Gene Page: VPS52

Summary
GeneID  6293
Symbol  VPS52
Synonyms  ARE1|DKFZp547I194|RP5-1033B10|SAC2|SACM2L|dJ1033B10.5
Description  vacuolar protein sorting 52 homolog (S. cerevisiae)
See related  HGNC:10518|MIM:603443|Ensembl:ENSG00000112478|HPRD:09142|
Locus tag  DADB-91M20.1
Gene type  protein-coding
Map location  6p21.3
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.033 
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]Click to show detail
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
DAAM10.930.96
TDG0.920.94
RSG170.920.94
HMGCR0.920.96
ANKRD500.910.95
LPHN30.910.92
C6orf1740.900.95
B4GALT50.900.95
PANX10.900.95
BIVM0.900.94
Top 10 negatively co-expressed genes
AIFM3-0.70-0.78
TSC22D4-0.70-0.82
HLA-F-0.70-0.79
HEPN1-0.69-0.77
S100B-0.69-0.83
AF347015.31-0.68-0.86
FXYD1-0.68-0.86
HSD17B14-0.68-0.79
MT-CO2-0.68-0.88
AF347015.33-0.67-0.85
Gene Ontology
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0015031protein transportIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005794Golgi apparatusIEA-
GO:0005768endosomeIEA-
GO:0016020membraneIEA-
GO:0010008endosome membraneIEA-
 
Pathway annotation
Pathway namePathway size# SZGR genes in pathwayInfo
BOGNI_TREATMENT_RELATED_MYELOID_LEUKEMIA_DN 3319All SZGR genes in this pathway
VANHARANTA_UTERINE_FIBROID_WITH_7Q_DELETION_DN 3623All SZGR genes in this pathway
BENPORATH_NANOG_TARGETS 988594All SZGR genes in this pathway
BENPORATH_OCT4_TARGETS 290172All SZGR genes in this pathway
BENPORATH_SOX2_TARGETS 734436All SZGR genes in this pathway
BENPORATH_NOS_TARGETS 179105All SZGR genes in this pathway
BENPORATH_MYC_MAX_TARGETS 775494All SZGR genes in this pathway
PETRETTO_HEART_MASS_QTL_CIS_UP 2815All SZGR genes in this pathway
BYSTRYKH_HEMATOPOIESIS_STEM_CELL_QTL_CIS 12877All SZGR genes in this pathway
CHESLER_BRAIN_QTL_CIS 7551All SZGR genes in this pathway
BYSTRYKH_HEMATOPOIESIS_STEM_CELL_AND_BRAIN_QTL_CIS 6538All SZGR genes in this pathway
CHESLER_BRAIN_HIGHEST_GENETIC_VARIANCE 3721All SZGR genes in this pathway
JISON_SICKLE_CELL_DISEASE_DN 18197All SZGR genes in this pathway
DANG_BOUND_BY_MYC 1103714All SZGR genes in this pathway
KIM_ALL_DISORDERS_OLIGODENDROCYTE_NUMBER_CORR_UP 756494All SZGR genes in this pathway
KIM_BIPOLAR_DISORDER_OLIGODENDROCYTE_DENSITY_CORR_UP 682440All SZGR genes in this pathway
FIGUEROA_AML_METHYLATION_CLUSTER_1_DN 4830All SZGR genes in this pathway
FEVR_CTNNB1_TARGETS_UP 682433All SZGR genes in this pathway
VANOEVELEN_MYOGENESIS_SIN3A_TARGETS 220133All SZGR genes in this pathway


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