|
|
| GeneID |
4010
|
| Symbol |
LMX1B
|
| Synonyms |
LMX1.2|MGC138325|MGC142051|NPS1
|
| Description |
LIM homeobox transcription factor 1, beta |
| See related |
HGNC:6654|MIM:602575|Ensembl:ENSG00000136944|HPRD:03986| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
9q34 |
|
| |
|
|
| Gene set name |
Method of gene set |
Evidence |
Info |
| GO_Annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 3 | |
|
| |
| General Gene Expression (microarray) ? |
|
 |
| |
| Gene Expression in Brain Regions (new) |
|
| |
| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| EP400 | 0.89 | 0.89 | | |
| ZZEF1 | 0.88 | 0.87 | | |
| SRCAP | 0.88 | 0.87 | | |
| WDR81 | 0.88 | 0.88 | | |
| KIAA0467 | 0.88 | 0.88 | | |
| EP300 | 0.88 | 0.88 | | |
| UBR4 | 0.88 | 0.85 | | |
| HERC2 | 0.87 | 0.86 | | |
| ZFYVE26 | 0.87 | 0.87 | | |
| HUWE1 | 0.87 | 0.86 | | |
Top 10 negatively co-expressed genes | | C1orf54 | -0.64 | -0.73 | | |
| GNG11 | -0.61 | -0.69 | | |
| AF347015.21 | -0.61 | -0.71 | | |
| ACOT13 | -0.60 | -0.59 | | |
| C5orf53 | -0.60 | -0.60 | | |
| GMFG | -0.60 | -0.67 | | |
| VAMP5 | -0.59 | -0.61 | | |
| SCRG1 | -0.59 | -0.62 | | |
| AF347015.31 | -0.59 | -0.63 | | |
| UQCRB | -0.59 | -0.61 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0003700 | transcription factor activity | IDA | | 10767331 |
| GO:0005515 | protein binding | IPI | | 12792813 |
| GO:0008270 | zinc ion binding | IEA | | - |
| GO:0046872 | metal ion binding | IEA | | - |
| GO:0043565 | sequence-specific DNA binding | IEA | | - |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0001764 | neuron migration | IEA | neuron (GO term level: 8) | - |
| GO:0030182 | neuron differentiation | ISS | neuron (GO term level: 8) | - |
| GO:0021954 | central nervous system neuron development | IEA | neuron (GO term level: 10) | - |
| GO:0001701 | in utero embryonic development | NAS | | 12792813 |
| GO:0006355 | regulation of transcription, DNA-dependent | IDA | | 10767331 |
| GO:0009953 | dorsal/ventral pattern formation | ISS | | - |
| GO:0007275 | multicellular organismal development | NAS | | 9590287 |9618165 |9837817
|
| GO:0030199 | collagen fibril organization | IEA | | - |
| GO:0043010 | camera-type eye development | IEA | | - |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005634 | nucleus | IDA | | 10767331 |
| |
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