Search results: The pahtway p2316 has 637 genes in the original annotation. Currently, there are 377 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
22921MSRB2CBS-1 | CBS1 | CGI-131 | MSRB | PILBmethionine sulfoxide reductase B210p12CV:PGCnp
PMID:cooccur
55388MCM10CNA43 | DNA43 | PRO2249minichromosome maintenance 10 replication initiation factor10p13CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
22929SEPHS1SELD | SPS | SPS1selenophosphate synthetase 110p14CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
7570ZNF22HKR-T1 | KOX15 | ZNF422 | Zfp422zinc finger protein 2210q11CV:PGCnp
23283CSTF2TCstF-64Tcleavage stimulation factor, 3' pre-RNA, subunit 2, tau variant10q11CV:PGCnp
983CDK1CDC2 | CDC28A | P34CDC2cyclin-dependent kinase 110q21.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
22891ZNF365Su48 | UAN | ZNF365Dzinc finger protein 36510q21.2CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
Darnell FMRP targets
84890ADOC10orf222-aminoethanethiol (cysteamine) dioxygenase10q21.3CV:PGCnp
Expression
PMID:cooccur
7414VCLCMD1W | CMH15 | HEL114 | MV | MVCLvinculin10q22.2CV:PGCnp
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
3988LIPACESD | LALlipase A, lysosomal acid type10q23.2-q23.3CV:GWASdb
CV:PGCnp
3087HHEXHEX | HMPH | HOX11L-PEN | PRH | PRHXhematopoietically expressed homeobox10q23.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GO_Annotation
10613ERLIN1C10orf69 | Erlin-1 | KE04 | KEO4 | SPFH1 | SPG62ER lipid raft associated 110q24.31CV:PGCnp
DMG:Jaffe_2016
51703ACSL5ACS2 | ACS5 | FACL5acyl-CoA synthetase long-chain family member 510q25.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
7390UROSUROIIISuroporphyrinogen III synthase10q25.2-q26.3CV:PGCnp
GSMA_IIA
8038ADAM12ADAM12-OT1 | CAR10 | MCMP | MCMPMltna | MLTN | MLTNAADAM metallopeptidase domain 1210q26CV:PGCnp
GSMA_IIA
PMID:cooccur
4288MKI67KIA | MIB- | MIB-1 | PPP1R105marker of proliferation Ki-6710q26.2CV:PGCnp
DNM:Fromer_2014
DNM:Gulsuner_2013
GSMA_IIA
CompositeSet
Ascano FMRP targets
627BDNFANON2 | BULN2brain-derived neurotrophic factor11p13Association
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTROPHIN SIGNALING
Potential synaptic genes
6764ST5DENND2B | HTS1 | p126suppression of tumorigenicity 511p15CV:PGCnp
DMG:Wockner_2014
2188FANCFFAFFanconi anemia complementation group F11p15CV:PGCnp
DMG:Jaffe_2016
161AP2A2ADTAB | CLAPA2 | HIP-9 | HIP9 | HYPJadaptor related protein complex 2 alpha 2 subunit11p15.5CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
DNM:Xu_2012
ENDOCYTOSIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
7106TSPAN4NAG-2 | NAG2 | TETRASPAN | TM4SF7 | TSPAN-4tetraspanin 411p15.5CV:PGCnp
DMG:Wockner_2014
10522DEAF1MRD24 | NUDR | SPN | ZMYND5DEAF1, transcription factor11p15.5CV:PGCnp
DMG:Wockner_2014
29015SLC43A3EEG1 | FOAP-13 | PRO1659 | SEEEG-1solute carrier family 43 member 311q11CV:PGCnp
26519TIMM10TIM10 | TIM10Atranslocase of inner mitochondrial membrane 10 homolog (yeast)11q12.1CV:PGCnp
PMID:cooccur
79073TMEM109-transmembrane protein 10911q12.2DMG:vanEijk_2014
80789INTS5INT5 | KIAA1698integrator complex subunit 511q12.3CV:PGCnp
DNM:McCarthy_2014
26229B3GAT3GLCATI | glcUAT-Ibeta-1,3-glucuronyltransferase 311q12.3DMG:vanEijk_2014
26580BSCL2GNG3LG | HMN5 | PELD | SPG17Berardinelli-Seip congenital lipodystrophy 2 (seipin)11q13DMG:Jaffe_2016
DMG:Wockner_2014
7351UCP2BMIQ4 | SLC25A8 | UCPHuncoupling protein 2 (mitochondrial, proton carrier)11q13Association
CV:PGCnp
GO_Annotation
PMID:cooccur
7108TM7SF2ANG1 | DHCR14A | NET47transmembrane 7 superfamily member 211q13DMG:Wockner_2014G2Cdb.humanPSD
G2Cdb.humanPSP
595CCND1BCL1 | D11S287E | PRAD1 | U21B31cyclin D111q13DMG:Jaffe_2016
Network
PMID:cooccur
79829NAA40NAT11 | PATT1N(alpha)-acetyltransferase 40, NatD catalytic subunit11q13.1CV:PGCnp
23649POLA2-polymerase (DNA) alpha 2, accessory subunit11q13.1CV:PGCnp
DMG:Jaffe_2016
6199RPS6KB2KLS | P70-beta | P70-beta-1 | P70-beta-2 | S6K-beta2 | S6K2 | SRK | STK14B | p70(S6K)-beta | p70S6Kbribosomal protein S6 kinase B211q13.2DMG:Jaffe_2016
65987KCTD14-potassium channel tetramerization domain containing 1411q14.1CV:GWASdb
CV:PGCnp
79053ALG8CDG1HALG8, alpha-1,3-glucosyltransferase11q14.1CV:PGCnp
11098PRSS23SIG13 | SPUVE | ZSIG13protease, serine 2311q14.1CV:GWASdb
CV:PGCnp
GO_Annotation
2526FUT4CD15 | ELFT | FCT3A | FUC-TIV | FUTIV | LeX | SSEA-1fucosyltransferase 411q21CV:GWASdb
CV:PGCnp
23052ENDOD1-endonuclease domain containing 111q21CV:PGCnp
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
4837NNMT-nicotinamide N-methyltransferase11q23.1CV:PGCnp
GSMA_I
PMID:cooccur
23705CADM1BL2 | IGSF4 | IGSF4A | NECL2 | Necl-2 | RA175 | ST17 | SYNCAM | TSLC1 | sTSLC-1 | sgIGSF | synCAM1cell adhesion molecule 111q23.2CV:PGCnp
DMG:Jaffe_2016
Expression
GO_Annotation
GSMA_I
Network
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
54494C11orf71URLC7chromosome 11 open reading frame 7111q23.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
6876TAGLNSM22 | SMCC | TAGLN1 | WS3-10transgelin11q23.2GSMA_I
2542SLC37A4G6PT1 | G6PT2 | G6PT3 | GSD1b | GSD1c | GSD1d | PRO0685 | TRG-19 | TRG19solute carrier family 37 member 411q23.3CV:PGCnp
GSMA_I
3145HMBSPBG-D | PBGD | PORC | UPShydroxymethylbilane synthase11q23.3Association
CV:PGCnp
GSMA_I
3014H2AFXH2A.X | H2A/X | H2AXH2A histone family member X11q23.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
4900NRGNRC3 | hngneurogranin11q24Association
CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
10205MPZL2EVA | EVA1myelin protein zero like 211q24CV:PGCnp
GSMA_I
6484ST3GAL4CGS23 | NANTA3 | SAT3 | SIAT4 | SIAT4C | ST3GalIV | STZST3 beta-galactoside alpha-2,3-sialyltransferase 411q24.2CV:PGCnp
80071CCDC15-coiled-coil domain containing 1511q24.2CV:PGCnp
51071DERACGI-26 | DEOCdeoxyribose-phosphate aldolase12p12.3CV:PGCnp
DMG:Wockner_2014
377ARF3-ADP ribosylation factor 312q13DEG:Maycox_2009
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
9194SLC16A7MCT2solute carrier family 16 member 712q13CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
2647BLOC1S1BLOS1 | BORCS1 | GCN5L1 | MICoA | RT14biogenesis of lysosomal organelles complex 1 subunit 112q13-q14Network
PMID:cooccur
10330CNPY2HP10390 | MSAP | TMEM4 | ZSIG9canopy FGF signaling regulator 212q15CV:PGCnp
56890MDM1-Mdm1 nuclear protein12q15CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
CompositeSet
9612NCOR2CTG26 | N-CoR2 | SMAP270 | SMRT | SMRTE | SMRTE-tau | TNRC14 | TRAC | TRAC-1 | TRAC1nuclear receptor corepressor 212q24CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
DNM:Gulsuner_2013
CompositeSet
Darnell FMRP targets
488ATP2A2ATP2B | DAR | DD | SERCA2ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 212q24.11CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
84900RNFT2TMEM118ring finger protein, transmembrane 212q24.22CV:PGCnp
DMG:Wockner_2014
22877MLXIPMIR | MONDOA | bHLHe36MLX interacting protein12q24.31CV:PGCnp
DMG:Montano_2016
10198MPHOSPH9MPP-9 | MPP9M-phase phosphoprotein 912q24.31CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
LK:YES
5983RFC3RFC38replication factor C subunit 313q13.2CV:PGCnp
DMG:Jaffe_2016
10301DLEU1BCMS | BCMS1 | DLB1 | DLEU2 | LEU1 | LEU2 | LINC00021 | NCRNA00021 | XTP6deleted in lymphocytic leukemia 1 (non-protein coding)13q14.3CV:PGCnp
DMG:Wockner_2014
55757UGGT2HUGT2 | UGCGL2 | UGT2UDP-glucose glycoprotein glucosyltransferase 213q32.1CV:PGCnp
79070KDELC1EP58 | ERp58 | KDEL1KDEL motif containing 113q33CV:PGCnp
DMG:Nishioka_2013
1282COL4A1BSVD | RATORcollagen type IV alpha 113q34CV:GWASdb
CV:PGCnp
1284COL4A2ICH | POREN2collagen type IV alpha 213q34CV:GWAScat
CV:GWASdb
CV:PGCnp
79178THTPATHTP | THTPASEthiamine triphosphatase14q11.2DMG:Jaffe_2016
GSMA_I
80224NUBPLC14orf127 | IND1 | huInd1nucleotide binding protein like14q12CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
171546SPTSSAC14orf147 | SSSPTAserine palmitoyltransferase small subunit A14q13.1CV:GWASdb
CV:PGCnp
5427POLE2DPE2polymerase (DNA) epsilon 2, accessory subunit14q21-q22CV:PGCnp
5411PNNDRS | DRSP | SDK3 | memApinin, desmosome associated protein14q21.1CV:PGCnp
DEG:Maycox_2009
PMID:cooccur
55172DNAAF2C14orf104 | CILD10 | KTU | PF13dynein (axonemal) assembly factor 214q21.3CV:PGCnp
Expression
1033CDKN3CDI1 | CIP2 | KAP | KAP1cyclin-dependent kinase inhibitor 314q22CV:GWAScat
CV:GWASdb
CV:PGCnp
DNM:Kranz_2015
PMID:cooccur
81542TMX1PDIA11 | TMX | TXNDC | TXNDC1thioredoxin related transmembrane protein 114q22.1CV:PGCnp
7597ZBTB25C14orf51 | KUP | ZNF46zinc finger and BTB domain containing 2514q23-q24CV:PGCnp
DMG:Wockner_2014
2342FNTBFPTBfarnesyltransferase, CAAX box, beta14q23.3CV:PGCnp
55333SYNJ2BPARIP2 | OMP25synaptojanin 2 binding protein14q24.2CV:PGCnp
56252YLPM1C14orf170 | PPP1R169 | ZAP113 | ZAP3YLP motif containing 114q24.3CV:GWASdb
CV:PGCnp
55148UBR7C14orf130ubiquitin protein ligase E3 component n-recognin 7 (putative)14q32.12CV:PGCnp
51218GLRX5C14orf87 | FLB4739 | GRX5 | PR01238 | PRO1238 | PRSAglutaredoxin 514q32.13CV:PGCnp
DMG:Nishioka_2013
9529BAG5BAG-5BCL2 associated athanogene 514q32.33CV:PGCnp
DMG:Wockner_2014
55038CDCA4HEPP | SEI-3/HEPPcell division cycle associated 414q32.33DMG:Wockner_2014
321APBA2D15S1518E | HsT16821 | LIN-10 | MGC:14091 | MINT2 | X11-BETA | X11Lamyloid beta precursor protein binding family A member 215q11-q12CV:PGCnp
GO_Annotation
PMID:cooccur
Ascano FMRP targets
Potential synaptic genes
4212MEIS2HsT18361 | MRG1Meis homeobox 215q14CV:PGCnp
PMID:cooccur
3712IVDACAD2isovaleryl-CoA dehydrogenase15q14-q15CV:PGCnp
PMID:cooccur
11245GPR176HB-954G protein-coupled receptor 17615q14-q15.1CV:PGCnp
GO_Annotation
7057THBS1THBS | THBS-1 | TSP | TSP-1 | TSP1thrombospondin 115q15CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
79968WDR76CDW14WD repeat domain 7615q15.3CV:PGCnp
Expression
9836LCMT2PPM2 | TYW4leucine carboxyl methyltransferase 215q15.3CV:PGCnp
DMG:Jaffe_2016
1854DUTdUTPasedeoxyuridine triphosphatase15q21.1CV:GWASdb
DMG:vanEijk_2014
PMID:cooccur
2200FBN1ACMICD | ECTOL1 | FBN | GPHYSD2 | MASS | MFS1 | OCTD | SGS | SSKS | WMS | WMS2fibrillin 115q21.1CV:GWASdb
CV:PGCnp
PMID:cooccur
Ascano FMRP targets
5873RAB27AGS2 | HsT18676 | RAB27 | RAMRAB27A, member RAS oncogene family15q21.3CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GO_Annotation
102ADAM10AD10 | AD18 | CD156c | CDw156 | HsT18717 | MADM | RAK | kuzADAM metallopeptidase domain 1015q22CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10116FEM1BF1A-ALPHA | F1AA | FEM1-betafem-1 homolog b (C. elegans)15q22DMG:Nishioka_2013
4016LOXL1LOL | LOXLlysyl oxidase like 115q22CV:PGCnp
CV:PheWAS
4828NMB-neuromedin B15q22-qterCV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
56906THAP10-THAP domain containing 1015q23DEG:Sanders_2013
597BCL2A1ACC-1 | ACC-2 | ACC1 | ACC2 | BCL2L5 | BFL1 | GRS | HBPA1BCL2 related protein A115q24.3CV:GWASdb
CV:PGCnp
23102TBC1D2B-TBC1 domain family member 2B15q24.3-q25.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
64963MRPS11HCC-2mitochondrial ribosomal protein S1115q25CV:PGCnp
5046PCSK6PACE4 | SPC4proprotein convertase subtilisin/kexin type 615q26.3CV:PGCnp
GO_Annotation
PMID:cooccur
29108PYCARDASC | CARD5 | TMS | TMS-1 | TMS1PYD and CARD domain containing16p11.2CV:PGCnp
DNM:Fromer_2014
GSMA_IIE
CompositeSet
11151CORO1ACLABP | CLIPINA | HCORO1 | IMD8 | TACO | p57coronin 1A16p11.2CNV:YES
CV:PGCnp
GSMA_IIE
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Potential synaptic genes
81691LOC81691-exonuclease NEF-sp16p12.3CV:PGCnp
GSMA_IIE
3163HMOX2HO-2heme oxygenase 216p13.3CV:PGCnp
DMG:Wockner_2014
283871PGPPGPasephosphoglycolate phosphatase16p13.3PMID:cooccur
124222PAQR4-progestin and adipoQ receptor family member IV16p13.3CV:PGCnp
DMG:Wockner_2014
90861HN1LC16orf34 | L11hematological and neurological expressed 1-like16p13.3CV:PGCnp
DMG:Wockner_2014
899CCNFFBX1 | FBXO1cyclin F16p13.3CV:PGCnp
DMG:Nishioka_2013
5934RBL2P130 | Rb2retinoblastoma-like 216q12.2CV:PGCnp
80011FAM192AC16orf94 | CDA018 | CDA10 | NIP30family with sequence similarity 192 member A16q13CV:PGCnp
51192CKLFC32 | CKLF1 | CKLF2 | CKLF3 | CKLF4 | HSPC224 | UCK-1chemokine-like factor16q21CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
29109FHOD1FHOSformin homology 2 domain containing 116q22CV:PGCnp
DMG:Jaffe_2016
54496PRMT7-protein arginine methyltransferase 716q22.1CV:GWASdb
CV:PGCnp
Ascano FMRP targets
Chromatin Remodeling Genes
50855PARD6APAR-6A | PAR6 | PAR6C | PAR6alpha | TAX40 | TIP-40par-6 family cell polarity regulator alpha16q22.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
5699PSMB10LMP10 | MECL1 | beta2iproteasome subunit beta 1016q22.1CV:PGCnp
Expression
23536ADAT1HADAT1adenosine deaminase, tRNA specific 116q23.1CV:PGCnp
51659GINS2HSPC037 | PSF2 | Pfs2GINS complex subunit 2 (Psf2 homolog)16q24.1CV:PGCnp
79791FBXO31FBX14 | FBXO14 | Fbx31 | MRT45 | pp2386F-box protein 3116q24.2CV:PGCnp
DNM:Fromer_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
2175FANCAFA | FA-H | FA1 | FAA | FACA | FAH | FANCHFanconi anemia complementation group A16q24.3CV:PGCnp
6470SHMT1CSHMT | SHMTserine hydroxymethyltransferase 1 (soluble)17p11.2CV:PGCnp
PMID:cooccur
50628GEMIN4HC56 | HCAP1 | HHRF-1 | p97gem nuclear organelle associated protein 417p13CV:PGCnp
DMG:vanEijk_2014
Network
PMID:cooccur
Ascano FMRP targets
54478FAM64ACATS | RCS1family with sequence similarity 64 member A17p13.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
51479ANKFY1ANKHZN | BTBD23 | ZFYVE14ankyrin repeat and FYVE domain containing 117p13.3CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Ascano FMRP targets
8402SLC25A11OGC | SLC20A4solute carrier family 25 member 1117p13.3DEG:Maycox_2009
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
51701NLK-nemo-like kinase17q11.2CV:PGCnp
6347CCL2GDCF-2 | HC11 | HSMCR30 | MCAF | MCP-1 | MCP1 | SCYA2 | SMC-CFC-C motif chemokine ligand 217q11.2-q12CV:PGCnp
Expression
PMID:cooccur
5193PEX12PAF-3 | PBD3Aperoxisomal biogenesis factor 1217q12CV:PGCnp
DMG:Jaffe_2016
79154DHRS11ARPG836 | SDR24C1 | spDHRS11dehydrogenase/reductase (SDR family) member 1117q12CNV:YES
CV:PGCnp
55106SLFN12SLFN3schlafen family member 1217q12DMG:Wockner_2014
8396PIP4K2BPI5P4KB | PIP5K2B | PIP5KIIB | PIP5KIIbeta | PIP5P4KBphosphatidylinositol-5-phosphate 4-kinase, type II, beta17q12CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6928HNF1BFJHN | HNF-1-beta | HNF-1B | HNF1beta | HNF2 | HPC11 | LF-B3 | LFB3 | MODY5 | TCF-2 | TCF2 | VHNF1HNF1 homeobox B17q12CNV:YES
CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
10197PSME3HEL-S-283 | Ki | PA28-gamma | PA28G | PA28gamma | REG-GAMMAproteasome activator subunit 317q21CV:PGCnp
DMG:vanEijk_2014
Expression
Network
7153TOP2ATOP2 | TP2Atopoisomerase (DNA) II alpha17q21.2CV:PGCnp
Network
PMID:cooccur
Ascano FMRP targets
10614HEXIM1CLP1 | EDG1 | HIS1 | MAQ1hexamethylene bis-acetamide inducible 117q21.31CV:PGCnp
DMG:Jaffe_2016
7343UBTFNOR-90 | UBF | UBF-1 | UBF1 | UBF2upstream binding transcription factor, RNA polymerase I17q21.31CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
516ATP5G1ATP5A | ATP5GATP synthase, H+ transporting, mitochondrial Fo complex subunit C1 (subunit 9)17q21.32CV:PGCnp
DMG:Jaffe_2016
3690ITGB3BDPLT16 | BDPLT2 | CD61 | GP3A | GPIIIa | GTintegrin subunit beta 317q21.32CV:PGCnp
Network
PMID:cooccur
5889RAD51CBROVCA3 | FANCO | R51H3 | RAD51L2RAD51 paralog C17q22CV:PGCnp
DMG:Wockner_2014
64750SMURF2-SMAD specific E3 ubiquitin protein ligase 217q22-q23CV:PGCnp
DMG:Jaffe_2016
7126TNFAIP1B12 | B61 | BTBD34 | EDP1 | hBACURD2TNF alpha induced protein 117q22-q23CV:PGCnp
DNM:Fromer_2014
CompositeSet
83990BRIP1BACH1 | FANCJ | OFBRCA1 interacting protein C-terminal helicase 117q22.2CV:PGCnp
DMG:Nishioka_2013
6662SOX9CMD1 | CMPD1 | SRA1 | SRXX2 | SRXY10SRY-box 917q24.3CV:PGCnp
PMID:cooccur
65258MPPE1PGAP5metallophosphoesterase 118p11.21CV:PGCnp
DMG:Nishioka_2013
9331B4GALT6B4Gal-T6 | beta4Gal-T6UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 618q11CV:PGCnp
PMID:cooccur
30827CXXC12410002I16Rik | 5830420C16Rik | CFP1 | CGBP | HsT2645 | PCCX1 | PHF18 | SPP1 | ZCGPC1 | hCGBPCXXC finger protein 118q12CV:PGCnpAscano FMRP targets
596BCL2Bcl-2 | PPP1R50B-cell CLL/lymphoma 218q21.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
Network
PMID:cooccur
23327NEDD4LNEDD4-2 | NEDD4.2 | RSP5 | hNEDD4-2neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase18q21.31CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
23335WDR7TRAGWD repeat domain 718q21.31CV:PGCnp
CV:PheWAS
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
23556PIGNMCAHS | MCAHS1 | MCD4 | MDC4 | PIG-Nphosphatidylinositol glycan anchor biosynthesis class N18q21.33CV:PGCnp
1528CYB5ACYB5 | MCB5cytochrome b5 type A (microsomal)18q23CV:PGCnp
DMG:Jaffe_2016
81931ZNF93HPF34 | HTF34 | TF34 | ZNF505zinc finger protein 9319p12CV:PGCnp
CV:PheWAS
4713NDUFB7B18 | CI-B18NADH:ubiquinone oxidoreductase subunit B719p13.12CV:PGCnpCompositeSet
8677STX10SYN10 | hsyn10syntaxin 1019p13.2CV:PGCnp
3383ICAM1BB2 | CD54 | P3.58intercellular adhesion molecule 119p13.2CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
DNM:McCarthy_2014
3385ICAM3CD50 | CDW50 | ICAM-Rintercellular adhesion molecule 319p13.2CV:PGCnp
DMG:Montano_2016
PMID:cooccur
2193FARSACML33 | FARSL | FARSLA | FRSA | PheHAphenylalanyl-tRNA synthetase alpha subunit19p13.2CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
5438POLR2IRPB9 | hRPB14.5polymerase (RNA) II subunit I19q12CV:PGCnp
DMG:Jaffe_2016
898CCNE1CCNE | pCCNE1cyclin E119q12CV:PGCnp
DMG:Montano_2016
Network
2109ETFBFP585 | MADDelectron transfer flavoprotein beta subunit19q13.3CV:PGCnp
DMG:Nishioka_2013
79763ISOC2-isochorismatase domain containing 219q13.42CV:PGCnp
DMG:Jaffe_2016
Network
10745PHTF1PHTFputative homeodomain transcription factor 11p13CV:PGCnp
DMG:Wockner_2014
GSMA_I
4803NGFBeta-NGF | HSAN5 | NGFBnerve growth factor1p13.1CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
79084WDR77HKMT1069 | MEP-50 | MEP50 | Nbla10071 | p44 | p44/Mep50WD repeat domain 771p13.2CV:PGCnp
Expression
GSMA_I
2135EXTL2EXTR2exostosin-like glycosyltransferase 21p21CV:PGCnp
2633GBP1-guanylate binding protein 11p22.2CV:PGCnp
PMID:cooccur
10026PIGKGPI8phosphatidylinositol glycan anchor biosynthesis class K1p31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIA
G2Cdb.humanPSD
G2Cdb.humanPSP
4919ROR1NTRKR1 | dJ537F10.1receptor tyrosine kinase-like orphan receptor 11p31.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
PMID:cooccur
26292MYCBPAMY-1MYC binding protein1p33-p32.2DMG:Nishioka_2013
2517FUCA1FUCAfucosidase, alpha-L- 1, tissue1p34CV:PGCnp
DMG:Wockner_2014
7804LRP8APOER2 | HSZ75190 | LRP-8 | MCI1LDL receptor related protein 81p34CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Potential synaptic genes
7805LAPTM5CLAST6lysosomal protein transmembrane 51p34CV:PGCnp
204AK2ADK2adenylate kinase 21p34CV:PGCnp
Network
3652IPPKLHL27intracisternal A particle-promoted polypeptide1p34-p32CV:PGCnp
PMID:cooccur
127703C1orf216-chromosome 1 open reading frame 2161p34.3CV:PGCnp
1969EPHA2ARCC2 | CTPA | CTPP1 | CTRCT6 | ECKEPH receptor A21p36CV:PGCnp
DNM:Fromer_2014
GO_Annotation
CompositeSet
6924TCEB3EloA | SIII | SIII p110 | TCEB3Atranscription elongation factor B subunit 31p36.1CV:PGCnp
DMG:Jaffe_2016
55721IQCC-IQ motif containing C1p36.11-p34.2CV:GWASdb
DMG:Nishioka_2013
DMG:Wockner_2014
79140CCDC28B-coiled-coil domain containing 28B1p36.11-p34.2CV:PGCnp
DMG:vanEijk_2014
3399ID3HEIR-1 | bHLHb25inhibitor of DNA binding 3, HLH protein1p36.13-p36.12CV:PGCnp
PMID:cooccur
79180EFHD2SWS1EF-hand domain family member D21p36.21CV:PGCnp
PMID:cooccur
CompositeSet
56998CTNNBIP1ICATcatenin beta interacting protein 11p36.22CV:PGCnp
DMG:Wockner_2014
Network
23435TARDBPALS10 | TDP-43TAR DNA binding protein1p36.22CV:PGCnp
PMID:cooccur
378708APITD1CENP-S | CENPS | FAAP16 | MHF1apoptosis-inducing, TAF9-like domain 11p36.22CV:PGCnp
DMG:Wockner_2014
51205ACP6ACPL1 | LPAP | PACPL1acid phosphatase 6, lysophosphatidic1q21CNV:YES
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
8799PEX11BPEX11-BETA | PEX14Bperoxisomal biogenesis factor 11 beta1q21.1CNV:YES
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
9939RBM8ABOV-1A | BOV-1B | BOV-1C | C1DELq21.1 | DEL1q21.1 | MDS014 | RBM8 | RBM8B | TAR | Y14 | ZNRP | ZRNP1RNA binding motif protein 8A1q21.1CNV:YES
GSMA_I
GSMA_IIA
PMID:cooccur
2029ENSAARPP-19eendosulfine alpha1q21.3CV:PGCnp
DEG:Zhao_2015
Expression
GO_Annotation
GR_Ng
GSMA_I
GSMA_IIA
INTRACELLULAR SIGNAL TRANSDUCTION
79590MRPL24L24mt | MRP-L18 | MRP-L24mitochondrial ribosomal protein L241q23.1CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
5999RGS4RGP4 | SCZD9regulator of G-protein signaling 41q23.3Association
Core
CV:GWASdb
CV:PGCnp
GR_COR
GR_Ng
GR_WM
GSMA_IIA
Network
PMID:cooccur
Potential synaptic genes
64222TOR3AADIR | ADIR2torsin family 3 member A1q25.2CV:PGCnp
DMG:Jaffe_2016
5877RABIFMSS4 | RASGFR3 | RASGRF3RAB interacting factor1q32.1DMG:Jaffe_2016INTRACELLULAR TRAFFICKING
5362PLXNA2OCT | PLXN2plexin A21q32.2Association
Core
CV:GWASdb
CV:PGCnp
GR_COR
GR_Ng
GR_WM
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
4811NID1NIDnidogen 11q43CV:GWASdb
CV:PGCnp
9156EXO1HEX1 | hExoIexonuclease 11q43CV:GWASdb
CV:PGCnp
6000RGS7-regulator of G-protein signaling 71q43|1q23.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Network
PMID:cooccur
GPCR SIGNALLING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
114548NLRP3AGTAVPRL | AII | AVP | C1orf7 | CIAS1 | CLR1.1 | FCAS | FCAS1 | FCU | MWS | NALP3 | PYPAF1NLR family, pyrin domain containing 31q44CV:PGCnp
PMID:cooccur
182JAG1AGS | AHD | AWS | CD339 | HJ1 | JAGL1jagged 120p12.1-p11.23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
GO_Annotation
GSMA_I
PMID:cooccur
Ascano FMRP targets
8455ATRNDPPT-L | MGCAattractin20p13CV:PGCnp
PMID:cooccur
598BCL2L1BCL-XL/S | BCL2L | BCLX | Bcl-X | PPP1R52BCL2 like 120q11.21GO_Annotation
Network
PMID:cooccur
11264PXMP4PMP24peroxisomal membrane protein 420q11.22CV:PGCnp
DMG:Nishioka_2013
60436TGIF2-TGFB induced factor homeobox 220q11.23CV:PGCnp
DMG:Wockner_2014
10904BLCAPBC10bladder cancer associated protein20q11.23CV:PGCnp
DMG:Jaffe_2016
23051ZHX3TIX1zinc fingers and homeoboxes 320q12CV:PGCnp
DMG:Jaffe_2016
CompositeSet
Darnell FMRP targets
7052TGM2G-ALPHA-h | GNAH | HEL-S-45 | TG2 | TGCtransglutaminase 220q12CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
PMID:cooccur
CompositeSet
958CD40Bp50 | CDW40 | TNFRSF5 | p50CD40 molecule20q12-q13.2CV:GWASdb
CV:PGCnp
PMID:cooccur
1591CYP24A1CP24 | CYP24 | HCAI | P450-CC24cytochrome P450 family 24 subfamily A member 120q13CV:PGCnp
PMID:cooccur
874CBR3HEL-S-25 | SDR21C2 | hCBR3carbonyl reductase 321q22.2CV:PGCnpCompositeSet
64976MRPL40L40mt | MRP-L22 | MRP-L40 | MRPL22 | NLVCF | URIMmitochondrial ribosomal protein L4022q11.2CNV:YES
CV:PGCnp
GSMA_I
PMID:cooccur
79680C22orf29BOPchromosome 22 open reading frame 2922q11.21CNV:YES
CV:PGCnp
GSMA_I
9647PPM1FCAMKP | CaMKPase | FEM-2 | POPX2 | hFEM-2protein phosphatase, Mg2+/Mn2+ dependent 1F22q11.22CV:GWASdb
CV:PGCnp
GSMA_I
2953GSTT2-glutathione S-transferase theta 2 (gene/pseudogene)22q11.23CV:PGCnp
Expression
GSMA_I
PMID:cooccur
29796UQCR10HSPC051 | HSPC119 | HSPC151 | QCR9 | UCCR7.2 | UCRCubiquinol-cytochrome c reductase, complex III subunit X22q12.2CV:PGCnp
GSMA_I
PMID:cooccur
55000TUG1LINC00080 | NCRNA00080 | TI-227Htaurine up-regulated 1 (non-protein coding)22q12.2CV:PGCnp
6525SMTN-smoothelin22q12.2CV:PGCnp
GSMA_I
5155PDGFBIBGC5 | PDGF-2 | PDGF2 | SIS | SSV | c-sisplatelet derived growth factor subunit B22q13.1CV:PGCnp
GO_Annotation
PMID:cooccur
29775CARD10BIMP1 | CARMA3caspase recruitment domain family member 1022q13.1CV:PGCnp
DMG:Montano_2016
8542APOL1APO-L | APOL | APOL-I | FSGS4apolipoprotein L122q13.1CV:PGCnp
PMID:cooccur
5880RAC2EN-7 | Gx | HSPC022 | p21-Rac2ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)22q13.1CV:GWASdb
CV:PGCnp
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
25828TXN2COXPD29 | MT-TRX | MTRX | TRX2thioredoxin 222q13.1CV:PGCnp
27349MCATFASN2C | MCT | MT | NET62 | fabDmalonyl-CoA-acyl carrier protein transacylase22q13.31CV:PGCnp
3625INHBB-inhibin beta B2cen-q13CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
2677GGCXVKCFD1gamma-glutamyl carboxylase2p12CV:PGCnp
DMG:Jaffe_2016
GSMA_I
3099HK2HKII | HXK2hexokinase 22p13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
84168ANTXR1ATR | GAPO | TEM8anthrax toxin receptor 12p13.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
2202EFEMP1DHRD | DRAD | FBLN3 | FBNL | FIBL-3 | MLVT | MTLV | S1-5EGF containing fibulin-like extracellular matrix protein 12p16CV:PGCnp
PMID:cooccur
55120FANCLFAAP43 | PHF9 | POGFanconi anemia complementation group L2p16.1CV:PGCnp
51232CRIM1CRIM-1 | S52cysteine rich transmembrane BMP regulator 1 (chordin-like)2p21CV:PGCnp
GO_Annotation
27436EML4C2orf2 | ELP120 | EMAP-4 | EMAPL4 | ROPP120echinoderm microtubule associated protein like 42p21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
10602CDC42EP3BORG2 | CEP3 | UB1CDC42 effector protein 32p21CV:GWASdb
CV:PGCnp
PMID:cooccur
5281PIGF-phosphatidylinositol glycan anchor biosynthesis class F2p21-p16CV:PGCnp
PMID:cooccur
6432SRSF79G8 | AAG3 | SFRS7serine/arginine-rich splicing factor 72p22.1CV:PGCnp
79833GEMIN6-gem nuclear organelle associated protein 62p22.1CV:PGCnp
DMG:Nishioka_2013
8884SLC5A6SMVTsolute carrier family 5 member 62p23CV:PGCnp
DMG:Wockner_2014
60509AGBL5CCP5ATP/GTP binding protein-like 52p23.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
2976GTF3C2TFIIIC-BETA | TFIIIC110general transcription factor IIIC subunit 22p23.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
1622DBIACBD1 | ACBP | CCK-RP | EPdiazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)2q12-q21CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
CELL METABOLISM
7851MALLBENEmal, T-cell differentiation protein-like2q13CV:PGCnp
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
699BUB1BUB1A | BUB1L | hBUB1BUB1 mitotic checkpoint serine/threonine kinase2q14CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
2019EN1-engrailed homeobox 12q14.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
26469PTPN18BDP1 | PTP-HSCFprotein tyrosine phosphatase, non-receptor type 182q21.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
26225ARL5AARFLP5 | ARL5ADP ribosylation factor like GTPase 5A2q23.3CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
8604SLC25A12AGC1 | ARALARsolute carrier family 25 member 122q24CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
GO_Annotation
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
8502PKP4p0071plakophilin 42q24.1CV:PGCnp
GSMA_IIA
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
57405SPC25AD024 | SPBC25 | hSpc25SPC25, NDC80 kinetochore complex component2q31.1CV:GWASdb
CV:PGCnp
GSMA_IIA
5378PMS1HNPCC3 | MLH2 | PMSL1 | hPMS1PMS1 homolog 1, mismatch repair system component2q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
2335FN1CIG | ED-B | FINC | FN | FNZ | GFND | GFND2 | LETS | MSFfibronectin 12q34CV:PGCnp
DNM:Fromer_2014
DNM:Guipponi_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
CompositeSet
580BARD1-BRCA1 associated RING domain 12q35CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
3667IRS1HIRS-1insulin receptor substrate 12q36CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
DMG:Wockner_2014
DNM:Xu_2012
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
79083MLPHSLAC2-Amelanophilin2q37.3CV:PGCnp
DMG:Nishioka_2013
1841DTYMKCDC8 | PP3731 | TMPK | TYMKdeoxythymidylate kinase2q37.3CV:PGCnp
DMG:Jaffe_2016
1605DAG1156DAG | A3a | AGRNR | DAG | MDDGA9 | MDDGC7 | MDDGC9dystroglycan 13p21CV:PGCnp
DMG:Jaffe_2016
6988TCTA-T-cell leukemia translocation altered3p21CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
7474WNT5AhWNT5Awingless-type MMTV integration site family member 5A3p21-p14CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
10217CTDSPLC3orf8 | HYA22 | PSR1 | RBSP3 | SCP3CTD small phosphatase like3p21.3CV:PGCnp
GSMA_I
9941EXOGENDOGL1 | ENDOGL2 | ENGL | ENGL-a | ENGL-b | ENGLA | ENGLBendo/exonuclease (5'-3'), endonuclease G-like3p21.3CV:PGCnp
GSMA_I
8692HYAL2LUCA2hyaluronoglucosaminidase 23p21.3CV:PGCnp
11277TREX1AGS1 | CRV | DRN3 | HERNSthree prime repair exonuclease 13p21.31DMG:Wockner_2014
788SLC25A20CAC | CACTsolute carrier family 25 member 203p21.31CV:PGCnp
DMG:Wockner_2014
Expression
7048TGFBR2AAT3 | FAA3 | LDS1B | LDS2 | LDS2B | MFS2 | RIIC | TAAD2 | TGFR-2 | TGFbeta-RIItransforming growth factor beta receptor II3p22CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
23228PLCL2PLCE2phospholipase C like 23p24.3CV:PGCnp
DNM:Xu_2012
GSMA_I
CompositeSet
Ascano FMRP targets
80746TSEN2PCH2B | SEN2 | SEN2LtRNA splicing endonuclease subunit 23p25.2CV:PGCnp
DMG:Wockner_2014
GSMA_I
6419SETMARMETNASE | Mar1SET domain and mariner transposase fusion gene3p26.1CV:PGCnp
DMG:Wockner_2014
Chromatin Remodeling Genes
51421AMOTL2LCCPangiomotin like 23q21-q22CV:PGCnp
DMG:Wockner_2014
GO_Annotation
545ATRFCTCS | FRP1 | MEC1 | SCKL | SCKL1ATR serine/threonine kinase3q23CV:PGCnp
PMID:cooccur
Ascano FMRP targets
5010CLDN11OSP | OTMclaudin 113q26.2-q26.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
G2Cdb.humanPSD
3280HES1HES-1 | HHL | HRY | bHLHb39hes family bHLH transcription factor 13q28-q29CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GO_Annotation
PMID:cooccur
622BDH1BDH | SDR9C13-hydroxybutyrate dehydrogenase, type 13q29CNV:YES
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
116984ARAP2CENTD1 | PARXArfGAP with RhoGAP domain, ankyrin repeat and PH domain 24p14CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
5099PCDH7BH-Pcdh | BHPCDH | PPP1R120protocadherin 74p15CV:GWASdb
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
10874NMU-neuromedin U4q12CV:PGCnp
DMG:Wockner_2014
GO_Annotation
9508ADAMTS3ADAMTS-4ADAM metallopeptidase with thrombospondin type 1 motif 34q13.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
10611PDLIM5ENH | ENH1 | L9 | LIMPDZ and LIM domain 54q22Association
CV:PGCnp
Expression
GR_COR
GR_Ng
GR_WM
PMID:cooccur
56898BDH2DHRS6 | EFA6R | PRO20933 | SDR15C1 | UCPA-OR | UNQ63083-hydroxybutyrate dehydrogenase, type 24q24CV:PGCnp
64116SLC39A8BIGM103 | CDG2N | LZT-Hs6 | PP3105 | ZIP8solute carrier family 39 member 84q24CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
79071ELOVL6FACE | FAE | LCEELOVL fatty acid elongase 64q25CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
DMG:Wockner_2014
51176LEF1LEF-1 | TCF10 | TCF1ALPHA | TCF7L3lymphoid enhancer binding factor 14q25CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
10424PGRMC2DG6 | PMBPprogesterone receptor membrane component 24q26CV:PGCnp
4258MGST2GST2 | MGST-IImicrosomal glutathione S-transferase 24q28.3CV:PGCnp
6502SKP2FBL1 | FBXL1 | FLB1 | p45S-phase kinase-associated protein 2, E3 ubiquitin protein ligase5p13CV:PGCnp
4726NDUFS6CI-13kA | CI-13kD-A | CI13KDANADH:ubiquinone oxidoreductase subunit S65p15.33CV:PGCnp
DMG:Jaffe_2016
10769PLK2SNK | hPlk2 | hSNKpolo like kinase 25q12.1-q13.2CV:PGCnp
8507ENC1CCL28 | ENC-1 | KLHL35 | KLHL37 | NRPB | PIG10 | TP53I10ectodermal-neural cortex 15q13CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
CompositeSet
Darnell FMRP targets
79810PTCD2-pentatricopeptide repeat domain 25q13.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
1462VCANCSPG2 | ERVR | GHAP | PG-M | WGN | WGN1versican5q14.3CV:PGCnp
DMG:Jaffe_2016
Expression
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
22836RHOBTB3-Rho related BTB domain containing 35q15CV:GWASdb
CV:PGCnp
DMG:Nishioka_2013
Expression
PMID:cooccur
5480PPICCYPCpeptidylprolyl isomerase C5q23.2CV:PGCnp
PMID:cooccur
4001LMNB1ADLD | LMN | LMN2 | LMNBlamin B15q23.2CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
Network
G2Cdb.humanNRC
7045TGFBIBIGH3 | CDB1 | CDG2 | CDGG1 | CSD | CSD1 | CSD2 | CSD3 | EBMD | LCD1transforming growth factor beta induced5q31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
154ADRB2ADRB2R | ADRBR | B2AR | BAR | BETA2ARadrenoceptor beta 25q31-q32CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
GPCR SIGNALLING
55374TMCO6PRO1580transmembrane and coiled-coil domains 65q31.3CV:PGCnp
GSMA_I
78991PCYOX1L-prenylcysteine oxidase 1 like5q32CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
1836SLC26A2D5S1708 | DTD | DTDST | EDM4 | MST153 | MSTP157solute carrier family 26 member 25q32CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
GSMA_IIE
11346SYNPO-synaptopodin5q33.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_mGluR5
CompositeSet
Darnell FMRP targets
Potential synaptic genes
55568GALNT10GALNACT10 | PPGALNACT10 | PPGANTASE10polypeptide N-acetylgalactosaminyltransferase 105q33.2CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
23286WWC1HBEBP3 | HBEBP36 | KIBRA | MEMRYQTL | PPP1R168WW and C2 domain containing 15q34CV:PGCnp
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
1212CLTBLCBclathrin light chain B5q35CV:PGCnp
DMG:Jaffe_2016
DMG:vanEijk_2014
GSMA_IIA
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
55651NHP2DKCB2 | NHP2P | NOLA2NHP2 ribonucleoprotein5q35.3CV:PGCnp
DMG:Wockner_2014
4172MCM3HCC5 | P1-MCM3 | P1.h | RLFBminichromosome maintenance complex component 36p12CV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
GSMA_IIE
Network
Ascano FMRP targets
28978TMEM14AC6orf73 | PTD011transmembrane protein 14A6p12.2CV:PGCnp
GSMA_IIE
896CCND3-cyclin D36p21CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIE
Network
6722SRFMCM1serum response factor6p21.1CV:PGCnp
DMG:Nishioka_2013
GSMA_IIE
PMID:cooccur
5467PPARDFAAR | NR1C2 | NUC1 | NUCI | NUCII | PPARBperoxisome proliferator activated receptor delta6p21.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIE
PMID:cooccur
3113HLA-DPA1DP(W3) | DP(W4) | HLA-DP1A | HLADP | HLASB | PLT1major histocompatibility complex, class II, DP alpha 16p21.3CV:PGCnp
GSMA_I
PMID:cooccur
3833KIFC1HSET | KNSL2kinesin family member C16p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Ascano FMRP targets
57819LSM2C6orf28 | G7B | YBL026W | snRNPLSM2 homolog, U6 small nuclear RNA and mRNA degradation associated6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
10554AGPAT11-AGPAT1 | G15 | LPAAT-alpha | LPAATA1-acylglycerol-3-phosphate O-acyltransferase 16p21.3CV:PGCnp
GSMA_I
5698PSMB9LMP2 | PSMB6i | RING12 | beta1iproteasome subunit beta 96p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_I
1432MAPK14CSBP | CSBP1 | CSBP2 | CSPB1 | EXIP | Mxi2 | PRKM14 | PRKM15 | RK | SAPK2A | p38 | p38ALPHAmitogen-activated protein kinase 146p21.3-p21.2CV:PGCnp
GSMA_I
GSMA_IIE
Network
PMID:cooccur
10919EHMT2BAT8 | C6orf30 | G9A | GAT8 | KMT1C | NG36euchromatic histone-lysine N-methyltransferase 26p21.31CV:PGCnp
DMG:vanEijk_2014
DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Chromatin Remodeling Genes
203068TUBBCDCBM6 | CSCSC1 | M40 | OK/SW-cl.56 | TUBB1 | TUBB5tubulin beta class I6p21.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_I
Network
STRUCTURAL PLASTICITY
7915ALDH5A1SSADH | SSDHaldehyde dehydrogenase 5 family member A16p22CV:PGCnp
DNM:Fromer_2014
GO_Annotation
GSMA_I
PMID:cooccur
CompositeSet
55856ACOT13HT012 | PNAS-27 | THEM2acyl-CoA thioesterase 136p22.3CV:PGCnp
GSMA_I
1906EDN1ARCND3 | ET1 | HDLCQ7 | PPET1 | QMEendothelin 16p24.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_I
PMID:cooccur
51020HDDC2C6orf74 | CGI-130 | NS5ATP2 | dJ167O5.2HD domain containing 26q13-q24.3CV:PGCnp
DMG:Wockner_2014
262AMD1ADOMETDC | AMD | SAMDCadenosylmethionine decarboxylase 16q21CV:PGCnp
DMG:Wockner_2014
4217MAP3K5ASK1 | MAPKKK5 | MEKK5mitogen-activated protein kinase kinase kinase 56q22.33CV:PGCnp
DMG:Jaffe_2016
Network
Ascano FMRP targets
9589WTAPMum2Wilms tumor 1 associated protein6q25-q27CV:PGCnp
26271FBXO5EMI1 | FBX5 | Fbxo31F-box protein 56q25.2CV:GWASdb
CV:PGCnp
4191MDH2M-MDH | MDH | MGC:3559 | MOR1malate dehydrogenase 27cen-q22CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
10643IGF2BP3CT98 | IMP-3 | IMP3 | KOC | KOC1 | VICKZ3insulin like growth factor 2 mRNA binding protein 37p11CV:PGCnp
DMG:Jaffe_2016
81552VOPP1ECOP | GASPvesicular, overexpressed in cancer, prosurvival protein 17p11.2CV:PGCnp
DEG:Maycox_2009
64759TNS3TEM6 | TENS1tensin 37p12.3CV:PGCnpCompositeSet
Darnell FMRP targets
27434POLMPol Mu | Tdt-Npolymerase (DNA) mu7p13CV:PGCnp
DMG:Jaffe_2016
989SEPT7CDC10 | CDC3 | NBLA02942 | SEPT7Aseptin 77p14.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
PROTEIN CLUSTERING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
23333DPY19L1-dpy-19 like 1 (C. elegans)7p14.2CV:PGCnp
26031OSBPL3ORP-3 | ORP3 | OSBP3oxysterol binding protein like 37p15CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3205HOXA9ABD-B | HOX1 | HOX1.7 | HOX1Ghomeobox A97p15.2DMG:Wockner_2014
3206HOXA10HOX1 | HOX1.8 | HOX1H | PLhomeobox A107p15.2DMG:Jaffe_2016
3198HOXA1BSAS | HOX1 | HOX1Fhomeobox A17p15.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
4521NUDT1MTH1nudix hydrolase 17p22CV:PGCnp
LK:YES
55146ZDHHC4ZNF374zinc finger DHHC-type containing 47p22.1CV:PGCnp
Expression
80028FBXL18Fbl18F-box and leucine-rich repeat protein 187p22.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
8321FZD1-frizzled class receptor 17q21CV:PGCnp
DMG:Nishioka_2013
10926DBF4ASK | CHIF | DBF4A | ZDBF1DBF4 zinc finger7q21.3CV:PGCnp
Network
5445PON2-paraoxonase 27q21.3CV:GWASdb
CV:PGCnp
1174AP1S1AP19 | CLAPS1 | EKV3 | MEDNIK | SIGMA1Aadaptor related protein complex 1 sigma 1 subunit7q22.1CV:PGCnpCompositeSet
5054SERPINE1PAI | PAI-1 | PAI1 | PLANH1serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 17q22.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
858CAV2CAVcaveolin 27q31.1CV:GWASdb
CV:PGCnp
Network
PMID:cooccur
29969MDFICHICMyoD family inhibitor domain containing7q31.1-q31.2CV:PGCnp
PMID:cooccur
800CALD1CDM | H-CAD | HCAD | L-CAD | LCAD | NAG22caldesmon 17q33CV:PGCnp
DMG:Wockner_2014
Expression
Network
5799PTPRN2IA-2beta | IAR | ICAAR | PTPRP | R-PTP-N2protein tyrosine phosphatase, receptor type N27q36CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
TYROSINE KINASE SIGNALING
CompositeSet
Darnell FMRP targets
1020CDK5LIS7 | PSSALREcyclin-dependent kinase 57q36CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
54480CHPF2CSGLCA-T | CSGlcAT | ChSy-3 | chPF-2chondroitin polymerizing factor 27q36.1CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
155066ATP6V0E2ATP6V0E2L | C7orf32ATPase H+ transporting V0 subunit e27q36.1CV:PGCnp
DMG:Jaffe_2016
10947AP3M2AP47B | CLA20 | P47Badaptor related protein complex 3 mu 2 subunit8p11.2CV:PGCnp
DMG:Jaffe_2016
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
55756INTS9CPSF2L | INT9 | RC74integrator complex subunit 98p21.1CV:GWASdb
CV:PGCnp
GSMA_IIA
GSMA_IIE
85002FAM86B1-family with sequence similarity 86 member B18p23.1DMG:Wockner_2014
23212RRS1-ribosome biogenesis regulator homolog8q13.1CV:PGCnp
2167FABP4A-FABP | AFABP | ALBP | HEL-S-104 | aP2fatty acid binding protein 48q21DNM:Fromer_2014
PMID:cooccur
CompositeSet
79776ZFHX4ZFH4 | ZHF4zinc finger homeobox 48q21.11CV:PGCnp
9791PTDSS1LMHD | PSS1 | PSSAphosphatidylserine synthase 18q22CV:PGCnp
6383SDC2CD362 | HSPG | HSPG1 | SYND2syndecan 28q22-q23CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
25788RAD54BRDH54RAD54 homolog B (S. cerevisiae)8q22.1CV:PGCnp
DMG:Nishioka_2013
9166EBAG9EB9 | PDAFestrogen receptor binding site associated, antigen, 98q23CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
64798DEPTORDEP.6 | DEPDC6DEP domain containing MTOR-interacting protein8q24.12CV:PGCnp
DMG:Jaffe_2016
65263PYCRLPYCR3pyrroline-5-carboxylate reductase-like8q24.3CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
54512EXOSC4RRP41 | RRP41A | Rrp41p | SKI6 | Ski6p | hRrp41p | p12Aexosome component 48q24.3DMG:Wockner_2014
Expression
8629JRKJH8 | jerkyJrk helix-turn-helix protein8q24.3CV:PGCnp
219ALDH1B1ALDH5 | ALDHXaldehyde dehydrogenase 1 family member B19p11.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
84720PIGOHPMRS2phosphatidylinositol glycan anchor biosynthesis class O9p13.3CV:PGCnp
DMG:Nishioka_2013
79956ERMP1FXNA | KIAA1815 | bA207C16.3endoplasmic reticulum metallopeptidase 19p24CV:PGCnp
DMG:Jaffe_2016
26953RANBP6-RAN binding protein 69p24.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
55071C9orf40-chromosome 9 open reading frame 409q21.13CV:PGCnp
DMG:Nishioka_2013
7091TLE4BCE-1 | BCE1 | E(spI) | ESG | ESG4 | GRG4 | Grg-4transducin like enhancer of split 49q21.31CV:PGCnp
DMG:Jaffe_2016
9568GABBR2GABABR2 | GPR51 | GPRC3B | HG20 | HRIHFB2099gamma-aminobutyric acid type B receptor subunit 29q22.1-q22.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
LIGAND GATED ION SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Potential synaptic genes
7507XPAXP1 | XPACxeroderma pigmentosum, complementation group A9q22.3CV:PGCnp
DMG:Jaffe_2016
9830TRIM14-tripartite motif containing 149q22.33CV:PGCnp
DMG:Wockner_2014
55357TBC1D2PARIS-1 | PARIS1 | TBC1D2ATBC1 domain family member 29q22.33CV:PGCnp
PMID:cooccur
7099TLR4ARMD10 | CD284 | TLR-4 | TOLLtoll like receptor 49q33.1CV:PGCnp
PMID:cooccur
2021ENDOG-endonuclease G9q34.1CV:PGCnpG2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
203AK1HTL-S-58jadenylate kinase 19q34.1CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6837MED22MED24 | SURF5 | surf-5mediator complex subunit 229q34.2CV:PGCnp
10682EBPCDPX2 | CHO2 | CPX | CPXD | MENDemopamil binding protein (sterol isomerase)Xp11.23-p11.22CV:PGCnp
PMID:cooccur
286527TMSB15BTbeta15bthymosin beta 15BXq22.2CV:PGCnp
4204MECP2AUTSX3 | MRX16 | MRX79 | MRXS13 | MRXSL | PPMX | RS | RTS | RTTmethyl-CpG binding protein 2Xq28CV:GWASdb
CV:PGCnp
DNM:McCarthy_2014
PMID:cooccur
Chromatin Remodeling Genes