Search results: The pahtway p2597 has 128 genes in the original annotation. Currently, there are 77 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
84640USP38HP43.8KDubiquitin specific peptidase 38-CV:PGCnp
DMG:vanEijk_2014
84896ATAD1AFDC1 | FNP001 | THORASEATPase family, AAA domain containing 110q23.31CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
5954RCN1HEL-S-84 | PIG20 | RCAL | RCNreticulocalbin 111p13CV:PGCnp
406ARNTLBMAL1 | BMAL1c | JAP3 | MOP3 | PASD3 | TIC | bHLHe5aryl hydrocarbon receptor nuclear translocator like11p15CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
2012EMP1CL-20 | EMP-1 | TMPepithelial membrane protein 112p12.3CV:PGCnp
DMG:Wockner_2014
55766H2AFJH2AJH2A histone family member J12p12.3CV:PGCnp
Expression
894CCND2KIAK0002 | MPPH3cyclin D212p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
7103TSPAN8CO-029 | TM4SF3tetraspanin 812q21.1CV:PGCnp
PMID:cooccur
53981CPSF2CPSF100cleavage and polyadenylation specific factor 214q31.1CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
145567TTC7BTTC7L1 | c14_5685tetratricopeptide repeat domain 7B14q32.11CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9556C14orf2MP68 | PLPMchromosome 14 open reading frame 214q32.33CV:PGCnp
55505NOP10DKCB1 | NOLA3 | NOP10PNOP10 ribonucleoprotein15q14-q15CV:PGCnp
27229TUBGCP476P | GCP-4 | GCP4 | Grip76 | MCCRP3tubulin gamma complex associated protein 415q15CV:PGCnp
4644MYO5AGS1 | MYH12 | MYO5 | MYR12myosin VA15q21CV:GWASdb
CV:PGCnp
GO_Annotation
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
2628GATMAGAT | AT | CCDS3glycine amidinotransferase15q21.1DMG:Wockner_2014
3067HDC-histidine decarboxylase15q21.2CV:PGCnp
PMID:cooccur
80213TM2D3BLP2TM2 domain containing 315q26.3CV:PGCnp
55623THUMPD1Tan1THUMP domain containing 116p12.3CV:PGCnp
GSMA_IIE
23042PDXDC1LP8165pyridoxal-dependent decarboxylase domain containing 116p13.11CV:PGCnp
GSMA_IIE
Ascano FMRP targets
23274CLEC16AGop-1 | KIAA0350C-type lectin domain family 16 member A16p13.13CV:PGCnp
DNM:Fromer_2014
CompositeSet
Darnell FMRP targets
5694PSMB6DELTA | LMPY | Yproteasome subunit beta 617p13CV:PGCnp
DMG:Nishioka_2013
Expression
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
79893GGNBP2DIF-3 | DIF3 | LCRG1 | LZK1 | ZFP403 | ZNF403gametogenetin binding protein 217q12CNV:YES
CV:PGCnp
Ascano FMRP targets
5469MED1CRSP1 | CRSP200 | DRIP205 | DRIP230 | PBP | PPARBP | PPARGBP | RB18A | TRAP220 | TRIP2mediator complex subunit 117q12CV:PGCnp
140735DYNLL2DNCL1B | Dlc2 | RSPH22dynein light chain LC8-type 217q22CV:PGCnp
PMID:cooccur
INTRACELLULAR TRAFFICKING
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
4353MPO-myeloperoxidase17q23.1CV:PGCnp
PMID:cooccur
84617TUBB6HsT1601 | TUBB-5tubulin beta 6 class V18p11.21CV:PGCnp
DMG:Wockner_2014
G2Cdb.human_TAP-PSD-95-CORE
54815GATAD2Ap66alphaGATA zinc finger domain containing 2A19p13.11CV:GWAScat
CV:GWASdb
CV:PGC128
CV:PGCnp
CV:Ripke_2013
DMG:Wockner_2014
LK:YES
7001PRDX2HEL-S-2a | NKEF-B | NKEFB | PRP | PRX2 | PRXII | PTX1 | TDPX1 | TPX1 | TSAperoxiredoxin 219p13.2CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
2821GPIAMF | GNPI | NLK | PGI | PHI | SA-36 | SA36glucose-6-phosphate isomerase19q13.1CV:PGCnp
PMID:cooccur
CompositeSet
1155TBCBCG22 | CKAP1 | CKAPItubulin folding cofactor B19q13.11-q13.12CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
5792PTPRFBNAH2 | LARprotein tyrosine phosphatase, receptor type F1p34CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
1650DDOSTAGER1 | CDG1R | OKSWcl45 | OST | OST48 | WBP1dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit1p36.1DMG:Wockner_2014
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
6924TCEB3EloA | SIII | SIII p110 | TCEB3Atranscription elongation factor B subunit 31p36.1CV:PGCnp
DMG:Jaffe_2016
11240PADI2PAD-H19 | PAD2 | PDI2peptidyl arginine deiminase, type II1p36.13CV:PGCnp
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
55707NECAP2-NECAP endocytosis associated 21p36.13CV:PGCnp
23569PADI4PAD | PAD4 | PADI5 | PDI4 | PDI5peptidyl arginine deiminase, type IV1p36.13CV:GWASdb
CV:PGCnp
PMID:cooccur
57085AGTRAPATRAPangiotensin II receptor associated protein1p36.22CV:GWAScat
CV:GWASdb
CV:PGCnp
2782GNB1-G protein subunit beta 11p36.33CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Network
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
55600ITLN1HL-1 | HL1 | INTL | ITLN | LFR | hIntL | omentinintelectin 11q21.3CV:PGCnp
CV:PheWAS
GO_Annotation
GSMA_I
GSMA_IIA
2153F5FVL | PCCF | RPRGL1 | THPH2coagulation factor V1q23CV:PGCnp
PMID:cooccur
223ALDH9A1ALDH4 | ALDH7 | ALDH9 | E3 | TMABADHaldehyde dehydrogenase 9 family member A11q23.1CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
8674VAMP4VAMP-4 | VAMP24vesicle associated membrane protein 41q24-q25CV:GWASdb
CV:PGCnp
DEG:Sanders_2013
EXOCYTOSIS
54499TMCO1HP10122 | PCIA3 | PNAS-136 | TMCC4transmembrane and coiled-coil domains 11q24.1CV:PGCnp
PMID:cooccur
80896NPLC112 | C1orf13 | NAL | NPL1N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)1q25CV:GWASdb
CV:PGCnp
PMID:cooccur
9877ZC3H11AZC3HDC11Azinc finger CCCH-type containing 11A1q32.1CV:PGCnp
DMG:Wockner_2014
6726SRP9ALURBPsignal recognition particle 9kDa1q42.12CV:PGCnp
DMG:Nishioka_2013
1471CST3ARMD11 | HEL-S-2cystatin C20p11.21Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
CompositeSet
6629SNRPB2Msl1small nuclear ribonucleoprotein polypeptide B20p12.1CV:PGCnp
DMG:Wockner_2014
GSMA_I
9139CBFA2T2EHT | MTGR1 | ZMYND3 | p85core-binding factor, runt domain, alpha subunit 2; translocated to, 220q11CV:PGCnp
DEG:Zhao_2015
DMG:Wockner_2014
873CBR1CBR | SDR21C1 | hCBR1carbonyl reductase 121q22.13DEG:Zhao_2015
Network
CompositeSet
861RUNX1AML1 | AML1-EVI-1 | AMLCR1 | CBF2alpha | CBFA2 | EVI-1 | PEBP2aB | PEBP2alpharunt related transcription factor 121q22.3CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
51318MRPL35L35mt | MRP-L35mitochondrial ribosomal protein L352p11.2CV:PGCnp
Expression
GSMA_I
4528MTIF2-mitochondrial translational initiation factor 22p16.1CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
1622DBIACBD1 | ACBP | CCK-RP | EPdiazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)2q12-q21CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GR_Ng
GSMA_I
GSMA_IIA
PMID:cooccur
CELL METABOLISM
729230CCR2CC-CKR-2 | CCR-2 | CCR2A | CCR2B | CD192 | CKR2 | CKR2A | CKR2B | CMKBR2 | MCP-1-RC-C motif chemokine receptor 23p21.31CV:PGCnp
PMID:cooccur
59345GNB4CMTD1FG protein subunit beta 43q26.33CV:PGCnp
PMID:cooccur
CANABINOID
DOPAMINE
G-PROTEIN RELAY
METABOTROPIC GLUTAMATE RECEPTOR
SEROTONIN
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
G2Cdb.humanPSP
CompositeSet
54965PIGXPIG-Xphosphatidylinositol glycan anchor biosynthesis class X3q29CNV:YES
CV:PGCnp
174AFPAFPD | FETA | HPAFPalpha fetoprotein4q13.3CV:PGCnp
PMID:cooccur
5308PITX2ARP1 | Brx1 | IDG2 | IGDS | IGDS2 | IHG2 | IRID2 | Otlx2 | PTX2 | RGS | RIEG | RIEG1 | RSpaired like homeodomain 24q25CV:PGCnp
PMID:cooccur
60592SCOCHRIHFB2072 | SCOCO | UNC-69short coiled-coil protein4q31.1CV:PGCnp
DMG:Jaffe_2016
Network
3035HARSCMT2W | HRS | USH3Bhistidyl-tRNA synthetase5q31.3CV:PGCnp
GSMA_I
PMID:cooccur
Ascano FMRP targets
4439MSH5G7 | MUTSH5 | NG23mutS homolog 56p21.3CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
4800NFYACBF-A | CBF-B | HAP2 | NF-YAnuclear transcription factor Y subunit alpha6p21.3CV:GWASdb
DMG:Jaffe_2016
GSMA_I
GSMA_IIE
3122HLA-DRAHLA-DRA1 | MLRWmajor histocompatibility complex, class II, DR alpha6p21.3CV:GWASdb
CV:PGCnp
CV:Ripke_2013
GSMA_I
PMID:cooccur
10211FLOT1-flotillin 16p21.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
6293VPS52ARE1 | SAC2 | SACM2L | dJ1033B10.5VPS52, GARP complex subunit6p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GSMA_I
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
2739GLO1GLOD1 | GLYI | HEL-S-74glyoxalase I6p21.3-p21.1CV:PGCnp
DEG:Sanders_2013
GSMA_I
GSMA_IIE
PMID:cooccur
CELL METABOLISM
5445PON2-paraoxonase 27q21.3CV:GWASdb
CV:PGCnp
93408MYL10MYLC2PL | PLRLCmyosin light chain 107q22.1CV:PGCnp
DMG:Wockner_2014
1523CUX1CASP | CDP | CDP/Cut | CDP1 | COY1 | CUTL1 | CUX | Clox | Cux/CDP | GOLIM6 | Nbla10317 | p100 | p110 | p200 | p75cut like homeobox 17q22.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
51667NUB1BS4 | NUB1L | NYREN18negative regulator of ubiquitin-like proteins 17q36CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
10671DCTN6WS-3 | WS3 | p27dynactin subunit 68p12DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
526ATP6V1B2ATP6B1B2 | ATP6B2 | HO57 | VATB | VPP3 | Vma2ATPase H+ transporting V1 subunit B28p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
66036MTMR9C8orf9 | LIP-STYX | MTMR8myotubularin related protein 98p23-p22CV:GWAScat
CV:PGCnp
8836GGHGHgamma-glutamyl hydrolase8q12.3CV:PGCnp
DMG:Jaffe_2016
3563IL3RACD123 | IL3R | IL3RAY | IL3RX | IL3RY | hIL-3Rainterleukin 3 receptor subunit alphaXp22.3 or Yp11.3Association
PMID:cooccur
10838ZNF275-zinc finger protein 275Xq28CV:PGCnp
DMG:vanEijk_2014