Gene Page: CHGA

Summary
GeneID  1113
Symbol  CHGA
Synonyms  CGA
Description  chromogranin A (parathyroid secretory protein 1)
See related  HGNC:1929|MIM:118910|Ensembl:ENSG00000100604|HPRD:07170|
Locus tag  -
Gene type  protein-coding
Map location  14q32
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
AssociationA combined odds ratio method (Sun et al. 2008), association studies3Link to SZGene
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]Click to show detail
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
MAP2K40.940.92
FAM179B0.940.91
FAM126B0.940.91
NCOA70.940.91
CLOCK0.930.91
COL4A3BP0.930.92
DPP80.930.89
ADAM220.920.90
SYT10.920.88
HOOK10.920.87
Top 10 negatively co-expressed genes
EFEMP2-0.48-0.50
RAB34-0.45-0.52
EIF4EBP3-0.43-0.49
C1orf61-0.43-0.58
GATSL3-0.42-0.44
DBI-0.42-0.49
NUDT8-0.41-0.45
RAB13-0.39-0.48
BCL7C-0.38-0.39
NKAIN4-0.38-0.47
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005509calcium ion bindingIEA-
GO:0005515protein bindingIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0008217regulation of blood pressureTAS8406464 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005576extracellular regionIEA-
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
PLGDKFZp779M0222plasminogen-HPRD,BioGRID11342539 
SCG3FLJ90833 | SGIIIsecretogranin III-HPRD12388744 
 
Pathway annotation
Pathway namePathway size# SZGR genes in pathwayInfo
BASAKI_YBX1_TARGETS_DN 384230All SZGR genes in this pathway
VECCHI_GASTRIC_CANCER_EARLY_DN 367220All SZGR genes in this pathway
LEE_NEURAL_CREST_STEM_CELL_UP 14699All SZGR genes in this pathway
SABATES_COLORECTAL_ADENOMA_DN 291176All SZGR genes in this pathway
CONCANNON_APOPTOSIS_BY_EPOXOMICIN_DN 172112All SZGR genes in this pathway
BARRIER_CANCER_RELAPSE_NORMAL_SAMPLE_UP 3221All SZGR genes in this pathway
WANG_BARRETTS_ESOPHAGUS_UP 5127All SZGR genes in this pathway
RORIE_TARGETS_OF_EWSR1_FLI1_FUSION_DN 3023All SZGR genes in this pathway
BLALOCK_ALZHEIMERS_DISEASE_DN 1237837All SZGR genes in this pathway
WANG_LSD1_TARGETS_DN 3930All SZGR genes in this pathway
AMUNDSON_GAMMA_RADIATION_RESISTANCE 2014All SZGR genes in this pathway
SMID_BREAST_CANCER_LUMINAL_B_UP 172109All SZGR genes in this pathway
BOCHKIS_FOXA2_TARGETS 425261All SZGR genes in this pathway
VART_KSHV_INFECTION_ANGIOGENIC_MARKERS_DN 13892All SZGR genes in this pathway
YOSHIMURA_MAPK8_TARGETS_DN 366257All SZGR genes in this pathway
MIKKELSEN_MEF_HCP_WITH_H3K27ME3 590403All SZGR genes in this pathway
HOFFMAN_CLOCK_TARGETS_DN 106All SZGR genes in this pathway
KIM_ALL_DISORDERS_CALB1_CORR_UP 548370All SZGR genes in this pathway
BRUINS_UVC_RESPONSE_VIA_TP53_GROUP_A 898516All SZGR genes in this pathway
ROLEF_GLIS3_TARGETS 3729All SZGR genes in this pathway


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