnp
DMG:Wockner_2014
2526FUT4CD15 | ELFT | FCT3A | FUC-TIV | FUTIV | LeX | SSEA-1fucosyltransferase 411q21CV:GWASdb
CV:PGCnp
5241PGRNR3C3 | PRprogesterone receptor11q22-q23CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
2900GRIK4EAA1 | GRIK | GluK4 | KA1glutamate ionotropic receptor kainate type subunit 411q22.3Association
Core
CV:PGCnp
GO_Annotation
GR_WM
GSMA_I
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
Potential synaptic genes
4314MMP3CHDS6 | MMP-3 | SL-1 | STMY | STMY1 | STR1matrix metallopeptidase 311q22.3PMID:cooccur
1813DRD2D2DR | D2Rdopamine receptor D211q23ADT:Sun_2012
Association
Core
CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
GPCR SIGNALLING
Potential synaptic genes
915CD3DCD3-DELTA | IMD19 | T3DCD3d molecule11q23CV:PGCnp
GO_Annotation
GSMA_I
917CD3GCD3-GAMMA | IMD17 | T3GCD3g molecule11q23CV:PGCnp
GO_Annotation
GSMA_I
335APOA1apo(a)apolipoprotein A-I11q23-q24GSMA_I
Network
PMID:cooccur
1737DLATDLTA | PDC-E2 | PDCE2dihydrolipoamide S-acetyltransferase11q23.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3606IL18IGIF | IL-18 | IL-1g | IL1F4interleukin 1811q23.1Association
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
10525HYOU1GRP-170 | Grp170 | HSP12A | ORP-150 | ORP150hypoxia up-regulated 111q23.1-q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
23705CADM1BL2 | IGSF4 | IGSF4A | NECL2 | Necl-2 | RA175 | ST17 | SYNCAM | TSLC1 | sTSLC-1 | sgIGSF | synCAM1cell adhesion molecule 111q23.2CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
GSMA_I
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
2542SLC37A4G6PT1 | G6PT2 | G6PT3 | GSD1b | GSD1c | GSD1d | PRO0685 | TRG-19 | TRG19solute carrier family 37 member 411q23.3CV:PGCnp
GSMA_I
3145HMBSPBG-D | PBGD | PORC | UPShydroxymethylbilane synthase11q23.3Association
CV:PGCnp
GSMA_I
6230RPS25S25ribosomal protein S2511q23.3CV:PGCnp
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
2113ETS1ETS-1 | EWSR2 | c-ets-1 | p54ETS proto-oncogene 1, transcription factor11q23.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
56912IFT46C11orf2 | C11orf60 | CFAP32intraflagellar transport 4611q23.3CV:PGCnp
GSMA_I
11181TREHTRE | TREAtrehalase11q23.3CV:PGCnp
CV:PheWAS
GSMA_I
4900NRGNRC3 | hngneurogranin11q24Association
CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
9638FEZ1UNC-76fasciculation and elongation protein zeta 111q24.2Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
27087B3GAT1CD57 | GLCATP | GLCUATP | HNK1 | LEU7 | NK-1 | NK1beta-1,3-glucuronyltransferase 111q25CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
121512FGD4CMT4H | FRABP | ZFYVE6FYVE, RhoGEF and PH domain containing 412p11.21CV:GWASdb
CV:PGCnp
GO_Annotation
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
10059DNM1LDLP1 | DRP1 | DVLP | DYMPLE | EMPF | HDYNIVdynamin 1-like12p11.21CV:GWASdbENDOCYTOSIS
3764KCNJ8KIR6.1 | uKATP-1potassium voltage-gated channel subfamily J member 812p11.23CV:PGCnp
DMG:vanEijk_2014
Expression
EXCITABILITY
5139PDE3ACGI-PDE | CGI-PDE A | CGI-PDE-A | HTNBphosphodiesterase 3A12p12CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
2984GUCY2CDIAR6 | GUC2C | MECIL | MUCIL | STARguanylate cyclase 2C12p12CV:PGCnp
5288PIK3C2GPI3K-C2-gamma | PI3K-C2GAMMAphosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma12p12Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
6489ST8SIA1GD3S | SIAT8 | SIAT8-A | SIAT8A | ST8SiaIST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 112p12.1-p11.2CV:PGCnp
Expression
6539SLC6A12BGT-1 | BGT1 | GAT2solute carrier family 6 member 1212p13CV:PGCnp
GO_Annotation
PMID:cooccur
2784GNB3-G protein subunit beta 312p13Association
PMID:cooccur
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
339APOBEC1APOBEC-1 | BEDP | CDAR1 | HEPRapolipoprotein B mRNA editing enzyme catalytic subunit 112p13.1CV:PGCnp
775CACNA1CCACH2 | CACN2 | CACNL1A1 | CCHL1A1 | CaV1.2 | LQT8 | TScalcium voltage-gated channel subunit alpha1 C12p13.3CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
EXCITABILITY
SEROTONIN
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6540SLC6A13GAT-2 | GAT2 | GAT3solute carrier family 6 member 1312p13.3CV:PGCnp
GO_Annotation
PMID:cooccur
2A2MA2MD | CPAMD5 | FWP007 | S863-7alpha-2-macroglobulin12p13.31CV:PGCnp
DMG:Wockner_2014
Network
3736KCNA1AEMK | EA1 | HBK1 | HUK1 | KV1.1 | MBK1 | MK1 | RBK1potassium voltage-gated channel subfamily A member 112p13.32CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
EXCITABILITY
1272CNTN1F3 | GP135 | MYPCNcontactin 112q12CV:PGCnp
Network
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
363AQP6AQP2L | KIDaquaporin 612q13CV:PGCnp
DMG:Montano_2016
377ARF3-ADP ribosylation factor 312q13DEG:Maycox_2009
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
23416KCNH3BEC1 | ELK2 | Kv12.2potassium voltage-gated channel subfamily H member 312q13CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
784CACNB3CAB3 | CACNLB3calcium voltage-gated channel auxiliary subunit beta 312q13CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2065ERBB3ErbB-3 | HER3 | LCCS2 | MDA-BF-1 | c-erbB-3 | c-erbB3 | erbB3-S | p180-ErbB3 | p45-sErbB3 | p85-sErbB3erb-b2 receptor tyrosine kinase 312q13Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
4284MIPAQP0 | CTRCT15 | LIM1 | MIP26 | MP26major intrinsic protein of lens fiber12q13CV:PGCnp
Network
PMID:cooccur
51380CSADCSD | PCAPcysteine sulfinic acid decarboxylase12q13.11-q14.3CV:PGCnp
DMG:Wockner_2014
359AQP2AQP-CD | WCH-CDaquaporin 212q13.12CV:PGCnp
DMG:Wockner_2014
23109DDN-dendrin12q13.12CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
23468CBX5HEL25 | HP1 | HP1Achromobox 512q13.13CV:PGCnp
DNM:Gulsuner_2013
3221HOXC4HOX3 | HOX3E | cp19homeobox C412q13.3CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
8914TIMELESSTIM | TIM1 | hTIMtimeless circadian clock12q13.3Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
3458IFNGIFG | IFIinterferon, gamma12q14CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
1594CYP27B1CP2B | CYP1 | CYP1alpha | CYP27B | P450c1 | PDDR | VDD1 | VDDR | VDDRI | VDRcytochrome P450 family 27 subfamily B member 112q14.1DMG:Wockner_2014
PMID:cooccur
4193MDM2ACTFS | HDMX | hdm2MDM2 proto-oncogene12q14.3-q15CV:PGCnp
Network
PMID:cooccur
8091HMGA2BABL | HMGI-C | HMGIC | LIPO | STQTL9high mobility group AT-hook 212q15CV:PGCnp
PMID:cooccur
29953TRHDEPAP-II | PGPEP2 | TRH-DEthyrotropin releasing hormone degrading enzyme12q21.1CV:PGCnp
374462PTPRQDFNB84 | DFNB84A | PTPGMC1 | R-PTP-Qprotein tyrosine phosphatase, receptor type Q12q21.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
4673NAP1L1NAP1 | NAP1L | NRPnucleosome assembly protein 1 like 112q21.2CV:PGCnp
DEG:Maycox_2009
490ATP2B1PMCA1 | PMCA1kbATPase plasma membrane Ca2+ transporting 112q21.3CV:PGCnp
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
9182RASSF9P-CIP1 | PAMCI | PCIP1Ras association domain family member 912q21.31CV:PGCnp
3034HALHIS | HSTDhistidine ammonia-lyase12q23.1DMG:vanEijk_2014
PMID:cooccur
3479IGF1IGF-I | IGFI | MGFinsulin like growth factor 112q23.2CV:PGCnp
GO_Annotation
PMID:cooccur
10019SH2B3IDDM20 | LNKSH2B adaptor protein 312q24CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
Network
5781PTPN11BPTP3 | CFC | JMML | METCDS | NS1 | PTP-1D | PTP2C | SH-PTP2 | SH-PTP3 | SHP2protein tyrosine phosphatase, non-receptor type 1112q24CV:PGCnp
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
10993SDSSDHserine dehydratase12q24.13CV:PGCnp
PMID:cooccur
10645CAMKK2CAMKK | CAMKKBcalcium/calmodulin-dependent protein kinase kinase 212q24.2CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
8739HRKDP5 | HARAKIRIharakiri, BCL2 interacting protein12q24.22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
4842NOS1IHPS1 | N-NOS | NC-NOS | NOS | bNOS | nNOSnitric oxide synthase 112q24.22Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
3242HPD4-HPPD | 4HPPD | GLOD3 | HPPDASE | PPD4-hydroxyphenylpyruvate dioxygenase12q24.31CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5319PLA2G1BPLA2 | PLA2A | PPLA2phospholipase A2 group IB12q24.31CV:PGCnp
GO_Annotation
PMID:cooccur
65082VPS33A-VPS33A, CORVET/HOPS core subunit12q24.31CV:PGCnpINTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
121260SLC15A4FP12591 | PHT1 | PTR4solute carrier family 15 member 412q24.32CV:PGCnp
DMG:Wockner_2014
Expression
241ALOX5APFLAParachidonate 5-lipoxygenase activating protein13q12CV:GWASdb
CV:PGCnp
9365KL-klotho13q12CV:GWASdb
CV:PGCnp
PMID:cooccur
3651PDX1GSF | IDX-1 | IPF1 | IUF1 | MODY4 | PAGEN1 | PDX-1 | STF-1pancreatic and duodenal homeobox 113q12.1CV:PGCnp
PMID:cooccur
675BRCA2BRCC2 | BROVCA2 | FACD | FAD | FAD1 | FANCD | FANCD1 | GLM3 | PNCA2 | XRCC11breast cancer 213q12.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
3356HTR2A5-HT2A | HTR25-hydroxytryptamine receptor 2A13q14-q21ADT:Sun_2012
Association
Core
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
GPCR SIGNALLING
CompositeSet
115761ARL11ARLTS1ADP ribosylation factor like GTPase 1113q14.2CV:PGCnp
540ATP7BPWD | WC1 | WD | WNDATPase copper transporting beta13q14.3CV:PGCnp
PMID:cooccur
7174TPP2TPP-2 | TPPIItripeptidyl peptidase II13q32-q33CV:PGCnp
GO_Annotation
Ascano FMRP targets
6564SLC15A1HPECT1 | HPEPT1 | PEPT1solute carrier family 15 member 113q32.3CV:PGCnp
PMID:cooccur
259232NALCNCLIFAHDD | CanIon | IHPRF | IHPRF1 | INNFD | VGCNL1 | bA430M15.1sodium leak channel, non-selective13q32.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
CompositeSet
2259FGF14FGF-14 | FHF-4 | FHF4 | SCA27fibroblast growth factor 1413q34Association
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
8660IRS2IRS-2insulin receptor substrate 213q34CV:PGCnp
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
23263MCF2LARHGEF14 | DBS | OSTMCF.2 cell line derived transforming sequence like13q34CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
2159F10FX | FXAcoagulation factor X13q34CV:PGCnp
GO_Annotation
Network
PMID:cooccur
5720PSME1HEL-S-129m | IFI5111 | PA28A | PA28alpha | REGalphaproteasome activator subunit 114q11.2GSMA_I
PMID:cooccur
3183HNRNPCC1 | C2 | HNRNP | HNRPC | SNRPCheterogeneous nuclear ribonucleoprotein C (C1/C2)14q11.2CV:GWASdb
CV:PGCnp
GSMA_I
Potential synaptic genes
90809TMEM55BC14orf9transmembrane protein 55B14q11.2DNM:Guipponi_2014
GSMA_I
5693PSMB5LMPX | MB1 | Xproteasome subunit beta 514q11.2CV:PGCnp
GSMA_I
4625MYH7CMD1S | CMH1 | MPD1 | MYHCB | SPMD | SPMMmyosin, heavy chain 7, cardiac muscle, beta14q12CV:PGCnp
GSMA_I
2290FOXG1BF1 | BF2 | FHKL3 | FKH2 | FKHL1 | FKHL2 | FKHL3 | FKHL4 | FOXG1A | FOXG1B | FOXG1C | HBF-1 | HBF-2 | HBF-3 | HBF-G2 | HBF2 | HFK1 | HFK2 | HFK3 | KHL2 | QINforkhead box G114q13DMG:Jaffe_2016
GO_Annotation
GSMA_I
PMID:cooccur
6751SSTR1SRIF-2 | SS-1-R | SS1-R | SS1Rsomatostatin receptor 114q13CV:PGCnp
GO_Annotation
PMID:cooccur
7080NKX2-1BCH | BHC | NK-2 | NKX2.1 | NKX2A | NMTC1 | T/EBP | TEBP | TITF1 | TTF-1 | TTF1NK2 homeobox 114q13GO_Annotation
PMID:cooccur
5687PSMA6IOTA | PROS27 | p27Kproteasome subunit alpha 614q13CV:GWASdb
CV:PGCnp
Network
253959RALGAPA1GARNL1 | GRIPE | RalGAPalpha1 | TULIP1 | p240Ral GTPase activating protein catalytic alpha subunit 114q13.2CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
4247MGAT2CDG2A | CDGS2 | GLCNACTII | GNT-II | GNT2mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase14q21CV:PGCnp
5836PYGLGSD6phosphorylase, glycogen, liver14q21-q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
2643GCH1DYT14 | DYT5 | DYT5a | GCH | GTP-CH-1 | GTPCH1 | HPABH4BGTP cyclohydrolase 114q22.1-q22.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
6252RTN1NSPreticulon 114q23.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
27133KCNH5EAG2 | H-EAG2 | Kv10.2 | hEAG2potassium voltage-gated channel subfamily H member 514q23.2CV:PGCnp
PMID:cooccur
2100ESR2ER-BETA | ESR-BETA | ESRB | ESTRB | Erb | NR3A2estrogen receptor 2 (ER beta)14q23.2DNM:Fromer_2014
Expression
Network
PMID:cooccur
CompositeSet
2342FNTBFPTBfarnesyltransferase, CAAX box, beta14q23.3CV:PGCnp
6547SLC8A3NCX3solute carrier family 8 member A314q24.1CV:PGCnp
DMG:Nishioka_2013
ION BALANCE
4293MAP3K9MEKK9 | MLK1 | PRKE1mitogen-activated protein kinase kinase kinase 914q24.2CV:GWAScat
CV:GWASdb
CV:PGCnp
2353FOSAP-1 | C-FOS | p55FBJ murine osteosarcoma viral oncogene homolog14q24.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
1743DLSTDLTSdihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)14q24.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5663PSEN1AD3 | FAD | PS-1 | PS1 | S182presenilin 114q24.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
NEUROTROPHIN SIGNALING
7253TSHRCHNG1 | LGR3 | hTSHR-Ithyroid stimulating hormone receptor14q31CV:PGCnp
DMG:Wockner_2014
Network
5104SERPINA5PAI-3 | PAI3 | PCI | PCI-B | PLANH3 | PROCIserpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 514q32.1CV:PGCnp
DNM:McCarthy_2014
Expression
5265SERPINA1A1A | A1AT | AAT | PI | PI1 | PRO2275 | alpha1ATserpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 114q32.1CV:PGCnp
PMID:cooccur
57596BEGAIN-brain enriched guanylate kinase associated14q32.2CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
51466EVLRNB6Enah/Vasp-like14q32.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
321APBA2D15S1518E | HsT16821 | LIN-10 | MGC:14091 | MINT2 | X11-BETA | X11Lamyloid beta precursor protein binding family A member 215q11-q12CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
Potential synaptic genes
7337UBE3AANCR | AS | E6-AP | EPVE6AP | HPVE6Aubiquitin protein ligase E3A15q11.2CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
2562GABRB3ECA5gamma-aminobutyric acid type A receptor beta3 subunit15q12CNV:YES
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
Potential synaptic genes
2567GABRG3-gamma-aminobutyric acid type A receptor gamma3 subunit15q12CNV:YES
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
Potential synaptic genes
6447SCG57B2 | P7B2 | SGNE1 | SgVsecretogranin V15q13-q14CNV:YES
CV:PGCnp
GO_Annotation
NEUROTROPHIN SIGNALING
701BUB1BBUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1BUB1 mitotic checkpoint serine/threonine kinase B15q15CV:PGCnp
DMG:Jaffe_2016
1159CKMT1BCKMT | CKMT1 | UMTCKcreatine kinase, mitochondrial 1B15q15CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
825CAPN3CANP3 | CANPL3 | LGMD2 | LGMD2A | nCL-1 | p94calpain 315q15.1CV:PGCnp
84978FRMD5-FERM domain containing 515q15.3CV:PGCnp
DMG:Nishioka_2013
1854DUTdUTPasedeoxyuridine triphosphatase15q21.1CV:GWASdb
DMG:vanEijk_2014
PMID:cooccur
440279UNC13C-unc-13 homolog C (C. elegans)15q21.3CV:PGCnp
DNM:Xu_2012
GO_Annotation
PMID:cooccur
CANABINOID
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
CompositeSet
Darnell FMRP targets
54629FAM63B-family with sequence similarity 63 member B15q21.3CV:PGCnp
PMID:cooccur
388125C2CD4BFAM148B | NLF2C2 calcium-dependent domain containing 4B15q22.2CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
5607MAP2K5HsT17454 | MAPKK5 | MEK5 | PRKMK5mitogen-activated protein kinase kinase 515q23CV:PGCnp
1143CHRNB4-cholinergic receptor nicotinic beta 4 subunit15q24CV:PGCnp
GO_Annotation
PMID:cooccur
1543CYP1A1AHH | AHRR | CP11 | CYP1 | CYPIA1 | P1-450 | P450-C | P450DXcytochrome P450 family 1 subfamily A member 115q24.1CV:PGCnp
CV:PheWAS
PMID:cooccur
9051PSTPIP1CD2BP1 | CD2BP1L | CD2BP1S | H-PIP | PAPAS | PSTPIPproline-serine-threonine phosphatase interacting protein 115q24.3CV:PGCnp
GO_Annotation
4916NTRK3GP145-TrkC | TRKC | gp145(trkC)neurotrophic tyrosine kinase, receptor, type 315q25CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
9154SLC28A1CNT1 | HCNT1solute carrier family 28 member 115q25.3CV:PGCnp
1133CHRM5HM5cholinergic receptor muscarinic 515q26ADT:Sun_2012
Association
CV:PGCnp
GO_Annotation
PMID:cooccur
176ACANAGC1 | AGCAN | CSPG1 | CSPGCP | MSK16 | SEDKaggrecan15q26.1CV:PGCnpG2Cdb.human_mGluR5
5045FURINFUR | PACE | PCSK3 | SPC1furin, paired basic amino acid cleaving enzyme15q26.1CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
Network
3480IGF1RCD221 | IGFIR | IGFR | JTK13insulin like growth factor 1 receptor15q26.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
1339COX6A2COX6AH | COXVIAHcytochrome c oxidase subunit 6A216p11.12DMG:Wockner_2014
GSMA_IIE
253980KCTD13BACURD1 | FKSG86 | PDIP1 | POLDIP1 | hBACURD1potassium channel tetramerization domain containing 1316p11.2CNV:YES
CV:GWAScat
CV:PGC128
CV:PGCnp
GSMA_IIE
PMID:cooccur
5579PRKCBPKC-beta | PKCB | PRKCB1 | PRKCB2protein kinase C beta16p11.2CV:PGCnp
DMG:Jaffe_2016
DNM:Xu_2012
Network
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5595MAPK3ERK-1 | ERK1 | ERT2 | HS44KDAP | HUMKER1A | P44ERK1 | P44MAPK | PRKM3 | p44-ERK1 | p44-MAPKmitogen-activated protein kinase 316p11.2CNV:YES
CV:PGCnp
GSMA_IIE
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
653808ZG16JCLN | JCLN1 | ZG16Azymogen granule protein 1616p11.2CNV:YES
CV:PGCnp
GSMA_IIE
25970SH2B1PSM | SH2BSH2B adaptor protein 116p11.2CV:PGCnp
Expression
GSMA_IIE
PMID:cooccur
343AQP8AQP-8aquaporin 816p12CV:PGCnp
GSMA_IIE
6340SCNN1GBESC3 | ENaCg | ENaCgamma | PHA1 | SCNEGsodium channel epithelial 1 gamma subunit16p12CV:PGCnp
GSMA_IIE
2813GP2ZAP75glycoprotein 216p12CV:GWASdb
CV:PGCnp
GSMA_IIE
4706NDUFAB1ACP | FASN2A | SDAPNADH:ubiquinone oxidoreductase subunit AB116p12.2CV:PGCnp
Expression
GSMA_IIE
PMID:cooccur
10229COQ7CAT5 | CLK-1 | CLK1 | COQ10D8coenzyme Q7 homolog, ubiquinone (yeast)16p12.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
18ABATGABA-AT | GABAT | NPD0094-aminobutyrate aminotransferase16p13.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
3483IGFALSACLSD | ALSinsulin like growth factor binding protein acid labile subunit16p13.3CV:PGCnp
8912CACNA1HCACNA1HB | Cav3.2 | ECA6 | EIG6calcium voltage-gated channel subunit alpha1 H16p13.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
9028RHBDL1RHBDL | RRPrhomboid, veinlet-like 1 (Drosophila)16p13.3CV:PGCnp
GO_Annotation
6530SLC6A2NAT1 | NET | NET1 | SLC6A5solute carrier family 6 member 216q12.2ADT:Sun_2012
CV:PGCnp
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
4504MT3GIF | GIFB | GRIF | ZnMT3metallothionein 316q13CV:PGCnp
GO_Annotation
PMID:cooccur
51090PLLPPMLP | TM4SF11plasmolipin16q13CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
65009NDRG4BDM1 | SMAP-8 | SMAP8NDRG family member 416q21CV:PGCnpCompositeSet
Darnell FMRP targets
8883NAE1A-116A10.1 | APPBP1 | HPP1 | ula-1NEDD8 activating enzyme E1 subunit 116q22CV:PGCnp
3291HSD11B2AME | AME1 | HSD11K | HSD2 | SDR9C3hydroxysteroid (11-beta) dehydrogenase 216q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
PMID:cooccur
1006CDH8Nbla04261cadherin 816q22.1CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
1014CDH16-cadherin 1616q22.1CV:PGCnpCELL ADHESION AND TRANSSYNAPTIC SIGNALING
1783DYNC1LI2DNCLI2 | LIC2dynein cytoplasmic 1 light intermediate chain 216q22.1CV:PGCnpCompositeSet
1506CTRLCTRL1chymotrypsin-like16q22.1CV:PGCnp
GO_Annotation
PMID:cooccur
6898TAT-tyrosine aminotransferase16q22.1CV:PGCnp
DEG:Zhao_2015
GO_Annotation
PMID:cooccur
3240HPBP | HP2ALPHA2 | HPA1Shaptoglobin16q22.2Association
Core
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
794CALB2CAB29 | CAL2 | CRcalbindin 216q22.2CV:PGCnpG2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
83449PMFBP1-polyamine modulated factor 1 binding protein 116q22.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
9564BCAR1CAS | CAS1 | CASS1 | CRKAS | P130Casbreast cancer anti-estrogen resistance 116q23.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Ascano FMRP targets
55159RFWD3RNF201ring finger and WD repeat domain 316q23.1CV:PGCnp
1327COX4I1COX IV-1 | COX4 | COX4-1 | COXIV | COXIV-1cytochrome c oxidase subunit 4I116q24.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
5336PLCG2APLAID | FCAS3 | PLC-IV | PLC-gamma-2phospholipase C gamma 216q24.1CV:GWASdb
CV:PGCnp
PMID:cooccur
5119CHMP1ACHMP1 | PCH8 | PCOLN3 | PRSM1 | VPS46-1 | VPS46Acharged multivesicular body protein 1A16q24.3CV:PGCnp
1800DPEP1MBD1 | MDP | RDPdipeptidase 1 (renal)16q24.3CV:PGCnp
GO_Annotation
7732RNF112BFP | ZNF179ring finger protein 11217p11.2CV:PGCnp
5636PRPSAP2PAP41phosphoribosyl pyrophosphate synthetase-associated protein 217p11.2-p12CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
25979DHRS7BCGI-93 | SDR32C1dehydrogenase/reductase (SDR family) member 7B17p12CV:PGCnpG2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
409ARRB2ARB2 | ARR2 | BARR2arrestin, beta 217p13CV:PGCnp
DNM:Guipponi_2014
PMID:cooccur
6517SLC2A4GLUT4solute carrier family 2 member 417p13CV:PGCnp
3682ITGAECD103 | HUMINAEintegrin subunit alpha E17p13CV:PGCnp
DMG:Wockner_2014
57555NLGN2-neuroligin 217p13.1CV:PGCnp
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
8522GAS7MLL/GAS7growth arrest specific 717p13.1CV:PGCnp
DMG:Montano_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
9196KCNAB3AKR6A9 | KCNA3.1B | KCNA3B | KV-BETA-3potassium voltage-gated channel subfamily A regulatory beta subunit 317p13.1CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
1366CLDN7CEPTRL2 | CLDN-7 | CPETRL2 | Hs.84359 | claudin-1claudin 717p13.1CV:PGCnp
GO_Annotation
482ATP1B2AMOGATPase Na+/K+ transporting subunit beta 217p13.1CV:GWASdb
CV:PGCnp
ION BALANCE
CompositeSet
6844VAMP2SYB2 | VAMP-2vesicle associated membrane protein 217p13.1DEG:Maycox_2009
GO_Annotation
PMID:cooccur
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.human_TAP-PSD-95-CORE
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1140CHRNB1ACHRB | CHRNB | CMS1D | CMS2A | CMS2C | SCCMScholinergic receptor nicotinic beta 1 subunit17p13.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
5338PLD2-phospholipase D217p13.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
9135RABEP1RAB5EP | RABPT5rabaptin, RAB GTPase binding effector protein 117p13.2CV:PGCnpINTRACELLULAR TRAFFICKING
G2Cdb.humanPSD
G2Cdb.humanPSP
432ASGR1ASGPR | ASGPR1 | CLEC4H1 | HL-1asialoglycoprotein receptor 117p13.2CV:PGCnp
7442TRPV1VR1transient receptor potential cation channel subfamily V member 117p13.2CV:PGCnp
DEG:Zhao_2015
Network
PMID:cooccur
51031GLOD4C17orf25 | CGI-150 | HC71glyoxalase domain containing 417p13.3CV:PGCnp
246ALOX1512-LOX | 15-LOX-1 | 15LOX-1arachidonate 15-lipoxygenase17p13.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
11232POLG2HP55 | MTPOLB | PEOA4 | POLB | POLG-BETA | POLGBpolymerase (DNA) gamma 2, accessory subunit17qCV:PGCnp
DMG:Jaffe_2016
4843NOS2HEP-NOS | INOS | NOS | NOS2Anitric oxide synthase 217q11.2CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
8851CDK5R1CDK5P35 | CDK5R | NCK5A | p23 | p25 | p35 | p35nck5acyclin-dependent kinase 5, regulatory subunit 1 (p35)17q11.2CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
4763NF1NFNS | VRNF | WSSneurofibromin 117q11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
6347CCL2GDCF-2 | HC11 | HSMCR30 | MCAF | MCP-1 | MCP1 | SCYA2 | SMC-CFC-C motif chemokine ligand 217q11.2-q12CV:PGCnp
Expression
PMID:cooccur
6352CCL5D17S136E | RANTES | SCYA5 | SIS-delta | SISd | TCP228 | eoCPC-C motif chemokine ligand 517q12DMG:vanEijk_2014
PMID:cooccur
6356CCL11SCYA11C-C motif chemokine ligand 1117q12CV:PGCnp
PMID:cooccur
782CACNB1CAB1 | CACNLB1 | CCHLB1calcium voltage-gated channel auxiliary subunit beta 117q12CV:PGCnpCANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2064ERBB2CD340 | HER-2 | HER-2/neu | HER2 | MLN 19 | NEU | NGL | TKR1erb-b2 receptor tyrosine kinase 217q12CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
Ascano FMRP targets
8396PIP4K2BPI5P4KB | PIP5K2B | PIP5KIIB | PIP5KIIbeta | PIP5P4KBphosphatidylinositol-5-phosphate 4-kinase, type II, beta17q12CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6928HNF1BFJHN | HNF-1-beta | HNF-1B | HNF1beta | HNF2 | HPC11 | LF-B3 | LFB3 | MODY5 | TCF-2 | TCF2 | VHNF1HNF1 homeobox B17q12CNV:YES
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6348CCL3G0S19-1 | LD78ALPHA | MIP-1-alpha | MIP1A | SCYA3C-C motif chemokine ligand 317q12PMID:cooccur
5245PHBHEL-215 | HEL-S-54e | PHB1prohibitin17q21CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
2670GFAPALXDRDglial fibrillary acidic protein17q21CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
5914RARANR1B1 | RARretinoic acid receptor alpha17q21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3060HCRTNRCLP1 | OX | PPOXhypocretin (orexin) neuropeptide precursor17q21GO_Annotation
PMID:cooccur
4804NGFRCD271 | Gp80-LNGFR | TNFRSF16 | p75(NTR) | p75NTRnerve growth factor receptor17q21-q22CV:PGCnp
GO_Annotation
PMID:cooccur
4137MAPTDDPAC | FTDP-17 | MAPTL | MSTD | MTBT1 | MTBT2 | PPND | PPP1R103 | TAUmicrotubule associated protein tau17q21.1CV:PGCnp
CV:PheWAS
GO_Annotation
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
5697PYYPYY-I | PYY1peptide YY17q21.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
9001HAP1HAP2 | HIP5 | HLP | hHLP1huntingtin-associated protein 117q21.2-q21.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
2695GIP-gastric inhibitory polypeptide17q21.3-q22CV:PGCnp
PMID:cooccur
1394CRHR1CRF-R | CRF-R-1 | CRF-R1 | CRF1 | CRFR-1 | CRFR1 | CRH-R-1 | CRH-R1 | CRHR | CRHR1Lcorticotropin releasing hormone receptor 117q21.31CV:PGCnp
PMID:cooccur
GPCR SIGNALLING
6521SLC4A1AE1 | BND3 | CD233 | CHC | DI | EMPB3 | EPB3 | FR | RTA1A | SAO | SPH4 | SW | WD | WD1 | WRsolute carrier family 4 member 1 (Diego blood group)17q21.31CV:PGCnp
Network
ION BALANCE
9343EFTUD2MFDGA | MFDM | SNRNP116 | Snrp116 | Snu114 | U5-116KDelongation factor Tu GTP binding domain containing 217q21.31CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
4356MPP3DLG3membrane protein, palmitoylated 317q21.31PMID:cooccurPROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
3690ITGB3BDPLT16 | BDPLT2 | CD61 | GP3A | GPIIIa | GTintegrin subunit beta 317q21.32CV:PGCnp
Network
PMID:cooccur
8165AKAP1AKAP | AKAP121 | AKAP149 | AKAP84 | D-AKAP1 | PPP1R43 | PRKA1 | SAKAP84 | TDRD17A-kinase anchoring protein 117q22CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
7716VEZF1DB1 | ZNF161vascular endothelial zinc finger 117q22CV:PGCnp
DMG:Jaffe_2016
11325DDX42DDX42P | RHELP | RNAHP | SF3B8 | SF3b125DEAD-box helicase 4217q23.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Ascano FMRP targets
1636ACEACE1 | CD143 | DCP | DCP1 | ICH | MVCD3angiotensin I converting enzyme17q23.3CV:PGCnp
Network
PMID:cooccur
90799CEP95CCDC45centrosomal protein 95kDa17q23.3DMG:Jaffe_2016
6329SCN4ACMS16 | HOKPP2 | HYKPP | HYPP | NAC1A | Na(V)1.4 | Nav1.4 | SkM1sodium voltage-gated channel alpha subunit 417q23.3CV:GWASdb
CV:PGCnp
G2Cdb.humanPSD
G2Cdb.humanPSP
6752SSTR2-somatostatin receptor 217q24CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
8787RGS9PERRS | RGS9Lregulator of G-protein signaling 917q24.1CV:PGCnp
PMID:cooccur
5578PRKCAAAG6 | PKC-alpha | PKCA | PRKACAprotein kinase C alpha17q24.2CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Network
PMID:cooccur
CANABINOID
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
2688GH1GH | GH-N | GHB5 | GHN | IGHD1B | hGH-Ngrowth hormone 117q24.2CV:PGCnp
Network
PMID:cooccur
3759KCNJ2ATFB9 | HHBIRK1 | HHIRK1 | IRK1 | KIR2.1 | LQT7 | SQT3potassium voltage-gated channel subfamily J member 217q24.3CV:PGCnp
DEG:Zhao_2015
Network
1453CSNK1DASPS | CKIdelta | FASPS2 | HCKIDcasein kinase 1 delta17q25DMG:Wockner_2014
Network
PMID:cooccur
3959LGALS3BP90K | BTBD17B | CyCAP | M2BP | MAC-2-BP | TANGO10B | gp90lectin, galactoside-binding, soluble, 3 binding protein17q25CV:PGCnp
DMG:vanEijk_2014
2232FDXRADXRferredoxin reductase17q25.1DMG:Wockner_2014
9021SOCS3ATOD4 | CIS3 | Cish3 | SOCS-3 | SSI-3 | SSI3suppressor of cytokine signaling 317q25.3CV:PGCnp
PMID:cooccur
116ADCYAP1PACAPadenylate cyclase activating polypeptide 1 (pituitary)18p11Association
CV:PGCnp
GO_Annotation
PMID:cooccur
2774GNALDYT25G protein subunit alpha L18p11.22-p11.21Association
CV:PGCnp
GO_Annotation
PMID:cooccur
G-PROTEIN RELAY
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10928RALBP1RIP1 | RLIP1 | RLIP76ralA binding protein 118p11.3CV:PGCnp
DMG:Jaffe_2016
103910MYL12BMLC-B | MRLC2myosin light chain 12B18p11.31CV:GWASdb
CV:PGCnp
Potential synaptic genes
9229DLGAP1DAP-1 | DAP-1-ALPHA | DAP-1-BETA | DAP1 | DLGAP1A | DLGAP1B | GKAP | SAPAP1discs large homolog associated protein 118p11.31CV:PGCnp
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
79822ARHGAP28-Rho GTPase activating protein 2818p11.31CV:PGCnp
4225MEP1B-meprin A subunit beta18q12.2-q12.3CV:PGCnp
4645MYO5B-myosin VB18q21CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
Potential synaptic genes
596BCL2Bcl-2 | PPP1R50B-cell CLL/lymphoma 218q21.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
9170LPAR2EDG-4 | EDG4 | LPA-2 | LPA2lysophosphatidic acid receptor 219p12CV:PGCnp
DMG:Jaffe_2016
LK:YES
1463NCANCSPG3neurocan19p12CV:PGCnp
DMG:Jaffe_2016
DNM:Gulsuner_2013
LK:YES
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
773CACNA1AAPCA | BI | CACNL1A4 | CAV2.1 | EA2 | FHM | HPCA | MHP | MHP1 | SCA6calcium voltage-gated channel subunit alpha1 A19p13CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
CANABINOID
DOPAMINE
EXCITABILITY
SEROTONIN
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
5731PTGER1EP1prostaglandin E receptor 119p13.1DMG:Wockner_2014
1311COMPEDM1 | EPD1 | MED | PSACH | THBS5cartilage oligomeric matrix protein19p13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10755GIPC1C19orf3 | GIPC | GLUT1CBP | Hs.6454 | IIP-1 | NIP | RGS19IP1 | SEMCAP | SYNECTIIN | SYNECTIN | TIP-2GIPC PDZ domain containing family member 119p13.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
23025UNC13AMunc13-1unc-13 homolog A (C. elegans)19p13.11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GO_Annotation
CANABINOID
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
5143PDE4CDPDE1phosphodiesterase 4C19p13.11CV:PGCnp
PMID:cooccur
57130ATP13A1ATP13A | CGI-152ATPase 13A119p13.11CV:PGCnp
8529CYP4F2CPF2cytochrome P450 family 4 subfamily F member 219p13.12CV:PGCnp
6511SLC1A6EAAT4solute carrier family 1 member 619p13.12Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
Potential synaptic genes
5141PDE4ADPDE2 | PDE4 | PDE46phosphodiesterase 4A19p13.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5864RAB3A-RAB3A, member RAS oncogene family19p13.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
2057EPOREPO-Rerythropoietin receptor19p13.2GO_Annotation
PMID:cooccur
11140CDC37P50CDC37cell division cycle 3719p13.2CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
Network
3727JUNDAP-1jun D proto-oncogene19p13.2CV:PGCnp
PMID:cooccur
4782NFICCTF | CTF5 | NF-I | NFInuclear factor I/C (CCAAT-binding transcription factor)19p13.3CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
1938EEF2EEF-2 | EF-2 | EF2 | SCA26eukaryotic translation elongation factor 219p13.3DMG:Jaffe_2016
DMG:vanEijk_2014
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
2879GPX4GPx-4 | GSHPx-4 | MCSP | PHGPx | SMDS | snGPx | snPHGPxglutathione peroxidase 419p13.3CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
8174MADCAM1MACAM1mucosal vascular addressin cell adhesion molecule 119p13.3DMG:Jaffe_2016
6209RPS15RIG | S15ribosomal protein S1519p13.3DMG:Nishioka_2013G2Cdb.humanPSD
G2Cdb.humanPSP
166AESAES-1 | AES-2 | ESP1 | GRG | GRG5 | Grg-5 | TLE5amino-terminal enhancer of split19p13.3CV:PGCnp
PMID:cooccur
5605MAP2K2CFC4 | MAPKK2 | MEK2 | MKK2 | PRKMK2mitogen-activated protein kinase kinase 219p13.3DMG:Wockner_2014
Network
PMID:cooccur
CANABINOID
DOPAMINE
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
9322TRIP10CIP4 | HSTP | STOT | STP | TRIP-10thyroid hormone receptor interactor 1019p13.3DMG:Wockner_2014
2767GNA11FBH | FBH2 | FHH2 | GNA-11 | HHC2 | HYPOC2G protein subunit alpha 1119p13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
2788GNG7-G protein subunit gamma 719p13.3CV:PGCnp
DEG:Sanders_2013
DMG:Wockner_2014
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
6915TBXA2RBDPLT13 | TXA2-Rthromboxane A2 receptor19p13.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
Network
CompositeSet
6929TCF3E2A | E47 | ITF1 | TCF-3 | VDIR | bHLHb21transcription factor 319p13.3CV:PGCnp
DMG:Montano_2016
DMG:vanEijk_2014
7386UQCRFS1RIP1 | RIS1 | RISP | UQCR5ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 119q12CV:GWASdb
CV:PGCnp
10683DLL3SCDO1delta-like 3 (Drosophila)19q13CV:PGCnp
DMG:Wockner_2014
5329PLAURCD87 | U-PAR | UPAR | URKRplasminogen activator, urokinase receptor19q13CV:PGCnp
PMID:cooccur
58510PRODH2HSPOX1 | HYPDHproline dehydrogenase (oxidase) 219q13.1GO_Annotation
PMID:cooccur
4099MAGGMA | S-MAG | SIGLEC-4A | SIGLEC4A | SPG75myelin associated glycoprotein19q13.1Association
CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
1050CEBPAC/EBP-alpha | CEBPCCAAT/enhancer binding protein alpha19q13.1CV:PGCnp
6324SCN1BATFB13 | BRGDA5 | GEFSP1sodium voltage-gated channel beta subunit 119q13.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
EXCITABILITY
11184MAP4K1HPK1mitogen-activated protein kinase kinase kinase kinase 119q13.1-q13.4CV:PGCnp
348APOEAD2 | APO-E | LDLCQ5 | LPGapolipoprotein E19q13.2Association
Core
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
CELL METABOLISM
CompositeSet
Darnell FMRP targets
8193DPF1BAF45b | NEUD4 | neuro-d4double PHD fingers 119q13.2CV:PGCnp
DMG:Nishioka_2013
29888STRN4ZIN | zinedinstriatin 419q13.2CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
55095SAMD4BSMGB | Smaug2sterile alpha motif domain containing 4B19q13.2CV:PGCnpCompositeSet
Darnell FMRP targets
22952CYP2G1PCYP2G1 | CYP2G2P | CYP2GP1cytochrome P450 family 2 subfamily G member 1, pseudogene19q13.2CV:PGCnp
1555CYP2B6CPB6 | CYP2B | CYP2B7 | CYP2B7P | CYPIIB6 | EFVM | IIB1 | P450cytochrome P450 family 2 subfamily B member 619q13.2CV:PGCnp
PMID:cooccur
808CALM3HEL-S-72 | PHKD | PHKD3calmodulin 3 (phosphorylase kinase, delta)19q13.2-q13.3CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
CompositeSet
Darnell FMRP targets
2523FUT1H | HH | HSCfucosyltransferase 1 (H blood group)19q13.3CV:PGCnp
1628DBPDABPD site of albumin promoter (albumin D-box) binding protein19q13.3CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
64130LIN7BLIN-7B | MALS-2 | MALS2 | VELI2lin-7 homolog B, crumbs cell polarity complex component19q13.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
581BAXBCL2L4BCL2-associated X protein19q13.3-q13.4GO_Annotation
PMID:cooccur
478ATP1A3AHC2 | CAPOS | DYT12 | RDPATPase Na+/K+ transporting subunit alpha 319q13.31CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
3972LHBCGB4 | HH23 | LSH-B | LSH-betaluteinizing hormone beta polypeptide19q13.32PMID:cooccur
2906GRIN2DEB11 | GluN2D | NMDAR2D | NR2Dglutamate ionotropic receptor NMDA type subunit 2D19q13.33Association
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
53635PTOV1ACID2 | PTOV-1prostate tumor overexpressed 119q13.33CV:PGCnp
DMG:vanEijk_2014
3661IRF3IIAE7interferon regulatory factor 319q13.33CV:PGCnp
PMID:cooccur
3748KCNC3KSHIIID | KV3.3 | SCA13potassium voltage-gated channel subfamily C member 319q13.33CV:PGCnp
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
5794PTPRHR-PTP-H | SAP1protein tyrosine phosphatase, receptor type H19q13.4CV:PGCnp
7137TNNI3CMD1FF | CMD2A | CMH7 | RCM1 | TNNC1 | cTnItroponin I3, cardiac type19q13.4CV:PGCnp
GO_Annotation
5518PPP2R1AMRD36 | PP2A-Aalpha | PP2AAALPHA | PR65Aprotein phosphatase 2 regulatory subunit A, alpha19q13.41CV:GWASdb
CV:PGCnp
Network
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
29924EPN1-epsin 119q13.42CV:PGCnp
DMG:vanEijk_2014
Network
CompositeSet
Darnell FMRP targets
9040UBE2MUBC-RS2 | UBC12 | hUbc12ubiquitin conjugating enzyme E2 M19q13.43CV:PGCnp
DMG:Wockner_2014
963CD53MOX44 | TSPAN25CD53 molecule1p13CV:GWASdb
CV:PGCnp
GSMA_I
270AMPD1MAD | MADA | MMDDadenosine monophosphate deaminase 11p13CV:PGCnp
GSMA_I
GSMA_IIA
4803NGFBeta-NGF | HSAN5 | NGFBnerve growth factor1p13.1CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
79679VTCN1B7-H4 | B7H4 | B7S1 | B7X | B7h.5 | PRO1291 | VCTN1V-set domain containing T cell activation inhibitor 11p13.1CV:PGCnp
GSMA_I
GSMA_IIA
3283HSD3B13BETAHSD | HSD3B | HSDB3 | HSDB3A | I | SDR11E1hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 11p13.1CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
140ADORA3A3ARadenosine A3 receptor1p13.2CV:PGCnp
GSMA_I
PMID:cooccur
3752KCND3BRGDA9 | KCND3L | KCND3S | KSHIVB | KV4.3 | SCA19 | SCA22potassium voltage-gated channel subfamily D member 31p13.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
2944GSTM1GST1 | GSTM1-1 | GSTM1a-1a | GSTM1b-1b | GTH4 | GTM1 | H-B | MU | MU-1glutathione S-transferase mu 11p13.3Association
CV:PGCnp
GR_COR
GR_Ng
GR_WM
PMID:cooccur
3738KCNA3HGK5 | HLK3 | HPCN3 | HUKIII | KV1.3 | MK3 | PCN3potassium voltage-gated channel subfamily A member 31p13.3CV:GWASdb
CV:PGCnp
GSMA_I
476ATP1A1-ATPase Na+/K+ transporting subunit alpha 11p21CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanARC
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
2135EXTL2EXTR2exostosin-like glycosyltransferase 21p21CV:PGCnp
2672GFI1GFI-1 | GFI1A | SCN2 | ZNF163growth factor independent 1 transcription repressor1p22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
11146GLMNFAP | FAP48 | FAP68 | FKBPAP | GLML | GVM | VMGLOMglomulin, FKBP associated protein1p22.1CV:PGCnp
343472BARHL2-BarH like homeobox 21p22.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5142PDE4BDPDE4 | PDEIVBphosphodiesterase 4B1p31Association
CV:GWASdb
CV:PGCnp
GR_Ng
GSMA_IIA
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3953LEPRCD295 | LEP-R | LEPRD | OB-R | OBRleptin receptor1p31CV:PGCnp
GSMA_IIA
PMID:cooccur
57554LRRC7DENSINleucine rich repeat containing 71p31.1CV:PGCnp
GSMA_IIA
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
256435ST6GALNAC3PRO7177 | SIAT7C | ST6GALNACIII | STYST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 31p31.1CV:PGCnp
GSMA_IIA
PMID:cooccur
5733PTGER3EP3 | EP3-I | EP3-II | EP3-III | EP3-IV | EP3-VI | EP3e | PGE2-Rprostaglandin E receptor 31p31.2CV:PGCnp
GSMA_IIA
PMID:cooccur
27022FOXD3AIS1 | Genesis | HFH2 | VAMAS2forkhead box D31p31.3GSMA_IIA
PMID:cooccur
55277FGGY-FGGY carbohydrate kinase domain containing1p32.1CV:GWAScat
CV:PGCnp
51361HOOK1HK1hook microtubule-tethering protein 11p32.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
GSMA_IIA
6536SLC6A9GLYT1solute carrier family 6 member 91p33CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
NEUROTRANSMITTER METABOLISM
7049TGFBR3BGCAN | betaglycantransforming growth factor beta receptor III1p33-p32CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
1907EDN2ET-2 | ET2 | PPET2endothelin 21p34CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
5792PTPRFBNAH2 | LARprotein tyrosine phosphatase, receptor type F1p34CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
1996ELAVL4HUD | PNEMELAV like neuron-specific RNA binding protein 41p34CV:PGCnp
PMID:cooccur
2707GJB3CX31 | DFNA2 | DFNA2B | EKVgap junction protein beta 31p34CV:PGCnp
DMG:Jaffe_2016
204AK2ADK2adenylate kinase 21p34CV:PGCnp
Network
2981GUCA2BGCAP-II | UGNguanylate cyclase activator 2B1p34-p33CV:PGCnp
DMG:Wockner_2014
6487ST3GAL3EIEE15 | MRT12 | SIAT6 | ST3GALII | ST3GalIII | ST3NST3 beta-galactoside alpha-2,3-sialyltransferase 31p34.1CV:GWASdb
CV:PGCnp
149466C1orf210TEMPchromosome 1 open reading frame 2101p34.2CV:PGCnp
51440HPCAL4HLP4hippocalcin like 41p34.2CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
INTRACELLULAR SIGNAL TRANSDUCTION
5690PSMB2HC7-Iproteasome subunit beta 21p34.2CV:PGCnp
PMID:cooccur
2166FAAHFAAH-1 | PSABfatty acid amide hydrolase1p35-p34CV:PGCnp
GO_Annotation
PMID:cooccur
10076PTPRUFMI | PCP-2 | PTP | PTP-J | PTP-PI | PTP-RO | PTPPSI | PTPRO | PTPU2 | R-PTP-PSI | R-PTP-U | hPTP-Jprotein tyrosine phosphatase, receptor type U1p35.3CV:GWASdb
CV:PGCnp
Network
51102MECRCGI-63 | FASN2B | NRBF1mitochondrial trans-2-enoyl-CoA reductase1p35.3CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
58512DLGAP3DAP3 | SAPAP3discs large homolog associated protein 31p35.3-p34.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
CompositeSet
Darnell FMRP targets
Potential synaptic genes
11332ACOT7ACH1 | ACT | BACH | CTE-II | LACH | LACH1 | hBACHacyl-CoA thioesterase 71p36CV:PGCnp
DMG:Jaffe_2016
1188CLCNKBCLCKB | ClC-K2 | ClC-Kbchloride voltage-gated channel Kb1p36CV:PGCnp
DMG:Wockner_2014
54206ERRFI1GENE-33 | MIG-6 | MIG6 | RALTERBB receptor feedback inhibitor 11p36CV:PGCnp
DMG:Nishioka_2013
8431NR0B2SHP | SHP1nuclear receptor subfamily 0 group B member 21p36.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
6924TCEB3EloA | SIII | SIII p110 | TCEB3Atranscription elongation factor B subunit 31p36.1CV:PGCnp
DMG:Jaffe_2016
4985OPRD1OPRDopioid receptor, delta 11p36.1-p34.3CV:PGCnp
GO_Annotation
Network
PMID:cooccur
GPCR SIGNALLING
6135RPL11DBA7 | GIG34 | L11ribosomal protein L111p36.1-p35CV:PGCnp
DMG:vanEijk_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
6007RHDCD240D | DIIIc | RH | RH30 | RHCED | RHDVA(TT) | RHDel | RHPII | RHXIII | Rh4 | RhDCw | RhII | RhK562-II | RhPIRh blood group D antigen1p36.11PMID:cooccur
713C1QB-complement component 1, q subcomponent, B chain1p36.12CV:PGCnp
PMID:cooccur
249ALPLAP-TNAP | APTNAP | HOPS | TNAP | TNSALPalkaline phosphatase, liver/bone/kidney1p36.12CV:PGCnp
DMG:Wockner_2014
11240PADI2PAD-H19 | PAD2 | PDI2peptidyl arginine deiminase, type II1p36.13CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
29943PADI1HPAD10 | PAD1 | PDI | PDI1peptidyl arginine deiminase, type I1p36.13CV:PGCnp
DMG:Wockner_2014
51107APH1A6530402N02Rik | APH-1 | APH-1A | CGI-78aph-1 homolog A, gamma secretase subunit1p36.13-q31.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
NEUROTROPHIN SIGNALING
765CA6CA-VI | GUSTINcarbonic anhydrase VI1p36.2CV:PGCnp
5293PIK3CDAPDS | IMD14 | P110DELTA | PI3K | p110Dphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta1p36.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
4878NPPAANF | ANP | ATFB6 | ATRST2 | CDD | CDD-ANF | CDP | PNDnatriuretic peptide A1p36.21CV:PGCnp
1325CORTCST-14 | CST-17 | CST-29cortistatin1p36.22DMG:Wockner_2014
GO_Annotation
PMID:cooccur
26232FBXO2FBG1 | FBX2 | Fbs1 | NFB42 | OCP1F-box protein 21p36.22CV:GWASdb
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
11315PARK7DJ-1 | DJ1 | HEL-S-67pParkinsonism associated deglycase1p36.23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
2563GABRDEIG10 | EJM7 | GEFSP5gamma-aminobutyric acid type A receptor delta subunit1p36.3CV:PGCnp
GO_Annotation
PMID:cooccur
4524MTHFR-methylenetetrahydrofolate reductase (NAD(P)H)1p36.3Association
Core
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
8514KCNAB2AKR6A5 | HKvbeta2 | HKvbeta2.1 | HKvbeta2.2 | KCNA2B | KV-BETA-2potassium voltage-gated channel subfamily A regulatory beta subunit 21p36.3CV:PGCnp
DMG:Wockner_2014
EXCITABILITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
390992HES3bHLHb43hes family bHLH transcription factor 31p36.31DMG:Jaffe_2016
DMG:Wockner_2014
388585HES5bHLHb38hes family bHLH transcription factor 51p36.32CV:PGCnp
GO_Annotation
PMID:cooccur
5590PRKCZPKC-ZETA | PKC2protein kinase C zeta1p36.33-p36.2CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
INTRACELLULAR SIGNAL TRANSDUCTION
4209MEF2D-myocyte enhancer factor 2D1q12-q23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
Darnell FMRP targets
405ARNTHIF-1-beta | HIF-1beta | HIF1-beta | HIF1B | HIF1BETA | TANGO | bHLHe2aryl hydrocarbon receptor nuclear translocator1q21CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
5692PSMB4HN3 | HsN3 | PROS-26 | PROS26proteasome subunit beta 41q21CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
4881NPR1ANPRA | ANPa | GUC2A | GUCY2A | NPRAnatriuretic peptide receptor 11q21-q22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
3645INSRRIRRinsulin receptor-related receptor1q21-q23CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_I
GSMA_IIA
CompositeSet
2702GJA5ATFB11 | CX40gap junction protein alpha 51q21.1CNV:YES
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
3782KCNN3KCa2.3 | SK3 | SKCA3 | hSK3potassium calcium-activated channel subfamily N member 31q21.3Association
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
PMID:cooccur
103ADARADAR1 | AGS6 | DRADA | DSH | DSRAD | G1P1 | IFI-4 | IFI4 | K88DSRBP | P136adenosine deaminase, RNA-specific1q21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
1141CHRNB2EFNL3 | nAChRB2cholinergic receptor nicotinic beta 2 subunit1q21.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
LIGAND GATED ION SIGNALING
4259MGST3GST-IIImicrosomal glutathione S-transferase 31q23CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
RNA AND PROTEIN SYNTHESIS
G2Cdb.humanPSD
G2Cdb.humanPSP
3765KCNJ9GIRK3 | KIR3.3potassium voltage-gated channel subfamily J member 91q23.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
Network
CANABINOID
EXCITABILITY
SEROTONIN
3766KCNJ10BIRK-10 | KCNJ13-PEN | KIR1.2 | KIR4.1 | SESAMEpotassium voltage-gated channel subfamily J member 101q23.2CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
EXCITABILITY
1401CRPPTX1C-reactive protein, pentraxin-related1q23.2CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
7143TNRTN-Rtenascin R1q24CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Potential synaptic genes
5451POU2F1OCT1 | OTF1 | oct-1BPOU class 2 homeobox 11q24.2CV:PGCnp
DMG:Wockner_2014
919CD247CD3-ZETA | CD3H | CD3Q | CD3Z | IMD25 | T3Z | TCRZCD247 molecule1q24.2CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
85397RGS8-regulator of G-protein signaling 81q25CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
5208PFKFB2PFK-2/FBPase-26-phosphofructo-2-kinase/fructose-2,6-biphosphatase 21q31CV:PGCnp
Network
PMID:cooccur
63827BCANBEHAB | CSPG7brevican1q31CV:PGCnp
DMG:Wockner_2014
Expression
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
5996RGS11R20 | BL34 | HEL-S-87 | IER1 | IR20regulator of G-protein signaling 11q31CV:GWASdb
CV:PGCnp
3586IL10CSIF | GVHDS | IL-10 | IL10A | TGIFinterleukin 101q31-q32Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
9580SOX13ICA12 | Sox-13SRY-box 131q32CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
5972RENHNFJ2renin1q32CV:PGCnp
GO_Annotation
PMID:cooccur
553AVPR1BAVPR3arginine vasopressin receptor 1B1q32CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
127833SYT2CMS7 | MYSPC | SytIIsynaptotagmin 21q32.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
5877RABIFMSS4 | RASGFR3 | RASGRF3RAB interacting factor1q32.1DMG:Jaffe_2016INTRACELLULAR TRAFFICKING
2494NR5A2B1F | B1F2 | CPF | FTF | FTZ-F1 | FTZ-F1beta | LRH-1 | LRH1 | hB1F-2nuclear receptor subfamily 5 group A member 21q32.1CV:PGCnp
DMG:Jaffe_2016
55509BATF3JDP1 | JUNDM1 | SNFTbasic leucine zipper ATF-like transcription factor 31q32.3CV:PGCnp
DMG:Jaffe_2016
10380BPNT1HEL20 | PIP3'(2'), 5'-bisphosphate nucleotidase 11q41DMG:Wockner_2014
GO_Annotation
3707ITPKBIP3-3KB | IP3K | IP3K-B | IP3KB | PIG37inositol-trisphosphate 3-kinase B1q42.13CV:PGCnp
DMG:Wockner_2014
Network
3775KCNK1DPK | HOHO | K2P1 | K2p1.1 | KCNO1 | TWIK-1 | TWIK1potassium two pore domain channel subfamily K member 11q42.2CV:PGCnp
DMG:Wockner_2014
Expression
183AGTANHU | SERPINA8angiotensinogen1q42.2CV:PGCnp
GO_Annotation
PMID:cooccur
7056THBDAHUS6 | BDCA3 | CD141 | THPH12 | THRM | TMthrombomodulin20p11.2CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
6616SNAP25CMS18 | RIC-4 | RIC4 | SEC9 | SNAP | SNAP-25 | bA416N4.2 | dJ1068F16.2synaptosome associated protein 25kDa20p12-p11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
Network
PMID:cooccur
CANABINOID
DOPAMINE
EXOCYTOSIS
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1114CHGBSCG1chromogranin B20p12.3Association
CV:PGCnp
GR_COR
GR_Ng
GR_WM
PMID:cooccur
146ADRA1DADRA1 | ADRA1A | ADRA1R | ALPHA1 | DAR | dJ779E11.2adrenoceptor alpha 1D20p13ADT:Sun_2012
CV:PGCnp
PMID:cooccur
140885SIRPABIT | CD172A | MFR | MYD-1 | P84 | PTPNS1 | SHPS1 | SIRPsignal regulatory protein alpha20p13CV:PGCnp
DMG:Wockner_2014
TYROSINE KINASE SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
5020OXTOT | OT-NPI | OXT-NPIoxytocin/neurophysin I prepropeptide20p13CV:PGCnp
PMID:cooccur
NEUROTROPHIN SIGNALING
Potential synaptic genes
551AVPADH | ARVP | AVP-NPII | AVRP | VParginine vasopressin20p13PMID:cooccurNEUROTROPHIN SIGNALING
3055HCKJTK9 | p59Hck | p61HckHCK proto-oncogene, Src family tyrosine kinase20q11-q12CV:PGCnp
Network
CompositeSet
2937GSSGSHS | HEL-S-64p | HEL-S-88nglutathione synthetase20q11.2Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
2691GHRHGHRF | GRF | INNgrowth hormone releasing hormone20q11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
598BCL2L1BCL-XL/S | BCL2L | BCLX | Bcl-X | PPP1R52BCL2 like 120q11.21GO_Annotation
Network
PMID:cooccur
3787KCNS1KV9.1potassium voltage-gated channel modifier subfamily S member 120q12CV:PGCnp
9935MAFBKRML | MCTOv-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B20q12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
655BMP7OP-1bone morphogenetic protein 720q13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
GO_Annotation
64405CDH22C20orf25 | dJ998H6.1cadherin 2220q13.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
4318MMP9CLG4B | GELB | MANDP2 | MMP-9matrix metallopeptidase 920q13.12CV:PGCnp
PMID:cooccur
57468SLC12A5EIEE34 | EIG14 | KCC2 | hKCC2solute carrier family 12 member 520q13.12CV:PGCnp
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
23394ADNPADNP1 | HVDAS | MRD28activity-dependent neuroprotector homeobox20q13.13CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
3745KCNB1DRK1 | EIEE26 | KV2.1 | h-DRK1potassium voltage-gated channel subfamily B member 120q13.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
1908EDN3ET-3 | ET3 | HSCR4 | PPET3 | WS4Bendothelin 320q13.2-q13.3CV:GWASdb
CV:PGCnp
GO_Annotation
4159MC3RBMIQ9 | MC3 | MC3-R | OB20 | OQTLmelanocortin 3 receptor20q13.2-q13.3CV:GWASdb
CV:PGCnp
PMID:cooccur
1917EEF1A2EEF1AL | EF-1-alpha-2 | EF1A | EIEE33 | HS1 | MRD38 | STN | STNLeukaryotic translation elongation factor 1 alpha 220q13.3CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
2778GNASAHO | C20orf45 | GNAS1 | GPSA | GSA | GSP | NESP | POH | SCG6 | SgVIGNAS complex locus20q13.3Association
CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
DOPAMINE
G-PROTEIN RELAY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
5105PCK1PEPCK-C | PEPCK1 | PEPCKCphosphoenolpyruvate carboxykinase 120q13.31CV:PGCnp
PMID:cooccur
55738ARFGAP1ARF1GAP | HRIHFB2281ADP ribosylation factor GTPase activating protein 120q13.33CV:PGCnpEXOCYTOSIS
26205GMEB2GMEB-2 | P79PIF | PIF79glucocorticoid modulatory element binding protein 220q13.33CV:PGCnpAscano FMRP targets
9885OSBPL2DFNA67 | DNFA67 | ORP-2 | ORP2oxysterol binding protein like 220q13.33CV:PGCnp
DMG:Wockner_2014
1137CHRNA4BFNC | EBN | EBN1 | NACHR | NACHRA4 | NACRA4cholinergic receptor nicotinic alpha 4 subunit20q13.33CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
10950BTG3ANA | TOB5 | TOB55 | TOFABTG family member 321q21.1CV:PGCnp
DMG:Jaffe_2016
3763KCNJ6BIR1 | GIRK-2 | GIRK2 | KATP-2 | KATP2 | KCNJ7 | KIR3.2 | KPLBS | hiGIRK2potassium voltage-gated channel subfamily J member 621q22.1CV:PGCnp
DMG:Jaffe_2016
Network
CANABINOID
EXCITABILITY
SEROTONIN
6647SOD1ALS | ALS1 | HEL-S-44 | IPOA | SOD | hSod1 | homodimersuperoxide dismutase 1, soluble21q22.11CV:PGCnp
GO_Annotation
PMID:cooccur
2897GRIK1EAA3 | EEA3 | GLR5 | GLUR5 | GluK1 | gluR-5glutamate ionotropic receptor kainate type subunit 121q22.11CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
Potential synaptic genes
3753KCNE1ISK | JLNS | JLNS2 | LQT2/5 | LQT5 | MinKpotassium voltage-gated channel subfamily E regulatory subunit 121q22.12CV:PGCnp
PMID:cooccur
EXCITABILITY
1859DYRK1ADYRK | DYRK1 | HP86 | MNB | MNBH | MRD7dual specificity tyrosine phosphorylation regulated kinase 1A21q22.13CV:PGCnp
GO_Annotation
7033TFF3ITF | P1B | TFItrefoil factor 321q22.3CV:PGCnp
PMID:cooccur
6285S100BNEF | S100 | S100-B | S100betaS100 calcium binding protein B21q22.3Association
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
875CBSHIP4cystathionine-beta-synthase21q22.3CV:PGCnp
PMID:cooccur
2953GSTT2-glutathione S-transferase theta 2 (gene/pseudogene)22q11.23CV:PGCnp
Expression
GSMA_I
PMID:cooccur
1415CRYBB2CCA2 | CRYB2 | CRYB2A | CTRCT3 | D22S665crystallin beta B222q11.23CV:PGCnp
GSMA_I
PMID:cooccur
1417CRYBB3CATCN2 | CRYB3 | CTRCT22crystallin beta B322q11.23CV:PGCnp
GSMA_I
23523CABIN1CAIN | KB-318B8.7 | PPP3INcalcineurin binding protein 122q11.23CV:PGCnp
DNM:Fromer_2014
GSMA_I
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
4282MIFGIF | GLIF | MMIFmacrophage migration inhibitory factor (glycosylation-inhibiting factor)22q11.23DNM:Fromer_2014
GSMA_I
PMID:cooccur
NEUROTROPHIN SIGNALING
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
1414CRYBB1CATCN3 | CTRCT17crystallin beta B122q12.1CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
23761PISDDJ858B16 | PSD | PSDC | PSSC | dJ858B16.2phosphatidylserine decarboxylase22q12.2CV:GWASdb
CV:PGCnp
DNM:Ambalavanan_2016
GSMA_I
3976LIFCDF | DIA | HILDA | MLPLIleukemia inhibitory factor22q12.2CV:PGCnp
GSMA_I
PMID:cooccur
4744NEFHNFHneurofilament, heavy polypeptide22q12.2CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
6523SLC5A1D22S675 | NAGT | SGLT1solute carrier family 5 member 122q12.3CV:PGCnp
GSMA_I
PMID:cooccur
1565CYP2D6CPD6 | CYP2D | CYP2D7AP | CYP2D7BP | CYP2D7P2 | CYP2D8P2 | CYP2DL1 | CYPIID6 | P450-DB1 | P450C2D | P450DB1cytochrome P450 family 2 subfamily D member 622q13.1ADT:Sun_2012
Association
CV:PGCnp
PMID:cooccur
3761KCNJ4HIR | HIRK2 | HRK1 | IRK-3 | IRK3 | Kir2.3potassium voltage-gated channel subfamily J member 422q13.1CV:PGCnp
PMID:cooccur
EXCITABILITY
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
6663SOX10DOM | PCWH | WS2E | WS4 | WS4CSRY-box 1022q13.1Association
DEG:Zhao_2015
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
7263TSTRDSthiosulfate sulfurtransferase22q13.1CV:PGCnp
PMID:cooccur
5155PDGFBIBGC5 | PDGF-2 | PDGF2 | SIS | SSV | c-sisplatelet derived growth factor subunit B22q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
8484GALR3-galanin receptor 322q13.1GO_Annotation
PMID:cooccur
3162HMOX1HMOX1D | HO-1 | HSP32 | bK286B10heme oxygenase 122q13.1CV:PGCnp
PMID:cooccur
9145SYNGR1-synaptogyrin 122q13.1Association
CV:PGCnp
GR_COR
GR_WM
PMID:cooccur
EXOCYTOSIS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5816PVALBD22S749parvalbumin22q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
1439CSF2RBCD131 | CDw131 | IL3RB | IL5RB | SMDP5colony stimulating factor 2 receptor beta common subunit22q13.1Association
CV:GWASdb
CV:PGCnp
GR_Ng
GR_WM
Network
PMID:cooccur
7008TEF-thyrotrophic embryonic factor22q13.2CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
1727CYB5R3B5R | DIA1cytochrome b5 reductase 322q13.2CV:PGCnp
DMG:Jaffe_2016
4700NDUFA6B14 | CI-B14 | LYRM6 | NADHB14NADH:ubiquinone oxidoreductase subunit A622q13.2CV:PGCnp
DMG:Jaffe_2016
5465PPARANR1C1 | PPAR | PPARalpha | hPPARperoxisome proliferator activated receptor alpha22q13.31CV:PGCnp
PMID:cooccur
23542MAPK8IP2IB-2 | IB2 | JIP2 | PRKM8IPLmitogen-activated protein kinase 8 interacting protein 222q13.33Association
CV:PGCnp
GO_Annotation
INTRACELLULAR SIGNAL TRANSDUCTION
6300MAPK12ERK-6 | ERK3 | ERK6 | MAPK 12 | P38GAMMA | PRKM12 | SAPK-3 | SAPK3mitogen-activated protein kinase 1222q13.33CV:PGCnp
DMG:Nishioka_2013
3625INHBB-inhibin beta B2cen-q13CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
9451EIF2AK3PEK | PERK | WRSeukaryotic translation initiation factor 2 alpha kinase 32p12CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
6869TACR1NK1R | NKIR | SPR | TAC1Rtachykinin receptor 12p12CV:PGCnp
PMID:cooccur
5967REG1AICRF | P19 | PSP | PSPS | PSPS1 | PTP | REGregenerating family member 1 alpha2p12CV:GWASdb
CV:PGCnp
925CD8ACD8 | Leu2 | MAL | p32CD8a molecule2p12CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
GSMA_I
1961EGR4NGFI-C | NGFIC | PAT133early growth response 42p13CV:PGCnp
Expression
PMID:cooccur
7841MOGSCDG2B | CWH41 | DER7 | GCS1mannosyl-oligosaccharide glucosidase2p13.1CV:PGCnp
DMG:Wockner_2014
6697SPRSDR38C1sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)2p14-p12CV:PGCnp
PMID:cooccur
2202EFEMP1DHRD | DRAD | FBLN3 | FBNL | FIBL-3 | MLVT | MTLV | S1-5EGF containing fibulin-like extracellular matrix protein 12p16CV:PGCnp
PMID:cooccur
23498HAAO3-HAO | HAO3-hydroxyanthranilate 3,4-dioxygenase2p21CV:PGCnp
PMID:cooccur
3973LHCGRHHG | LCGR | LGR2 | LH/CG-R | LH/CGR | LHR | LHRHR | LSH-R | ULG5luteinizing hormone/choriogonadotropin receptor2p21CV:PGCnp
130589GALMBLOCK25 | GLAT | HEL-S-63p | IBD1galactose mutarotase (aldose 1-epimerase)2p22.1CV:PGCnp
25797QPCTGCT | QC | sQCglutaminyl-peptide cyclotransferase2p22.2CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:Ripke_2013
LK:YES
PMID:cooccur
6801STRNSG2NAstriatin2p22.2CV:PGCnp
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
3777KCNK3K2p3.1 | OAT1 | PPH4 | TASK | TASK-1 | TBAK1potassium two pore domain channel subfamily K member 32p23CV:GWASdb
CV:PGCnp
GO_Annotation
3797KIF3C-kinesin family member 3C2p23CV:PGCnpCompositeSet
Darnell FMRP targets
2646GCKRFGQTL5 | GKRPglucokinase (hexokinase 4) regulator2p23CV:GWASdb
CV:PGCnp
3030HADHAECHA | GBP | HADH | LCEH | LCHAD | MTPA | TP-ALPHAhydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit2p23CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3795KHK-ketohexokinase2p23.3CV:PGCnp
7349UCNUI | UROCurocortin2p23.3DMG:Wockner_2014
GO_Annotation
PMID:cooccur
338APOBFLDB | LDLCQ4 | apoB-100 | apoB-48apolipoprotein B2p24-p23CV:PGCnp
PMID:cooccur
7447VSNL1HLP3 | HPCAL3 | HUVISL1 | VILIP | VILIP-1visinin like 12p24.3CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
7173TPOMSA | TDH2A | TPXthyroid peroxidase2p25CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
23040MYT1LMRD39 | NZF1 | ZC2HC4Bmyelin transcription factor 1 like2p25.3CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
80705TSGA10CEP4L | CT79testis specific 102q11.2CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
9486CHST10HNK-1ST | HNK1STcarbohydrate sulfotransferase 102q11.2CV:PGCnp
GSMA_I
PMID:cooccur
93082NEURL3LINCRneuralized E3 ubiquitin protein ligase 32q11.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
6549SLC9A2NHE2solute carrier family 9 member A22q11.2CV:PGCnp
GSMA_I
8808IL1RL2IL-1Rrp2 | IL-36R | IL1R-rp2 | IL1RRP2interleukin 1 receptor like 22q12CV:PGCnp
GSMA_I
3554IL1R1CD121A | D2S1473 | IL-1R-alpha | IL1R | IL1RA | P80interleukin 1 receptor type 12q12CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
Network
5624PROCAPC | PC | PROC1 | THPH3 | THPH4protein C, inactivator of coagulation factors Va and VIIIa2q13-q14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
3552IL1AIL-1A | IL1 | IL1-ALPHA | IL1F1interleukin 1 alpha2q14Association
CV:GWAScat
CV:GWASdb
GR_WM
GSMA_I
GSMA_IIA
PMID:cooccur
274BIN1AMPH2 | AMPHL | SH3P9bridging integrator 12q14CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_I
GSMA_IIA
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
3557IL1RNDIRA | ICIL-1RA | IL-1RN | IL-1ra | IL-1ra3 | IL1F3 | IL1RA | IRAP | MVCD4interleukin 1 receptor antagonist2q14.2Association
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
PMID:cooccur
3938LCTLAC | LPH | LPH1lactase2q21DNM:Xu_2012
GSMA_I
GSMA_IIA
PMID:cooccur
CompositeSet
7852CXCR4CD184 | D2S201E | FB22 | HM89 | HSY3RR | LAP-3 | LAP3 | LCR1 | LESTR | NPY3R | NPYR | NPYRL | NPYY3R | WHIM | WHIMSC-X-C motif chemokine receptor 42q21CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
6332SCN7ANaG | Nav2.1 | Nav2.2 | SCN6Asodium voltage-gated channel alpha subunit 72q21-q23CV:PGCnp
GSMA_IIA
PMID:cooccur
130074FAM168BMANIfamily with sequence similarity 168 member B2q21.1CV:PGCnp
8942KYNUKYNUUkynureninase2q22.2CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
92ACVR2AACTRII | ACVR2activin A receptor type 2A2q22.3CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
785CACNB4CAB4 | CACNLB4 | EA5 | EIG9 | EJM | EJM4 | EJM6calcium voltage-gated channel auxiliary subunit beta 42q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
CANABINOID
DOPAMINE
EXCITABILITY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
CompositeSet
6328SCN3ANAC3 | Nav1.3sodium voltage-gated channel alpha subunit 32q24CV:PGCnp
GSMA_IIA
EXCITABILITY
6335SCN9AETHA | FEB3B | GEFSP7 | HSAN2D | NE-NA | NENA | Nav1.7 | PN1 | SFNPsodium voltage-gated channel alpha subunit 92q24CV:PGCnp
GSMA_IIA
EXCITABILITY
11227GALNT5GALNAC-T5 | GALNACT5polypeptide N-acetylgalactosaminyltransferase 52q24.1CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
130399ACVR1CACVRLK7 | ALK7activin A receptor type 1C2q24.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
27347STK39DCHT | PASK | SPAKserine/threonine kinase 392q24.3CV:PGCnp
GSMA_IIA
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
1803DPP4ADABP | ADCP2 | CD26 | DPPIV | TP103dipeptidyl peptidase 42q24.3CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
GSMA_IIA
PMID:cooccur
6741SSBLARP3 | La | La/SSBSjogren syndrome antigen B2q31.1CV:PGCnp
PMID:cooccur
Ascano FMRP targets
3232HOXD3HOX1D | HOX4 | HOX4A | Hox-4.1homeobox D32q31.1CV:PGCnp
51454GULP1CED-6 | CED6 | GULPGULP, engulfment adaptor PTB domain containing 12q32.3-q33CV:PGCnp
PMID:cooccur
10152ABI2ABI-2 | ABI2B | AIP-1 | AblBP3 | SSH3BP2 | argBP1 | argBPIA | argBPIBabl-interactor 22q33CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
STRUCTURAL PLASTICITY
CompositeSet
2825GPR1-G protein-coupled receptor 12q33.3CV:PGCnp
GSMA_IIA
GSMA_IIE
PMID:cooccur
2066ERBB4ALS19 | HER4 | p180erbB4erb-b2 receptor tyrosine kinase 42q33.3-q34Association
Core
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
Potential synaptic genes
4133MAP2MAP2A | MAP2B | MAP2Cmicrotubule associated protein 22q34-q35CV:PGCnp
GR_Ng
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3485IGFBP2IBP2 | IGF-BP53insulin like growth factor binding protein 22q35CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
PMID:cooccur
3577CXCR1C-C | C-C-CKR-1 | CD128 | CD181 | CDw128a | CKR-1 | CMKAR1 | IL8R1 | IL8RA | IL8RBAC-X-C motif chemokine receptor 12q35CV:PGCnp
DMG:Wockner_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
3579CXCR2CD182 | CDw128b | CMKAR2 | IL8R2 | IL8RA | IL8RBC-X-C motif chemokine receptor 22q35CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
84812PLCD4-phospholipase C delta 42q35CV:PGCnp
DNM:McCarthy_2014
GSMA_IIA
GSMA_IIE
6508SLC4A3AE3 | SLC2Csolute carrier family 4 member 32q36CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
54578UGT1A6GNT1 | HLUGP | HLUGP1 | UDPGT | UDPGT 1-6 | UGT1 | UGT1A6S | UGT1FUDP glucuronosyltransferase family 1 member A62q37CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
4759NEU2SIAL2neuraminidase 2 (cytosolic sialidase)2q37CV:GWAScat
CV:PGCnp
6694SPP2SPP-24 | SPP24secreted phosphoprotein 22q37.1CV:GWASdb
CV:PGCnp
55230USP40-ubiquitin specific peptidase 402q37.1CV:PGCnp
DMG:Wockner_2014
4880NPPCCNP | CNP2natriuretic peptide C2q37.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
248ALPIIAPalkaline phosphatase, intestinal2q37.1CV:PGCnp
5449POU1F1CPHD1 | GHF-1 | PIT1 | POU1F1a | Pit-1POU class 1 homeobox 13p11CV:PGCnp
GSMA_IIA
GSMA_IIE
776CACNA1DCACH3 | CACN4 | CACNL1A2 | CCHL1A2 | Cav1.3 | PASNA | SANDDcalcium voltage-gated channel subunit alpha1 D3p14.3CV:PGCnp
PMID:cooccur
EXCITABILITY
SEROTONIN
CompositeSet
Potential synaptic genes
993CDC25ACDC25A2cell division cycle 25A3p21CV:PGCnpAscano FMRP targets
10201NME6IPIA-ALPHA | NDK 6 | NM23-H6NME/NM23 nucleoside diphosphate kinase 63p21CV:PGCnp
1849DUSP7MKPX | PYST2dual specificity phosphatase 73p21CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
1230CCR1CD191 | CKR-1 | CKR1 | CMKBR1 | HM145 | MIP1aR | SCYAR1C-C motif chemokine receptor 13p21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
25981DNAH1DNAHC1 | HDHC7 | HL-11 | HL11 | HSRF-1 | XLHSRF-1dynein axonemal heavy chain 13p21.1CV:PGCnp
DNM:Fromer_2014
LK:YES
CompositeSet
2876GPX1GPXD | GSHPX1glutathione peroxidase 13p21.3CV:PGCnp
PMID:cooccur
10675CSPG5NGCchondroitin sulfate proteoglycan 53p21.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
7867MAPKAPK33PK | MAPKAP-K3 | MAPKAP3 | MAPKAPK-3 | MK-3mitogen-activated protein kinase-activated protein kinase 33p21.3CV:PGCnp
DMG:Jaffe_2016
8692HYAL2LUCA2hyaluronoglucosaminidase 23p21.3CV:PGCnp
79012CAMKV1G5 | VACAMKLCaM kinase-like vesicle-associated3p21.31CV:PGCnpG2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
729230CCR2CC-CKR-2 | CCR-2 | CCR2A | CCR2B | CD192 | CKR2 | CKR2A | CKR2B | CMKBR2 | MCP-1-RC-C motif chemokine receptor 23p21.31CV:PGCnp
PMID:cooccur
8927BSNZNF231bassoon presynaptic cytomatrix protein3p21.31CV:PGCnp
DMG:Wockner_2014
DNM:Awadalla_2010
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
93ACVR2BACTRIIB | ActR-IIB | HTX4activin A receptor type 2B3p22CV:PGCnp
GSMA_I
7048TGFBR2AAT3 | FAA3 | LDS1B | LDS2 | LDS2B | MFS2 | RIIC | TAAD2 | TGFR-2 | TGFbeta-RIItransforming growth factor beta receptor II3p22CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
4336MOBP-myelin-associated oligodendrocyte basic protein3p22.1CV:PGCnp
Expression
GO_Annotation
PMID:cooccur
885CCK-cholecystokinin3p22.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
NEUROTROPHIN SIGNALING
5915RARBHAP | MCOPS12 | NR1B2 | RRB2retinoic acid receptor beta3p24.2CV:GWASdb
CV:PGCnp
GSMA_I
131096KCNH8ELK | ELK1 | Kv12.1 | elk3potassium voltage-gated channel subfamily H member 83p24.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
GSMA_I
5894RAF1CMD1NN | CRAF | NS5 | Raf-1 | c-RafRaf-1 proto-oncogene, serine/threonine kinase3p25CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
Network
CANABINOID
DOPAMINE
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.humanNRC
G2Cdb.humanPSP
Ascano FMRP targets
6854SYN2SYNIIsynapsin II3p25Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
CANABINOID
DOPAMINE
EXOCYTOSIS
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
5021OXTROT-Roxytocin receptor3p25CV:PGCnp
Expression
PMID:cooccur
Potential synaptic genes
23609MKRN2HSPC070 | RNF62makorin ring finger protein 23p25CV:PGCnp
GSMA_I
491ATP2B2PMCA2 | PMCA2a | PMCA2iATPase plasma membrane Ca2+ transporting 23p25.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
6538SLC6A11GAT-3 | GAT3 | GAT4solute carrier family 6 member 113p25.3CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
3708ITPR1ACV | CLA4 | INSP3R1 | IP3R | IP3R1 | PPP1R94 | SCA15 | SCA16 | SCA29inositol 1,4,5-trisphosphate receptor type 13p26.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_mGluR5
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
200959GABRR3-gamma-aminobutyric acid type A receptor rho3 subunit (gene/pseudogene)3q11.2CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
214ALCAMCD166 | MEMDactivated leukocyte cell adhesion molecule3q13.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
CompositeSet
2932GSK3B-glycogen synthase kinase 3 beta3q13.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_WM
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1814DRD3D3DR | ETM1 | FET1dopamine receptor D33q13.3ADT:Sun_2012
Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
7200TRHPro-TRH | TRFthyrotropin releasing hormone3q13.3-q21CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
4045LSAMPIGLON3 | LAMPlimbic system-associated membrane protein3q13.31CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
8607RUVBL1ECP-54 | ECP54 | INO80H | NMP 238 | NMP238 | PONTIN | Pontin52 | RVB1 | TIH1 | TIP49 | TIP49ARuvB like AAA ATPase 13q21CV:PGCnp
5096PCCB-propionyl-CoA carboxylase beta subunit3q21-q22CV:PGCnp
DMG:Jaffe_2016
56667MUC13DRCC1 | MUC-13mucin 13, cell surface associated3q21.2CV:PGCnp
8997KALRNARHGEF24 | CHD5 | CHDS5 | DUET | DUO | HAPIP | TRADkalirin, RhoGEF kinase3q21.2CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
G2Cdb.human_PocklingtonH1
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
84303CHCHD6CHCM1 | Mic25 | PPP1R23coiled-coil-helix-coiled-coil-helix domain containing 63q21.3CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
CompositeSet
7018TFHEL-S-71p | PRO1557 | PRO2086 | TFQTL1transferrin3q22.1Association
CV:PGCnp
CV:PheWAS
Network
PMID:cooccur
6010RHOCSNBAD1 | OPN2 | RP4rhodopsin3q22.1CV:PGCnp
PMID:cooccur
22808MRASM-RAs | R-RAS3 | RRAS3muscle RAS oncogene homolog3q22.3CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
1359CPA3MC-CPAcarboxypeptidase A33q24CV:PGCnp
1360CPB1CPB | PASP | PCPBcarboxypeptidase B13q24CV:PGCnp
170506DHX36DDX36 | G4R1 | MLEL1 | RHAUDEAH-box helicase 363q25.2CV:PGCnp
6476SI-sucrase-isomaltase (alpha-glucosidase)3q25.2-q26.2CV:PGCnp
PMID:cooccur
6474SHOX2OG12 | OG12X | SHOTshort stature homeobox 23q25.32CV:PGCnp
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet
22871NLGN1NL1neuroligin 13q26.31CV:GWASdb
CV:PGCnp
CV:PheWAS
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
2693GHSRGHDPgrowth hormone secretagogue receptor3q26.31CV:PGCnp
GO_Annotation
PMID:cooccur
5648MASP13MC1 | CRARF | CRARF1 | MAP1 | MASP | MASP3 | MAp44 | PRSS5 | RaRFmannan binding lectin serine peptidase 13q27-q28CV:GWASdb
CV:PGCnp
GO_Annotation
5437POLR2HRPABC3 | RPB17 | RPB8polymerase (RNA) II subunit H3q28DMG:Jaffe_2016
6750SSTSMSTsomatostatin3q28CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
NEUROTROPHIN SIGNALING
3280HES1HES-1 | HHL | HRY | bHLHb39hes family bHLH transcription factor 13q28-q29CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GO_Annotation
PMID:cooccur
1739DLG1DLGH1 | SAP-97 | SAP97 | dJ1061C18.1.1 | hdlgdiscs large homolog 1, scribble cell polarity complex component3q29CNV:YES
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
Network
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
7345UCHL1HEL-117 | HEL-S-53 | NDGOA | PARK5 | PGP 9.5 | PGP9.5 | PGP95 | Uch-L1ubiquitin C-terminal hydrolase L14p14CV:PGCnp
GO_Annotation
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
886CCKARCCK-A | CCK1-R | CCK1R | CCKRAcholecystokinin A receptor4p15.2Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
8310ACOX3-acyl-CoA oxidase 3, pristanoyl4p15.3CV:PGCnp
DMG:Nishioka_2013
5156PDGFRACD140A | GAS9 | PDGFR-2 | PDGFR2 | RHEPDGFRAplatelet derived growth factor receptor alpha4q12CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
3815KITC-Kit | CD117 | PBT | SCFRKIT proto-oncogene receptor tyrosine kinase4q12CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
10874NMU-neuromedin U4q12CV:PGCnp
DMG:Wockner_2014
GO_Annotation
7366UGT2B15HLUG4 | UDPGT 2B8 | UDPGT2B15 | UDPGTH3 | UGT2B8UDP glucuronosyltransferase family 2 member B154q13DMG:Wockner_2014
2250FGF5HBGF-5 | Smag-82 | TCMGLYfibroblast growth factor 54q21CV:PGCnp
GO_Annotation
6622SNCANACP | PARK1 | PARK4 | PD1synuclein alpha4q21CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
950SCARB2AMRF | CD36L2 | EPM4 | HLGP85 | LGP85 | LIMP-2 | LIMPII | SR-BIIscavenger receptor class B member 24q21.1CV:PGCnp
DMG:Wockner_2014
2798GNRHRGNRHR1 | GRHR | HH7 | LHRHR | LRHRgonadotropin releasing hormone receptor4q21.2CV:PGCnp
22915MMRN1ECM | EMILIN4 | GPIa* | MMRNmultimerin 14q22CV:PGCnp
79982DNAJB14EGNR9427 | PRO34683DnaJ heat shock protein family (Hsp40) member B144q23CV:PGCnp
Expression
126ADH1CADH3alcohol dehydrogenase 1C (class I), gamma polypeptide4q23CV:PGCnp
PMID:cooccur
131ADH7ADH4alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide4q23-q24CV:PGCnp
PMID:cooccur
839CASP6MCH2caspase 64q25CV:PGCnp
Network
Ascano FMRP targets
27068PPA2HSPC124 | SID6-306pyrophosphatase (inorganic) 24q25CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
2243FGAFib2fibrinogen alpha chain4q28CV:PGCnp
GO_Annotation
PMID:cooccur
4543MTNR1AMEL-1A-R | MT1melatonin receptor 1A4q35.1CV:PGCnp
Network
PMID:cooccur
3660IRF2IRF-2interferon regulatory factor 24q35.1CV:PGCnp
DMG:Jaffe_2016
64902AGXT2AGT2 | DAIBATalanine--glyoxylate aminotransferase 25p13CV:PGCnp
PMID:cooccur
5734PTGER4EP4 | EP4Rprostaglandin E receptor 45p13.1CV:GWASdb
CV:PGCnp
PMID:cooccur
5618PRLRHPRL | MFAB | hPRLrIprolactin receptor5p13.2CV:PGCnp
PMID:cooccur
6715SRD5A1S5AR 1steroid 5 alpha-reductase 15p15CV:PGCnp
PMID:cooccur
1501CTNND2GT24 | NPRAPcatenin delta 25p15.2CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
5144PDE4DACRDYS2 | DPDE3 | HSPDE4D | PDE43 | PDE4DN2 | STRK1phosphodiesterase 4D5q12CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:PheWAS
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
3350HTR1A5-HT-1A | 5-HT1A | 5HT1a | ADRB2RL1 | ADRBRL1 | G-21 | PFMCD5-hydroxytryptamine receptor 1A5q12.3ADT:Sun_2012
Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
GPCR SIGNALLING
SEROTONIN
4131MAP1BFUTSCH | MAP5 | PPP1R102microtubule associated protein 1B5q13CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
7060THBS4TSP-4 | TSP4thrombospondin 45q13CV:PGCnp
PMID:cooccur
115827RAB3C-RAB3C, member RAS oncogene family5q13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
INTRACELLULAR TRAFFICKING
134285TMEM171PRP2transmembrane protein 1715q13.2CV:PGCnp
9607CARTPTCARTCART prepropeptide5q13.2CV:PGCnp
GO_Annotation
PMID:cooccur
1393CRHBPCRF-BP | CRFBPcorticotropin releasing hormone binding protein5q13.3CV:PGCnp
PMID:cooccur
NEUROTROPHIN SIGNALING
635BHMTBHMT1 | HEL-S-61pbetaine--homocysteine S-methyltransferase5q14.1CV:PGCnp
PMID:cooccur
9456HOMER1HOMER | HOMER1A | HOMER1B | HOMER1C | SYN47 | Ves-1homer scaffolding protein 15q14.2CV:PGCnp
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
1946EFNA5AF1 | EFL5 | EPLG7 | GLC1M | LERK7 | RAGSephrin-A55q21CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
324APCBTPS2 | DP2 | DP2.5 | DP3 | GS | PPP1R46adenomatous polyposis coli5q21-q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
814CAMK4CaMK IV | CaMK-GR | IV | caMKcalcium/calmodulin-dependent protein kinase IV5q21.3CV:PGCnp
DNM:Xu_2012
GO_Annotation
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
CompositeSet
4762NEUROG1AKA | Math4C | NEUROD3 | bHLHa6 | ngn1neurogenin 15q23-q31Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
1036CDO1-cysteine dioxygenase type 15q23.2CV:PGCnp
DMG:Jaffe_2016
6414SEPP1SELP | SEPP | SePselenoprotein P, plasma, 15q31CV:PGCnp
GO_Annotation
PMID:cooccur
9547CXCL14BMAC | BRAK | KEC | KS1 | MIP-2g | MIP2G | NJAC | SCYB14C-X-C motif chemokine ligand 145q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
154ADRB2ADRB2R | ADRBR | B2AR | BAR | BETA2ARadrenoceptor beta 25q31-q32CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
GPCR SIGNALLING
3360HTR45-HT4 | 5-HT4R5-hydroxytryptamine receptor 45q31-q33ADT:Sun_2012
Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
1958EGR1AT225 | G0S30 | KROX-24 | NGFI-A | TIS8 | ZIF-268 | ZNF225early growth response 15q31.1CV:PGCnp
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
2890GRIA1GLUH1 | GLUR1 | GLURA | GluA1 | HBGR1glutamate ionotropic receptor AMPA type subunit 15q31.1Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanARC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
3578IL9HP40 | IL-9 | P40interleukin 95q31.1CV:PGCnp
GSMA_I
PMID:cooccur
3313HSPA9CRP40 | CSA | EVPLS | GRP-75 | GRP75 | HEL-S-124m | HSPA9B | MOT | MOT2 | MTHSP75 | PBP74 | SAANheat shock protein family A (Hsp70) member 95q31.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
2908NR3C1GCCR | GCR | GCRST | GR | GRLnuclear receptor subfamily 3 group C member 15q31.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
6949TCOF1MFD1 | TCS | TCS1 | treacletreacle ribosome biogenesis factor 15q32CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
972CD74DHLAG | HLADG | II | Ia-GAMMACD74 molecule5q32CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
815CAMK2ACAMKAcalcium/calmodulin-dependent protein kinase II alpha5q32CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
2741GLRA1HKPX1 | STHEglycine receptor alpha 15q32CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
9421HAND1Hxt | Thing1 | bHLHa27 | eHandheart and neural crest derivatives expressed 15q33CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
GSMA_IIE
11346SYNPO-synaptopodin5q33.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
CompositeSet
Darnell FMRP targets
Potential synaptic genes
2196FAT2CDHF8 | CDHR9 | HFAT2 | MEGF1FAT atypical cadherin 25q33.1CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
CompositeSet
Darnell FMRP targets
3593IL12BCLMF | CLMF2 | IL-12B | IMD28 | IMD29 | NKSF | NKSF2interleukin 12B5q33.3Association
CV:PGCnp
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
2172FABP6I-15P | I-BABP | I-BALB | I-BAP | ILBP | ILBP3 | ILLBPfatty acid binding protein 65q33.3-q34CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
2559GABRA6-gamma-aminobutyric acid type A receptor alpha6 subunit5q34Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
LIGAND GATED ION SIGNALING
2566GABRG2CAE2 | ECA2 | GEFSP3gamma-aminobutyric acid type A receptor gamma2 subunit5q34Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
LIGAND GATED ION SIGNALING
1812DRD1DADR | DRD1Adopamine receptor D15q35.1ADT:Sun_2012
Core
CV:PGCnp
GO_Annotation
GR_Ng
GSMA_IIA
Network
PMID:cooccur
DOPAMINE
GPCR SIGNALLING
Potential synaptic genes
4488MSX2CRS2 | FPP | HOX8 | MSH | PFM | PFM1msh homeobox 25q35.2CV:PGCnp
GSMA_IIA
PMID:cooccur
10814CPLX2921-L | CPX-2 | CPX2 | Hfb1complexin 25q35.2Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_Ng
GSMA_IIA
PMID:cooccur
EXOCYTOSIS
CompositeSet
Darnell FMRP targets
27232GNMTHEL-S-182mPglycine N-methyltransferase6p12GSMA_I
GSMA_IIE
PMID:cooccur
5558PRIM2PRIM2A | p58primase (DNA) subunit 26p12-p11.1CV:GWASdb
CV:PGCnp
8521GCM1GCMA | hGCMaglial cells missing homolog 16p12.1CV:PGCnp
GO_Annotation
GSMA_IIE
PMID:cooccur
3159HMGA1HMG-R | HMGA1A | HMGIYhigh mobility group AT-hook 16p21CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIE
6499SKIV2L170A | DDX13 | HLP | SKI2 | SKI2W | SKIV2 | SKIV2L1 | THES2Ski2 like RNA helicase6p21CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GSMA_I
2740GLP1R-glucagon like peptide 1 receptor6p21CV:PGCnp
GSMA_I
GSMA_IIE
Network
PMID:cooccur
896CCND3-cyclin D36p21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIE
Network
27242TNFRSF21BM-018 | CD358 | DR6tumor necrosis factor receptor superfamily member 216p21.1CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
10864SLC22A7NLT | OAT2solute carrier family 22 member 76p21.1CV:PGCnp
Expression
GSMA_IIE
5467PPARDFAAR | NR1C2 | NUC1 | NUCI | NUCII | PPARBperoxisome proliferator activated receptor delta6p21.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIE
PMID:cooccur
1026CDKN1ACAP20 | CDKN1 | CIP1 | MDA-6 | P21 | SDI1 | WAF1 | p21CIP1cyclin-dependent kinase inhibitor 1A6p21.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIE
Network
PMID:cooccur
5292PIM1PIMPim-1 proto-oncogene, serine/threonine kinase6p21.2CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
GSMA_I
GSMA_IIE
629CFBAHUS4 | ARMD14 | BF | BFD | CFAB | CFBD | FB | FBI12 | GBG | H2-Bf | PBF2complement factor B6p21.3Association
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
3108HLA-DMAD6S222E | DMA | HLADM | RING6major histocompatibility complex, class II, DM alpha6p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
3112HLA-DOBDOBmajor histocompatibility complex, class II, DO beta6p21.3CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
3117HLA-DQA1CD | CELIAC1 | DQ-A1 | GSE | HLA-DQAmajor histocompatibility complex, class II, DQ alpha 16p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
3133HLA-EEA1.2 | EA2.1 | HLA-6.2 | MHC | QA1major histocompatibility complex, class I, E6p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3134HLA-FCDA12 | HLA-5.4 | HLA-CDA12 | HLAFmajor histocompatibility complex, class I, F6p21.3CV:PGCnp
GSMA_I
PMID:cooccur
8831SYNGAP1MRD5 | RASA1 | RASA5 | SYNGAPsynaptic Ras GTPase activating protein 16p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
GSMA_I
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
8870IER3DIF-2 | DIF2 | GLY96 | IEX-1 | IEX-1L | IEX1 | PRG1immediate early response 36p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
780DDR1CAK | CD167 | DDR | EDDR1 | HGK2 | MCK10 | NEP | NTRK4 | PTK3 | PTK3A | RTK6 | TRKEdiscoidin domain receptor tyrosine kinase 16p21.3Association
CV:PGCnp
DMG:Montano_2016
Expression
GO_Annotation
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
177AGERRAGEadvanced glycosylation end product-specific receptor6p21.3CV:PGCnp
GSMA_I
G2Cdb.humanPSD
G2Cdb.humanPSP
7124TNFDIF | TNF-alpha | TNFA | TNFSF2 | TNLG1Ftumor necrosis factor6p21.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
10211FLOT1-flotillin 16p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6257RXRBDAUDI6 | H-2RIIBP | NR2B2 | RCoR-1retinoid X receptor beta6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
3010HIST1H1TH1.6 | H1FT | H1t | dJ221C16.2histone cluster 1, H1t6p21.3CV:GWASdb
CV:PGCnp
GSMA_I
7917BAG6BAG-6 | BAT3 | D6S52E | G3BCL2 associated athanogene 66p21.3CV:PGCnp
Expression
GSMA_I
Network
6890TAP1ABC17 | ABCB2 | APT1 | D6S114E | PSF-1 | PSF1 | RING4 | TAP1*0102N | TAP1Ntransporter 1, ATP-binding cassette, sub-family B (MDR/TAP)6p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
PMID:cooccur
6891TAP2ABC18 | ABCB3 | APT2 | D6S217E | PSF-2 | PSF2 | RING11transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)6p21.3CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
9374PPT2C6orf8 | G14 | PPT-2palmitoyl-protein thioesterase 26p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GSMA_I
4049LTALT | TNFB | TNFSF1 | TNLG1Elymphotoxin alpha6p21.3Association
CV:PGCnp
GR_WM
GSMA_I
PMID:cooccur
5696PSMB8ALDD | D6S216 | D6S216E | JMP | LMP7 | NKJO | PSMB5i | RING10proteasome subunit beta 86p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GSMA_I
1432MAPK14CSBP | CSBP1 | CSBP2 | CSPB1 | EXIP | Mxi2 | PRKM14 | PRKM15 | RK | SAPK2A | p38 | p38ALPHAmitogen-activated protein kinase 146p21.3-p21.2CV:PGCnp
GSMA_I
GSMA_IIE
Network
PMID:cooccur
2550GABBR1GABABR1 | GABBR1-3 | GB1 | GPRC3Agamma-aminobutyric acid type B receptor subunit 16p21.31Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_I
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
1208CLPS-colipase6p21.31CV:PGCnp
GSMA_I
GSMA_IIE
PMID:cooccur
2880GPX5HEL-S-75pglutathione peroxidase 56p22.1CV:PGCnp
GSMA_I
257202GPX6GPX5p | GPXP3 | GPx-6 | GSHPx-6 | dJ1186N24 | dJ1186N24.1glutathione peroxidase 66p22.1CV:PGCnp
GSMA_I
221662RBM24RNPC6 | dJ259A10.1RNA binding motif protein 246p22.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
5617PRLGHA1prolactin6p22.3CV:PGCnp
GSMA_I
PMID:cooccur
2766GMPRGMPR 1 | GMPR1guanosine monophosphate reductase6p23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
PMID:cooccur
6310ATXN1ATX1 | D6S504E | SCA1ataxin 16p23Association
CV:GWASdb
CV:PGCnp
Network
CompositeSet
Darnell FMRP targets
4117MAKRP62male germ cell associated kinase6p24CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
83732RIOK1AD034 | RRP10 | bA288G3.1RIO kinase 16p24.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
22999RIMS1CORD7 | RAB3IP2 | RIM | RIM1regulating synaptic membrane exocytosis 16q12-q13CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CANABINOID
DOPAMINE
EXOCYTOSIS
SEROTONIN
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
5238PGM3AGM1 | IMD23 | PAGM | PGM 3phosphoglucomutase 36q14.1-q15CV:PGCnp
9892SNAP91AP180 | CALMsynaptosome associated protein 91kDa6q14.2CV:PGC128
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
ENDOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
1081CGACG-ALPHA | FSHA | GPHA1 | GPHa | HCG | LHA | TSHAglycoprotein hormones, alpha polypeptide6q14.3CV:PGCnp
PMID:cooccur
2570GABRR2-gamma-aminobutyric acid type A receptor rho2 subunit6q15CV:PGCnp
GO_Annotation
PMID:cooccur
5454POU3F2BRN2 | N-Oct3 | OCT7 | OTF-7 | OTF7 | POUF3 | brn-2 | oct-7POU class 3 homeobox 26q16CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
4082MARCKS80K-L | MACS | PKCSL | PRKCSLmyristoylated alanine rich protein kinase C substrate6q22.2CV:PGCnp
Network
PMID:cooccur
CANABINOID
DOPAMINE
INTRACELLULAR SIGNAL TRANSDUCTION
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
Potential synaptic genes
5570PKIBPRKACN2protein kinase (cAMP-dependent, catalytic) inhibitor beta6q22.31CV:PGCnp
DMG:Wockner_2014
3097HIVEP2HIV-EP2 | MBP-2 | MIBP1 | SHN2 | ZAS2 | ZNF40Bhuman immunodeficiency virus type I enhancer binding protein 26q23-q24CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
8417STX7-syntaxin 76q23.1CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
2911GRM1GPRC1A | MGLU1 | MGLUR1 | PPP1R85 | SCAR13glutamate receptor, metabotropic 16q24CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
GPCR SIGNALLING
METABOTROPIC GLUTAMATE RECEPTOR
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
9590AKAP12AKAP250 | SSeCKSA-kinase anchoring protein 126q24-q25CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
Expression
4988OPRM1LMOR | M-OR-1 | MOP | MOR | MOR1 | OPRMopioid receptor, mu 16q24-q25ADT:Sun_2012
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
GPCR SIGNALLING
5325PLAGL1LOT1 | ZAC | ZAC1PLAG1 like zinc finger 16q24-q25CV:PGCnp
DMG:Wockner_2014
54516MTRF1LHMRF1L | MRF1L | mtRF1amitochondrial translational release factor 1 like6q25-q26CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
6950TCP1CCT-alpha | CCT1 | CCTa | D6S230E | TCP-1-alphat-complex 16q25.3-q26Association
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3482IGF2RCD222 | CI-M6PR | CIMPR | M6P-R | M6P/IGF2R | MPR 300 | MPR1 | MPR300 | MPRIinsulin like growth factor 2 receptor6q26CV:PGCnp
DMG:Montano_2016
PMID:cooccur
Ascano FMRP targets
5340PLG-plasminogen6q26CV:PGCnp
GO_Annotation
Network
PMID:cooccur
5260PHKG1PHKGphosphorylase kinase, gamma 1 (muscle)7p11.2CV:PGCnp
1956EGFRERBB | ERBB1 | HER1 | NISBD2 | PIG61 | mENAepidermal growth factor receptor7p12Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
10371SEMA3ACOLL1 | HH16 | Hsema-I | Hsema-III | SEMA1 | SEMAD | SEMAIII | SEMAL | SemD | coll-1semaphorin 3A7p12.1CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
1644DDCAADCdopa decarboxylase7p12.2CV:PGCnp
PMID:cooccur
DOPAMINE
SEROTONIN
3486IGFBP3BP-53 | IBP3insulin like growth factor binding protein 37p12.3CV:PGCnp
PMID:cooccur
5478PPIACYPA | CYPH | HEL-S-69ppeptidylprolyl isomerase A7p13CV:PGCnp
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
117ADCYAP1R1PAC1 | PAC1R | PACAPR | PACAPRIADCYAP receptor type I7p14CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
816CAMK2BCAM2 | CAMK2 | CAMKBcalcium/calmodulin-dependent protein kinase II beta7p14.3-p14.1CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_PocklingtonH1
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
3181HNRNPA2B1HNRNPA2 | HNRNPB1 | HNRPA2 | HNRPA2B1 | HNRPB1 | IBMPFD2 | RNPA2 | SNRPB1heterogeneous nuclear ribonucleoprotein A2/B17p15CV:PGCnp
196AHRbHLHe76aryl hydrocarbon receptor7p15CV:PGCnp
PMID:cooccur
10652YKT6-YKT6 v-SNARE homolog (S. cerevisiae)7p15.1CV:PGCnp
GO_Annotation
4852NPYPYY4neuropeptide Y7p15.1Association
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
NEUROTROPHIN SIGNALING
729920ISPDMDDGA7 | MDDGC7 | Nip | hCG_1745121isoprenoid synthase domain containing7p21.2CV:PGCnp
DMG:Wockner_2014
340260UNCXUNCX4.1UNC homeobox7p22.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
GO_Annotation
435ASLASALargininosuccinate lyase7q11.21CV:PGCnp
PMID:cooccur
1365CLDN3C7orf1 | CPE-R2 | CPETR2 | HRVP1 | RVP1claudin 37q11.23CNV:YES
CV:PGCnp
GO_Annotation
6804STX1AHPC-1 | P35-1 | STX1 | SYN1Asyntaxin 1A7q11.23Association
CNV:YES
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
EXOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
3315HSPB1CMT2F | HEL-S-102 | HMN2B | HS.76067 | HSP27 | HSP28 | Hsp25 | SRP27heat shock protein family B (small) member 17q11.23CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
3984LIMK1LIMK | LIMK-1LIM domain kinase 17q11.23CNV:YES
CV:PGCnp
DEG:Zhao_2015
GO_Annotation
Network
PMID:cooccur
6863TAC1Hs.2563 | NK2 | NKNA | NPK | TAC2tachykinin precursor 17q21-q22CV:PGCnp
GO_Annotation
PMID:cooccur
2913GRM3GLUR3 | GPRC1C | MGLUR3 | mGlu3glutamate receptor, metabotropic 37q21.1-q21.2Association
Core
CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
GPCR SIGNALLING
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
4951OCM2OCMoncomodulin 27q21.2CV:PGCnp
5444PON1ESA | MVCD5 | PONparaoxonase 17q21.3CV:PGCnp
PMID:cooccur
55607PPP1R9ANRB1 | NRBI | Neurabin-Iprotein phosphatase 1 regulatory subunit 9A7q21.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
4885NPTX2NARP | NP-II | NP2neuronal pentraxin 27q21.3-q22.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
Potential synaptic genes
43ACHEACEE | ARACHE | N-ACHE | YTacetylcholinesterase (Yt blood group)7q22CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
2056EPOEP | MVCD2erythropoietin7q22CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
1749DLX5SHFM1Ddistal-less homeobox 57q22CV:PGCnp
GO_Annotation
PMID:cooccur
55262C7orf43-chromosome 7 open reading frame 437q22.1DEG:Maycox_2009
3751KCND2KV4.2 | RK5potassium voltage-gated channel subfamily D member 27q31CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
EXCITABILITY
CompositeSet
Darnell FMRP targets
4897NRCAM-neuronal cell adhesion molecule7q31CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
1080CFTRABC35 | ABCC7 | CF | CFTR/MRP | MRP7 | TNR-CFTR | dJ760C5.1cystic fibrosis transmembrane conductance regulator7q31.2CV:PGCnp
Expression
Network
PMID:cooccur
3952LEPLEPD | OB | OBSleptin7q31.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
2918GRM8GLUR8 | GPRC1H | MGLUR8 | mGlu8glutamate receptor, metabotropic 87q31.3-q32.1Association
CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
Potential synaptic genes
6561SLC13A1NAS1 | NaSi-1solute carrier family 13 member 17q31.32CV:PGCnp
DNM:Fromer_2014
DNM:McCarthy_2014
CompositeSet
4698NDUFA5B13 | CI-13KD-B | CI-13kB | NUFM | UQOR13NADH:ubiquinone oxidoreductase subunit A57q31.33CV:PGCnp
DMG:Nishioka_2013
5078PAX4KPD | MODY9paired box 47q32CV:PGCnp
5304PIPGCDFP-15 | GCDFP15 | GPIP4prolactin-induced protein7q34CV:PGCnp
PMID:cooccur
835CASP2CASP-2 | ICH1 | NEDD-2 | NEDD2 | PPP1R57caspase 27q34-q35CV:PGCnp
6916TBXAS1BDPLT14 | CYP5 | CYP5A1 | GHOSAL | THAS | TS | TXAS | TXSthromboxane A synthase 17q34-q35CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
1180CLCN1CLC1chloride voltage-gated channel 17q35CV:PGCnp
DNM:Fromer_2014
CompositeSet
6469SHHHHG1 | HLP3 | HPE3 | MCOPCB5 | SMMCI | TPT | TPTPSsonic hedgehog7q36CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
3757KCNH2ERG-1 | ERG1 | H-ERG | HERG | HERG1 | Kv11.1 | LQT2 | SQT1potassium voltage-gated channel subfamily H member 27q36.1ADT:Sun_2012
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
3361HTR5A5-HT5A5-hydroxytryptamine receptor 5A7q36.1ADT:Sun_2012
Association
CV:GWASdb
CV:PGCnp
GO_Annotation
GR_WM
PMID:cooccur
1804DPP6DPL1 | DPPX | MRD33 | VF2dipeptidyl peptidase like 67q36.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
10947AP3M2AP47B | CLA20 | P47Badaptor related protein complex 3 mu 2 subunit8p11.2CV:PGCnp
DMG:Jaffe_2016
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
6770STARSTARD1steroidogenic acute regulatory protein8p11.2CV:PGCnp
PMID:cooccur
8973CHRNA6CHNRA6cholinergic receptor nicotinic alpha 6 subunit8p11.21CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
155ADRB3BETA3ARadrenoceptor beta 38p11.23GO_Annotation
PMID:cooccur
GPCR SIGNALLING
3084NRG1ARIA | GGF | GGF2 | HGL | HRG | HRG1 | HRGA | MST131 | MSTP131 | NDF | NRG1-IT2 | SMDFneuregulin 18p12Association
Core
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
NEUROTROPHIN SIGNALING
1846DUSP4HVH2 | MKP-2 | MKP2 | TYPdual specificity phosphatase 48p12-p11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
8822FGF17FGF-13 | FGF-17 | HH20fibroblast growth factor 178p21CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
2053EPHX2CEH | SEHepoxide hydrolase 28p21CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
1135CHRNA2-cholinergic receptor nicotinic alpha 2 subunit8p21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
5368PNOCN/OFQ | NOP | OFQ | PPNOC | ppN/OFQprepronociceptin8p21CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_IIA
GSMA_IIE
PMID:cooccur
4747NEFLCMT1F | CMT2E | NF-L | NF68 | NFL | PPP1R110neurofilament, light polypeptide8p21CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
9NAT1AAC1 | MNAT | NAT-1 | NATIN-acetyltransferase 1 (arylamine N-acetyltransferase)8p22CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
10NAT2AAC2 | NAT-2 | PNATN-acetyltransferase 2 (arylamine N-acetyltransferase)8p22CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
9108MTMR7-myotubularin related protein 78p22CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
10395DLC1ARHGAP7 | HP | STARD12 | p122-RhoGAPDLC1 Rho GTPase activating protein8p22CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
6542SLC7A2ATRC2 | CAT2 | HCAT2solute carrier family 7 member 28p22CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
4023LPLHDLCQ11 | LIPDlipoprotein lipase8p22CV:GWASdb
CV:PGCnp
CV:PheWAS
Expression
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
9228DLGAP2DAP2 | SAPAP2discs large homolog associated protein 28p23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
1960EGR3EGR-3 | PILOTearly growth response 38p23-p21Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
1672DEFB1BD1 | DEFB-1 | DEFB101 | HBD1defensin beta 18p23.1CV:GWASdb
CV:PGCnp
79660PPP1R3BGL | PPP1R4 | PTGprotein phosphatase 1 regulatory subunit 3B8p23.1CV:PGCnp
9258MFHAS1LRRC65 | MASL1malignant fibrous histiocytoma amplified sequence 18p23.1CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
1581CYP7A1CP7A | CYP7 | CYPVIIcytochrome P450 family 7 subfamily A member 18q11-q12CV:PGCnp
4986OPRK1K-OR-1 | KOR | KOR-1 | OPRKopioid receptor, kappa 18q11.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
GPCR SIGNALLING
7274TTPAATTP | AVED | TTP1 | alphaTTPtocopherol (alpha) transfer protein8q12.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
CompositeSet
3612IMPA1IMP | IMPAinositol(myo)-1(or 4)-monophosphatase 18q21.13-q21.3CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
1807DPYSDHP | DHPasedihydropyrimidinase8q22CV:PGCnp
DMG:Wockner_2014
7071KLF10EGR-alpha | EGRA | TIEG | TIEG1Kruppel-like factor 108q22.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Expression
4956ODF1CT133 | HSPB10 | ODF | ODF2 | ODF27 | ODFP | ODFPG | ODFPGA | ODFPGB | RT7 | SODFouter dense fiber of sperm tails 18q22.3CV:GWASdb
CV:PGCnp
7201TRHRTRH-Rthyrotropin releasing hormone receptor8q23CV:PGCnp
DNM:Fromer_2014
CompositeSet
3786KCNQ3BFNC2 | EBN2 | KV7.3potassium voltage-gated channel subfamily Q member 38q24CV:PGCnp
DMG:Wockner_2014
Expression
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
7038TGAITD3 | TGNthyroglobulin8q24CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5747PTK2FADK | FAK | FAK1 | FRNK | PPP1R71 | p125FAK | pp125FAKprotein tyrosine kinase 28q24.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
2875GPTAAT1 | ALT1 | GPT1glutamic-pyruvate transaminase (alanine aminotransferase)8q24.3DMG:Wockner_2014
GO_Annotation
PMID:cooccur
23237ARCArg3.1activity-regulated cytoskeleton-associated protein8q24.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
2738GLI4HKR4 | ZNF928GLI family zinc finger 48q24.3CV:PGCnp
1211CLTALCAclathrin light chain A9p13CV:GWAScat
CV:PGCnp
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
25769SLC24A2NCKX2solute carrier family 24 member 29p22.1CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
6505SLC1A1DCBXA | EAAC1 | EAAT3 | SCZD18solute carrier family 1 member 19p24CV:PGCnp
GO_Annotation
PMID:cooccur
METABOTROPIC GLUTAMATE RECEPTOR
NEUROTRANSMITTER METABOLISM
Potential synaptic genes
3717JAK2JTK10 | THCYT3Janus kinase 29p24CV:PGCnp
GO_Annotation
Network
PMID:cooccur
81704DOCK8HEL-205 | MRD2 | ZIR8dedicator of cytokinesis 89p24.3CV:PGCnp
216ALDH1A1ALDC | ALDH-E1 | ALDH1 | ALDH11 | HEL-9 | HEL-S-53e | HEL12 | PUMB1 | RALDH1aldehyde dehydrogenase 1 family member A19q21.13CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
55582KIF27-kinesin family member 279q21.32CV:PGCnp
DMG:Wockner_2014
8013NR4A3CHN | CSMF | MINOR | NOR1 | TECnuclear receptor subfamily 4 group A member 39q22CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6850SYKp72-Sykspleen tyrosine kinase9q22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
Ascano FMRP targets
4915NTRK2GP145-TrkB | TRKB | trk-Bneurotrophic tyrosine kinase, receptor, type 29q22.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
TYROSINE KINASE SIGNALING
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
53358SHC3N-Shc | NSHC | RAI | SHCCSHC (Src homology 2 domain containing) transforming protein 39q22.1CV:PGCnp
GO_Annotation
2176FANCCFA3 | FAC | FACCFanconi anemia complementation group C9q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Ascano FMRP targets
7357UGCGGCS | GLCT1UDP-glucose ceramide glucosyltransferase9q31CV:PGCnp
54566EPB41L4BCG1 | EHM2erythrocyte membrane protein band 4.1 like 4B9q31-q32CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
116443GRIN3AGluN3A | NMDAR-L | NR3Aglutamate ionotropic receptor NMDA type subunit 3A9q31.1CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
54534MRPL50MRP-L50mitochondrial ribosomal protein L509q31.1DMG:Jaffe_2016
DMG:vanEijk_2014
4593MUSKCMS9 | FADSmuscle, skeletal, receptor tyrosine kinase9q31.3-q32CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
259AMBPA1M | EDC1 | HCP | HI30 | IATIL | ITI | ITIL | ITILC | UTIalpha-1-microglobulin/bikunin precursor9q32-q33CV:GWASdb
7099TLR4ARMD10 | CD284 | TLR-4 | TOLLtoll like receptor 49q33.1CV:PGCnp
PMID:cooccur
9355LHX2LH2 | hLhx2LIM homeobox 29q33.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
954ENTPD2CD39L1 | NTPDase-2ectonucleoside triphosphate diphosphohydrolase 29q34PMID:cooccur
3934LCN224p3 | MSFI | NGAL | p25lipocalin 29q34PMID:cooccur
203AK1HTL-S-58jadenylate kinase 19q34.1CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
4851NOTCH1AOS5 | AOVD1 | TAN1 | hN1notch 19q34.3CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
2902GRIN1GluN1 | MRD8 | NMD-R1 | NMDA1 | NMDAR1 | NR1glutamate ionotropic receptor NMDA type subunit 19q34.3Association
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Potential synaptic genes
10439OLFM1AMY | NOE1 | NOELIN1 | OlfAolfactomedin 19q34.3CV:PGCnp
DEG:Maycox_2009
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
5900RALGDSRGDS | RGF | RalGEFral guanine nucleotide dissociation stimulator9q34.3CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
DMG:Wockner_2014
DNM:Guipponi_2014
PMID:cooccur
CompositeSet
Darnell FMRP targets
51162EGFL7NEU1 | VE-STATIN | ZNEU1EGF like domain multiple 79q34.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
4129MAOB-monoamine oxidase BXp11.23CV:PGCnp
GO_Annotation
PMID:cooccur
DOPAMINE
NEUROTRANSMITTER METABOLISM
SEROTONIN
CompositeSet
Potential synaptic genes
30011SH3KBP1CD2BP3 | CIN85 | GIG10 | HSB-1 | HSB1 | MIG18SH3-domain kinase binding protein 1Xp22.1-p21.3CV:GWASdb
CV:PGCnp
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
22866CNKSR2CNK2 | KSR2 | MAGUINconnector enhancer of kinase suppressor of Ras 2Xp22.12CV:GWAScat
CV:PGC128
CV:PGCnp
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Potential synaptic genes
2925GRPRBB2gastrin releasing peptide receptorXp22.2CV:PGCnp
PMID:cooccur
Potential synaptic genes
1947EFNB1CFND | CFNS | EFB1 | EFL3 | EPLG2 | Elk-L | LERK2ephrin-B1Xq12CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
Network
54413NLGN3HNL3neuroligin 3Xq13.1CV:PGCnp
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
2182ACSL4ACS4 | FACL4 | LACS4 | MRX63 | MRX68acyl-CoA synthetase long-chain family member 4Xq22.3-q23CV:PGCnp
DNM:Fromer_2014
CompositeSet
Potential synaptic genes
5063PAK3MRX30 | MRX47 | OPHN3 | PAK-3 | PAK3beta | bPAK | beta-PAKp21 protein (Cdc42/Rac)-activated kinase 3Xq23CV:PGCnp
PMID:cooccur
Potential synaptic genes
3358HTR2C5-HT1C | 5-HT2C | 5-HTR2C | 5HTR2C | HTR1C5-hydroxytryptamine receptor 2CXq24ADT:Sun_2012
Association
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
Potential synaptic genes
2892GRIA3GLUR-C | GLUR-K3 | GLUR3 | GLURC | GluA3 | MRX94glutamate ionotropic receptor AMPA type subunit 3Xq25Association
CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanARC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
2556GABRA3-gamma-aminobutyric acid type A receptor alpha3 subunitXq28CV:PGCnp
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
Potential synaptic genes
4204MECP2AUTSX3 | MRX16 | MRX79 | MRXS13 | MRXSL | PPMX | RS | RTS | RTTmethyl-CpG binding protein 2Xq28CV:GWASdb
CV:PGCnp
DNM:McCarthy_2014
PMID:cooccur
Chromatin Remodeling Genes
3897L1CAMCAML1 | CD171 | HSAS | HSAS1 | MASA | MIC5 | N-CAM-L1 | N-CAML1 | NCAM-L1 | S10 | SPG1L1 cell adhesion moleculeXq28Association
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
G2Cdb.humanNRC
CompositeSet
3581IL9RCD129 | IL-9Rinterleukin 9 receptorXq28 and Yq12PMID:cooccur