Gene Page: RAB3GAP2

Summary
GeneID  25782
Symbol  RAB3GAP2
Synonyms  DKFZp434D245|FLJ14579|KIAA0839|RAB3-GAP150|RAB3GAP150|p150
Description  RAB3 GTPase activating protein subunit 2 (non-catalytic)
See related  HGNC:17168|MIM:609275|Ensembl:ENSG00000118873|HPRD:11471|
Locus tag  RP11-568G11.1
Gene type  protein-coding
Map location  1q41
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
NetworkShortest path distance of core genes in the Human protein-protein interaction networkContribution to shortest path in PPI network: 0.2324 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
ARFGEF20.930.89
GLS0.930.86
FAM179B0.930.90
FAM126B0.920.91
PREPL0.920.89
NCOA70.920.89
DPP80.920.85
CHM0.920.89
SYNJ10.920.87
SYT10.910.90
Top 10 negatively co-expressed genes
EFEMP2-0.53-0.61
DBI-0.48-0.61
RAB34-0.48-0.61
RHOC-0.48-0.62
GATSL3-0.47-0.56
C1orf61-0.46-0.70
NKAIN4-0.45-0.57
EIF4EBP3-0.44-0.53
ACSF2-0.43-0.53
RAB13-0.42-0.55
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005096GTPase activator activityTAS9733780 
GO:0005515protein bindingIPI17353931 
GO:0046982protein heterodimerization activityISS-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006886intracellular protein transportTAS9733780 
GO:0043087regulation of GTPase activityISS-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005625soluble fractionISS-
GO:0005737cytoplasmIEA-
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
EXOSC6EAP4 | MTR3 | Mtr3p | hMtr3p | p11exosome component 6-HPRD15231747 
PTP4A3PRL-3 | PRL-R | PRL3protein tyrosine phosphatase type IVA, member 3Affinity Capture-MSBioGRID17353931 
RAB3GAP1DKFZp434A012 | KIAA0066 | P130 | RAB3GAP | RAB3GAP130 | WARBM1RAB3 GTPase activating protein subunit 1 (catalytic)-HPRD9733780 
 
Pathway annotation
Pathway namePathway size# SZGR genes in pathwayInfo
ZHOU_INFLAMMATORY_RESPONSE_LIVE_UP 485293All SZGR genes in this pathway
WANG_LMO4_TARGETS_UP 372227All SZGR genes in this pathway
OSWALD_HEMATOPOIETIC_STEM_CELL_IN_COLLAGEN_GEL_DN 275168All SZGR genes in this pathway
ODONNELL_TFRC_TARGETS_UP 456228All SZGR genes in this pathway
ZHOU_INFLAMMATORY_RESPONSE_FIMA_UP 544308All SZGR genes in this pathway
SCIBETTA_KDM5B_TARGETS_DN 8155All SZGR genes in this pathway
RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_DN 805505All SZGR genes in this pathway
RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_DN 537339All SZGR genes in this pathway
PATIL_LIVER_CANCER 747453All SZGR genes in this pathway
PUJANA_BRCA1_PCC_NETWORK 16521023All SZGR genes in this pathway
PUJANA_ATM_PCC_NETWORK 1442892All SZGR genes in this pathway
LIAO_METASTASIS 539324All SZGR genes in this pathway
BENPORATH_NANOG_TARGETS 988594All SZGR genes in this pathway
BENPORATH_SOX2_TARGETS 734436All SZGR genes in this pathway
BENPORATH_MYC_MAX_TARGETS 775494All SZGR genes in this pathway
CUI_TCF21_TARGETS_2_DN 830547All SZGR genes in this pathway
BROWNE_HCMV_INFECTION_14HR_DN 298200All SZGR genes in this pathway
ACEVEDO_NORMAL_TISSUE_ADJACENT_TO_LIVER_TUMOR_DN 354216All SZGR genes in this pathway
DANG_BOUND_BY_MYC 1103714All SZGR genes in this pathway
GABRIELY_MIR21_TARGETS 289187All SZGR genes in this pathway
PURBEY_TARGETS_OF_CTBP1_NOT_SATB1_UP 344215All SZGR genes in this pathway
GOBERT_OLIGODENDROCYTE_DIFFERENTIATION_DN 1080713All SZGR genes in this pathway
SMIRNOV_RESPONSE_TO_IR_2HR_DN 5535All SZGR genes in this pathway
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-369-3p757763m8hsa-miR-369-3pAAUAAUACAUGGUUGAUCUUU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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