Gene Page: TMED1

Summary
GeneID  11018
Symbol  TMED1
Synonyms  IL1RL1LG|Il1rl1l|MGC1270|ST2L
Description  transmembrane emp24 protein transport domain containing 1
See related  HGNC:17291|MIM:605395|Ensembl:ENSG00000099203|HPRD:05653|
Locus tag  -
Gene type  protein-coding
Map location  19p13.2
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 1 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
MFHAS10.930.89
TIAM20.920.88
RP1-21O18.10.910.89
MED13L0.910.89
AFF30.910.90
EML10.910.87
GRIK30.910.85
BACH20.900.84
CELSR30.900.88
SEZ60.900.87
Top 10 negatively co-expressed genes
SERPINB6-0.65-0.72
HSD17B14-0.59-0.74
AF347015.31-0.58-0.79
BDH2-0.58-0.74
C5orf53-0.57-0.67
S100B-0.57-0.77
MGST2-0.57-0.70
AIFM3-0.57-0.69
S100A16-0.57-0.76
MT-CO2-0.57-0.79
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005102receptor bindingTASNeurotransmitter (GO term level: 4)8621446 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0007267cell-cell signalingTAS8621446 
GO:0007165signal transductionTAS8621446 
GO:0006810transportIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0016021integral to membraneIEA-
GO:0005886plasma membraneIEA-
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
IL1RL1DER4 | FIT-1 | MGC32623 | ST2 | ST2L | ST2V | T1interleukin 1 receptor-like 1-HPRD,BioGRID8621446 
 
Pathway annotation
Pathway namePathway size# SZGR genes in pathwayInfo
LIU_SOX4_TARGETS_UP 13794All SZGR genes in this pathway
DACOSTA_UV_RESPONSE_VIA_ERCC3_UP 309199All SZGR genes in this pathway
PASQUALUCCI_LYMPHOMA_BY_GC_STAGE_UP 283177All SZGR genes in this pathway
HELLER_HDAC_TARGETS_DN 292189All SZGR genes in this pathway
GRADE_COLON_CANCER_UP 871505All SZGR genes in this pathway
MILI_PSEUDOPODIA_HAPTOTAXIS_DN 668419All SZGR genes in this pathway
JISON_SICKLE_CELL_DISEASE_UP 181106All SZGR genes in this pathway
KYNG_WERNER_SYNDROM_AND_NORMAL_AGING_DN 225124All SZGR genes in this pathway
VERHAAK_GLIOBLASTOMA_CLASSICAL 162122All SZGR genes in this pathway
PANGAS_TUMOR_SUPPRESSION_BY_SMAD1_AND_SMAD5_DN 157106All SZGR genes in this pathway
PURBEY_TARGETS_OF_CTBP1_AND_SATB1_DN 180116All SZGR genes in this pathway
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-124.1289295m8hsa-miR-124aUUAAGGCACGCGGUGAAUGCCA
miR-124/5062882951A,m8hsa-miR-506UAAGGCACCCUUCUGAGUAGA
hsa-miR-124brainUAAGGCACGCGGUGAAUGCC
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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