Gene Page

Home
Datasets
Search
Analysis & Tools
Documents
About SZGR
Quick search: (e.g. 207 or AKT)

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

Release Site Map Support Contact us

Gene Page: NFKB1

Summary

GeneID

4790

Symbol

NFKB1

Synonyms

DKFZp686C01211|EBP-1|KBF1|MGC54151|NF-kappa-B|NFKB-p105|NFKB-p50|p105

Description

nuclear factor of kappa light polypeptide gene enhancer in B-cells 1

Locus tag

Gene type

protein-coding

Map location

4q24

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Network

Shortest path distance of core genes in the Human protein-protein interaction network

Contribution to shortest path in PPI network: 0.0798

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

OLIG1

0.82

0.89

OLIG2

0.81

0.86

SOX10

0.75

0.87

HEPACAM

0.71

0.81

ZCCHC24

0.71

0.81

NFATC1

0.70

0.67

CHAD

0.70

0.77

SLC12A4

0.69

0.63

PRR5L

0.69

0.65

CD82

0.68

0.72

Top 10 negatively co-expressed genes

STMN1

-0.45

-0.56

STMN2

-0.44

-0.55

MAPK8

-0.44

-0.52

POLB

-0.44

-0.59

ZNF551

-0.44

-0.52

ZNF286

-0.44

-0.49

PPP3CC

-0.43

-0.54

AC004017.1

-0.43

-0.50

MED19

-0.43

-0.56

FRG1

-0.43

-0.61

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0003700

transcription factor activity

TAS

10928981

GO:0005515

protein binding

IPI

8196632 |11526476 |14624448
|16108830 |16306601

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006355

regulation of transcription, DNA-dependent

IEA

GO:0006366

transcription from RNA polymerase II promoter

TAS

1992489

GO:0007165

signal transduction

IEA

GO:0006954

inflammatory response

TAS

1992489

GO:0006916

anti-apoptosis

TAS

10811897

GO:0006915

apoptosis

IEA

GO:0045941

positive regulation of transcription

NAS

8096091

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005829

cytosol

EXP

10723127

GO:0005634

nucleus

IDA

11819787

GO:0005654

nucleoplasm

EXP

10723127

GO:0005737

cytoplasm

IDA

11819787

Protein-protein Interactions

Shown by network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
AR	AIS \| DHTR \| HUMARA \| KD \| NR3C4 \| SBMA \| SMAX1 \| TFM	androgen receptor	-	HPRD	8798655
ATF3	-	activating transcription factor 3	-	HPRD	7692236
BCL3	BCL4 \| D19S37	B-cell CLL/lymphoma 3	p50 interacts with BCL-3. This interaction was modelled on a demonstrated interaction between p50 from an unspecified species and human BCL-3.	BIND	15469820
			-	HPRD	10362352
			Affinity Capture-Western Co-localization Co-purification Reconstituted Complex	BioGRID	8428580 \|10469655 \|14678988
			NFKB1 (p50) interacts with BCL3.	BIND	15829968
BIRC3	AIP1 \| API2 \| CIAP2 \| HAIP1 \| HIAP1 \| MALT2 \| MIHC \| RNF49	baculoviral IAP repeat-containing 3	The cIAP-2 promoter interacts with p50.	BIND	15494311
BRCA1	BRCAI \| BRCC1 \| IRIS \| PSCP \| RNF53	breast cancer 1, early onset	-	HPRD	12700228
BTRC	BETA-TRCP \| FBW1A \| FBXW1 \| FBXW1A \| FWD1 \| MGC4643 \| bTrCP \| bTrCP1 \| betaTrCP	beta-transducin repeat containing	Affinity Capture-Western	BioGRID	11158290
CD82	4F9 \| C33 \| GR15 \| IA4 \| KAI1 \| R2 \| SAR2 \| ST6 \| TSPAN27	CD82 molecule	NFKB1 (p50) interacts with the CD82 (KAI1) promoter.	BIND	15829968
CDK9	C-2k \| CDC2L4 \| CTK1 \| PITALRE \| TAK	cyclin-dependent kinase 9	-	HPRD	12173051
CEBPB	C/EBP-beta \| CRP2 \| IL6DBP \| LAP \| MGC32080 \| NF-IL6 \| TCF5	CCAAT/enhancer binding protein (C/EBP), beta	-	HPRD,BioGRID	1518839
CHUK	IKBKA \| IKK-alpha \| IKK1 \| IKKA \| NFKBIKA \| TCF16	conserved helix-loop-helix ubiquitous kinase	-	HPRD,BioGRID	10469655
COPB2	beta'-COP	coatomer protein complex, subunit beta 2 (beta prime)	Affinity Capture-MS	BioGRID	14743216
CTNNB1	CTNNB \| DKFZp686D02253 \| FLJ25606 \| FLJ37923	catenin (cadherin-associated protein), beta 1, 88kDa	NFKB1 (p50) interacts with CTNNB1 (beta-catenin).	BIND	15829968
DSP	DPI \| DPII	desmoplakin	-	HPRD	14743216
E2F1	E2F-1 \| RBAP1 \| RBBP3 \| RBP3	E2F transcription factor 1	Reconstituted Complex	BioGRID	9368006
ELF1	-	E74-like factor 1 (ets domain transcription factor)	-	HPRD,BioGRID	7862168
ELF3	EPR-1 \| ERT \| ESE-1 \| ESX	E74-like factor 3 (ets domain transcription factor, epithelial-specific )	-	HPRD,BioGRID	11036073
ETS1	ETS-1 \| EWSR2 \| FLJ10768	v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	-	HPRD	9094628
FOS	AP-1 \| C-FOS	v-fos FBJ murine osteosarcoma viral oncogene homolog	-	HPRD	9468519
G3BP2	-	GTPase activating protein (SH3 domain) binding protein 2	-	HPRD	10969074
GSK3B	-	glycogen synthase kinase 3 beta	-	HPRD,BioGRID	11425860
HDAC1	DKFZp686H12203 \| GON-10 \| HD1 \| RPD3 \| RPD3L1	histone deacetylase 1	-	HPRD,BioGRID	11931769
HMGA2	BABL \| HMGI-C \| HMGIC \| LIPO \| STQTL9	high mobility group AT-hook 2	-	HPRD,BioGRID	12693954
HMGB1	DKFZp686A04236 \| HMG1 \| HMG3 \| SBP-1	high-mobility group box 1	-	HPRD,BioGRID	12604365
HNRNPM	DKFZp547H118 \| HNRNPM4 \| HNRPM \| HNRPM4 \| HTGR1 \| NAGR1	heterogeneous nuclear ribonucleoprotein M	-	HPRD	14743216
HSPA8	HSC54 \| HSC70 \| HSC71 \| HSP71 \| HSP73 \| HSPA10 \| LAP1 \| MGC131511 \| MGC29929 \| NIP71	heat shock 70kDa protein 8	-	HPRD	14743216
IKBKB	FLJ40509 \| IKK-beta \| IKK2 \| IKKB \| MGC131801 \| NFKBIKB	inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	-	HPRD	10469655\|11158290
IKBKB	FLJ40509 \| IKK-beta \| IKK2 \| IKKB \| MGC131801 \| NFKBIKB		Affinity Capture-Western Biochemical Activity	BioGRID	10469655 \|11158290
IKBKG	AMCBX1 \| FIP-3 \| FIP3 \| Fip3p \| IKK-gamma \| IP \| IP1 \| IP2 \| IPD2 \| NEMO	inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma	Affinity Capture-MS	BioGRID	14743216
IL2RA	CD25 \| IDDM10 \| IL2R \| TCGFR	interleukin 2 receptor, alpha	in vitro in vivo	BioGRID	2497520
IL8	CXCL8 \| GCP-1 \| GCP1 \| LECT \| LUCT \| LYNAP \| MDNCF \| MONAP \| NAF \| NAP-1 \| NAP1	interleukin 8	The IL-8 promoter interacts with p50.	BIND	15494311
IRF1	IRF-1 \| MAR	interferon regulatory factor 1	-	HPRD	8746784
IRF2	DKFZp686F0244 \| IRF-2	interferon regulatory factor 2	-	HPRD,BioGRID	8550813
ITGB3BP	CENP-R \| CENPR \| HSU37139 \| NRIF3 \| TAP20	integrin beta 3 binding protein (beta3-endonexin)	-	HPRD,BioGRID	12244126
KAT5	ESA1 \| HTATIP \| HTATIP1 \| PLIP \| TIP \| TIP60 \| cPLA2	K(lysine) acetyltransferase 5	HTATIP (Tip60) interacts with NFKB1 (p50).	BIND	15829968
KLF5	BTEB2 \| CKLF \| IKLF	Kruppel-like factor 5 (intestinal)	-	HPRD,BioGRID	14573617
KPNA3	IPOA4 \| SRP1gamma \| SRP4 \| hSRP1	karyopherin alpha 3 (importin alpha 4)	Affinity Capture-MS	BioGRID	14743216
LYL1	bHLHa18	lymphoblastic leukemia derived sequence 1	in vitro in vivo Two-hybrid	BioGRID	10023675
MAP3K7IP2	FLJ21885 \| KIAA0733 \| TAB2	mitogen-activated protein kinase kinase kinase 7 interacting protein 2	Affinity Capture-Western Reconstituted Complex	BioGRID	12150997
MAP3K8	COT \| EST \| ESTF \| FLJ10486 \| TPL2 \| Tpl-2 \| c-COT	mitogen-activated protein kinase kinase kinase 8	-	HPRD,BioGRID	9950430
MEN1	MEAI \| SCG2	multiple endocrine neoplasia I	-	HPRD,BioGRID	11526476
MRCL3	MLCB \| MRLC3	myosin regulatory light chain MRCL3	-	HPRD	14743216
MTPN	FLJ31098 \| FLJ99857 \| GCDP \| V-1	myotrophin	-	HPRD,BioGRID	11971907
MYL6	ESMLC \| LC17-GI \| LC17-NM \| LC17A \| LC17B \| MLC1SM \| MLC3NM \| MLC3SM	myosin, light chain 6, alkali, smooth muscle and non-muscle	-	HPRD	14743216
NCF1C	SH3PXD1C	neutrophil cytosolic factor 1C pseudogene	-	HPRD	12618429
NCOA1	F-SRC-1 \| KAT13A \| MGC129719 \| MGC129720 \| NCoA-1 \| RIP160 \| SRC-1 \| SRC1 \| bHLHe42	nuclear receptor coactivator 1	SRC-1 interacts with p50. This interaction is modelled on a demonstrated interaction between human SRC-1 and p50 from an unspecified species.	BIND	9556555
NCOA1		nuclear receptor coactivator 1	-	HPRD,BioGRID	9556555
NCOA6	AIB3 \| ANTP \| ASC2 \| HOX1.1 \| HOXA7 \| KIAA0181 \| NRC \| PRIP \| RAP250 \| TRBP	nuclear receptor coactivator 6	Reconstituted Complex	BioGRID	10847592
NCOR1	KIAA1047 \| MGC104216 \| N-CoR \| TRAC1 \| hCIT529I10 \| hN-CoR	nuclear receptor co-repressor 1	Affinity Capture-Western	BioGRID	12150997
NCOR2	CTG26 \| SMRT \| SMRTE \| SMRTE-tau \| TNRC14 \| TRAC-1 \| TRAC1	nuclear receptor co-repressor 2	-	HPRD	10777532
NFKB1	DKFZp686C01211 \| EBP-1 \| KBF1 \| MGC54151 \| NF-kappa-B \| NFKB-p105 \| NFKB-p50 \| p105	nuclear factor of kappa light polypeptide gene enhancer in B-cells 1	Affinity Capture-MS Affinity Capture-Western Co-localization Reconstituted Complex	BioGRID	8428580 \|14743216
			NFKB1 (p50) forms a homodimer.	BIND	15735750
			p50 interacts with p50. This interaction was modelled on a demonstrated interaction between p50 and p50 both from an unspecified species.	BIND	9556555
NFKB2	LYT-10 \| LYT10	nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)	Affinity Capture-MS	BioGRID	14743216
NFKBIA	IKBA \| MAD-3 \| NFKBI	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	-	HPRD,BioGRID	9738011
NFKBIA	IKBA \| MAD-3 \| NFKBI		p50 associates with I-kappa-B-alpha.	BIND	9135156
NFKBIE	IKBE	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon	-	HPRD	9223487
NFKBIE	IKBE		Affinity Capture-Western Reconstituted Complex Two-hybrid	BioGRID	9315679
NFKBIZ	FLJ30225 \| FLJ34463 \| IKBZ \| INAP \| MAIL	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	Affinity Capture-Western	BioGRID	11356851
NKRF	ITBA4 \| NRF	NFKB repressing factor	Reconstituted Complex	BioGRID	10562553
NOTCH1	TAN1 \| hN1	Notch homolog 1, translocation-associated (Drosophila)	-	HPRD,BioGRID	8642313 \|11418662
NR3C1	GCCR \| GCR \| GR \| GRL	nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	-	HPRD,BioGRID	7823959 \|8290595
PARP1	ADPRT \| ADPRT1 \| PARP \| PARP-1 \| PPOL \| pADPRT-1	poly (ADP-ribose) polymerase 1	-	HPRD	11590148
PPP4C	PP4 \| PPH3 \| PPX	protein phosphatase 4 (formerly X), catalytic subunit	-	HPRD,BioGRID	9837938
REL	C-Rel	v-rel reticuloendotheliosis viral oncogene homolog (avian)	Affinity Capture-MS	BioGRID	14743216
RELA	MGC131774 \| NFKB3 \| p65	v-rel reticuloendotheliosis viral oncogene homolog A (avian)	Affinity Capture-MS Reconstituted Complex	BioGRID	8798655 \|14743216
			NFKB1 (p50) interacts with RELA (p65).	BIND	15735750
			p50 interacts with p65. This interaction was modeled on a demonstrated interaction between mouse p50 and mouse p65.	BIND	9738011
			-	HPRD	8649779
RELB	I-REL \| IREL	v-rel reticuloendotheliosis viral oncogene homolog B	Affinity Capture-MS	BioGRID	14743216
RSF1	HBXAP \| RSF-1 \| XAP8 \| p325	remodeling and spacing factor 1	-	HPRD,BioGRID	15242768
RUVBL2	CGI-46 \| ECP51 \| INO80J \| REPTIN \| RVB2 \| TIH2 \| TIP48 \| TIP49B	RuvB-like 2 (E. coli)	-	HPRD	14743216
RUVBL2		RuvB-like 2 (E. coli)	NFKB1 (p50) interacts with RUVBL2 (reptin).	BIND	15829968
RXRA	FLJ00280 \| FLJ00318 \| FLJ16020 \| FLJ16733 \| MGC102720 \| NR2B1	retinoid X receptor, alpha	-	HPRD,BioGRID	10075655
SP1	-	Sp1 transcription factor	Reconstituted Complex	BioGRID	7933095
SPAG9	FLJ13450 \| FLJ14006 \| FLJ26141 \| FLJ34602 \| HLC4 \| JLP \| KIAA0516 \| MGC117291 \| MGC14967 \| MGC74461 \| PHET \| PIG6	sperm associated antigen 9	-	HPRD,BioGRID	14743216
SPAG9		sperm associated antigen 9	NFKB1 (NF-kB1/p105) interacts with an unspecified isoform of SPAG9 (JLP).	BIND	14743216
SPI1	OF \| PU.1 \| SFPI1 \| SPI-1 \| SPI-A	spleen focus forming virus (SFFV) proviral integration oncogene spi1	-	HPRD	9094628
STAT3	APRF \| FLJ20882 \| HIES \| MGC16063	signal transducer and activator of transcription 3 (acute-phase response factor)	-	HPRD,BioGRID	12057007
STAT6	D12S1644 \| IL-4-STAT \| STAT6B \| STAT6C	signal transducer and activator of transcription 6, interleukin-4 induced	-	HPRD,BioGRID	9584180
TBK1	FLJ11330 \| NAK \| T2K	TANK-binding kinase 1	Affinity Capture-MS	BioGRID	14743216
TNFSF11	CD254 \| ODF \| OPGL \| OPTB2 \| RANKL \| TRANCE \| hRANKL2 \| sOdf	tumor necrosis factor (ligand) superfamily, member 11	-	HPRD	10635328
TNIP2	ABIN-2 \| ABIN2 \| FLIP1 \| KLIP \| MGC4289	TNFAIP3 interacting protein 2	-	HPRD,BioGRID	14743216 \|15169888
TNIP3	ABIN-3 \| FLJ21162 \| LIND	TNFAIP3 interacting protein 3	Affinity Capture-MS	BioGRID	14743216
TP53BP1	53BP1 \| FLJ41424 \| MGC138366 \| p202	tumor protein p53 binding protein 1	Affinity Capture-Western	BioGRID	10646849
TPR	-	translocated promoter region (to activated MET oncogene)	-	HPRD	14743216
TRIP4	HsT17391	thyroid hormone receptor interactor 4	-	HPRD	12077347
TSC22D3	DIP \| DKFZp313A1123 \| DSIPI \| GILZ \| TSC-22R \| hDIP	TSC22 domain family, member 3	-	HPRD,BioGRID	11468175
TUBA3C	TUBA2 \| bA408E5.3	tubulin, alpha 3c	-	HPRD	14743216
TUBB2B	DKFZp566F223 \| FLJ98847 \| MGC8685 \| TUBB-PARALOG \| bA506K6.1	tubulin, beta 2B	-	HPRD	14743216
TUBB6	HsT1601 \| MGC132410 \| MGC4083 \| TUBB-5	tubulin, beta 6	-	HPRD	14743216
TXN	DKFZp686B1993 \| MGC61975 \| TRX \| TRX1	thioredoxin	-	HPRD,BioGRID	7788295
UBE2K	DKFZp564C1216 \| DKFZp686J24237 \| E2-25K \| HIP2 \| HYPG \| LIG	ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	-	HPRD	9535861
UNC5CL	MGC34763 \| ZUD	unc-5 homolog C (C. elegans)-like	-	HPRD,BioGRID	14769797

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
KEGG_MAPK_SIGNALING_PATHWAY	267	205	All SZGR genes in this pathway
KEGG_CHEMOKINE_SIGNALING_PATHWAY	190	128	All SZGR genes in this pathway
KEGG_APOPTOSIS	88	62	All SZGR genes in this pathway
KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY	102	88	All SZGR genes in this pathway
KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY	62	47	All SZGR genes in this pathway
KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY	71	51	All SZGR genes in this pathway
KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY	56	44	All SZGR genes in this pathway
KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY	108	89	All SZGR genes in this pathway
KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY	75	56	All SZGR genes in this pathway
KEGG_NEUROTROPHIN_SIGNALING_PATHWAY	126	103	All SZGR genes in this pathway
KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY	67	57	All SZGR genes in this pathway
KEGG_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION	68	44	All SZGR genes in this pathway
KEGG_LEISHMANIA_INFECTION	72	56	All SZGR genes in this pathway
KEGG_PATHWAYS_IN_CANCER	328	259	All SZGR genes in this pathway
KEGG_PANCREATIC_CANCER	70	56	All SZGR genes in this pathway
KEGG_PROSTATE_CANCER	89	75	All SZGR genes in this pathway
KEGG_CHRONIC_MYELOID_LEUKEMIA	73	59	All SZGR genes in this pathway
KEGG_ACUTE_MYELOID_LEUKEMIA	60	47	All SZGR genes in this pathway
KEGG_SMALL_CELL_LUNG_CANCER	84	67	All SZGR genes in this pathway
BIOCARTA_RELA_PATHWAY	16	12	All SZGR genes in this pathway
BIOCARTA_AKT_PATHWAY	22	16	All SZGR genes in this pathway
BIOCARTA_ATM_PATHWAY	20	16	All SZGR genes in this pathway
BIOCARTA_RANKL_PATHWAY	14	13	All SZGR genes in this pathway
BIOCARTA_CDMAC_PATHWAY	16	15	All SZGR genes in this pathway
BIOCARTA_CD40_PATHWAY	15	13	All SZGR genes in this pathway
BIOCARTA_CERAMIDE_PATHWAY	22	16	All SZGR genes in this pathway
BIOCARTA_TID_PATHWAY	19	15	All SZGR genes in this pathway
BIOCARTA_GCR_PATHWAY	22	17	All SZGR genes in this pathway
BIOCARTA_CXCR4_PATHWAY	24	22	All SZGR genes in this pathway
BIOCARTA_RNA_PATHWAY	10	9	All SZGR genes in this pathway
BIOCARTA_EPONFKB_PATHWAY	11	11	All SZGR genes in this pathway
BIOCARTA_FMLP_PATHWAY	39	29	All SZGR genes in this pathway
BIOCARTA_FREE_PATHWAY	10	7	All SZGR genes in this pathway
BIOCARTA_HIVNEF_PATHWAY	58	43	All SZGR genes in this pathway
BIOCARTA_HCMV_PATHWAY	17	16	All SZGR genes in this pathway
BIOCARTA_GSK3_PATHWAY	27	26	All SZGR genes in this pathway
BIOCARTA_DEATH_PATHWAY	33	24	All SZGR genes in this pathway
BIOCARTA_RACCYCD_PATHWAY	26	23	All SZGR genes in this pathway
BIOCARTA_KERATINOCYTE_PATHWAY	46	38	All SZGR genes in this pathway
BIOCARTA_MAPK_PATHWAY	87	68	All SZGR genes in this pathway
BIOCARTA_VIP_PATHWAY	29	26	All SZGR genes in this pathway
BIOCARTA_NTHI_PATHWAY	24	20	All SZGR genes in this pathway
BIOCARTA_NFKB_PATHWAY	23	19	All SZGR genes in this pathway
BIOCARTA_RAS_PATHWAY	23	20	All SZGR genes in this pathway
BIOCARTA_CARDIACEGF_PATHWAY	18	16	All SZGR genes in this pathway
BIOCARTA_IL1R_PATHWAY	33	29	All SZGR genes in this pathway
BIOCARTA_TCR_PATHWAY	49	37	All SZGR genes in this pathway
BIOCARTA_TALL1_PATHWAY	15	15	All SZGR genes in this pathway
BIOCARTA_41BB_PATHWAY	17	15	All SZGR genes in this pathway
BIOCARTA_STRESS_PATHWAY	25	18	All SZGR genes in this pathway
BIOCARTA_TNFR2_PATHWAY	18	15	All SZGR genes in this pathway
BIOCARTA_TOLL_PATHWAY	37	31	All SZGR genes in this pathway
ST_TUMOR_NECROSIS_FACTOR_PATHWAY	29	20	All SZGR genes in this pathway
ST_ERK1_ERK2_MAPK_PATHWAY	32	25	All SZGR genes in this pathway
SIG_CD40PATHWAYMAP	34	28	All SZGR genes in this pathway
ST_P38_MAPK_PATHWAY	37	28	All SZGR genes in this pathway
ST_GAQ_PATHWAY	28	22	All SZGR genes in this pathway
ST_GA13_PATHWAY	37	32	All SZGR genes in this pathway
ST_T_CELL_SIGNAL_TRANSDUCTION	45	33	All SZGR genes in this pathway
ST_B_CELL_ANTIGEN_RECEPTOR	40	32	All SZGR genes in this pathway
ST_FAS_SIGNALING_PATHWAY	65	54	All SZGR genes in this pathway
PID_FCER1_PATHWAY	62	43	All SZGR genes in this pathway
PID_BCR_5PATHWAY	65	50	All SZGR genes in this pathway
PID_LYSOPHOSPHOLIPID_PATHWAY	66	53	All SZGR genes in this pathway
PID_NFKAPPAB_ATYPICAL_PATHWAY	17	15	All SZGR genes in this pathway
PID_NFKAPPAB_CANONICAL_PATHWAY	23	20	All SZGR genes in this pathway
PID_CD40_PATHWAY	31	26	All SZGR genes in this pathway
PID_IL12_2PATHWAY	63	54	All SZGR genes in this pathway
PID_AVB3_OPN_PATHWAY	31	29	All SZGR genes in this pathway
PID_ANGIOPOIETIN_RECEPTOR_PATHWAY	50	41	All SZGR genes in this pathway
PID_HDAC_CLASSI_PATHWAY	66	50	All SZGR genes in this pathway
PID_TELOMERASE_PATHWAY	68	48	All SZGR genes in this pathway
PID_IL1_PATHWAY	34	28	All SZGR genes in this pathway
PID_REG_GR_PATHWAY	82	60	All SZGR genes in this pathway
PID_TNF_PATHWAY	46	33	All SZGR genes in this pathway
PID_IL2_PI3K_PATHWAY	34	27	All SZGR genes in this pathway
PID_CERAMIDE_PATHWAY	48	37	All SZGR genes in this pathway
PID_AMB2_NEUTROPHILS_PATHWAY	41	32	All SZGR genes in this pathway
PID_IL23_PATHWAY	37	30	All SZGR genes in this pathway
PID_HIV_NEF_PATHWAY	35	26	All SZGR genes in this pathway
PID_EPO_PATHWAY	34	29	All SZGR genes in this pathway
WATANABE_RECTAL_CANCER_RADIOTHERAPY_RESPONSIVE_UP	108	67	All SZGR genes in this pathway
ZHOU_INFLAMMATORY_RESPONSE_LIVE_UP	485	293	All SZGR genes in this pathway
DIAZ_CHRONIC_MEYLOGENOUS_LEUKEMIA_UP	1382	904	All SZGR genes in this pathway
ZHOU_INFLAMMATORY_RESPONSE_FIMA_UP	544	308	All SZGR genes in this pathway
ZHOU_INFLAMMATORY_RESPONSE_LPS_UP	431	237	All SZGR genes in this pathway
KIM_WT1_TARGETS_UP	214	155	All SZGR genes in this pathway
KIM_WT1_TARGETS_12HR_DN	209	122	All SZGR genes in this pathway
GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN	1781	1082	All SZGR genes in this pathway
NUNODA_RESPONSE_TO_DASATINIB_IMATINIB_UP	29	20	All SZGR genes in this pathway
DACOSTA_UV_RESPONSE_VIA_ERCC3_XPCS_DN	88	71	All SZGR genes in this pathway
GILMORE_CORE_NFKB_PATHWAY	14	10	All SZGR genes in this pathway
SCHEIDEREIT_IKK_TARGETS	18	15	All SZGR genes in this pathway
LI_LUNG_CANCER	41	30	All SZGR genes in this pathway
DACOSTA_UV_RESPONSE_VIA_ERCC3_DN	855	609	All SZGR genes in this pathway
DIRMEIER_LMP1_RESPONSE_LATE_UP	57	41	All SZGR genes in this pathway
YAN_ESCAPE_FROM_ANOIKIS	24	19	All SZGR genes in this pathway
TSAI_RESPONSE_TO_IONIZING_RADIATION	149	101	All SZGR genes in this pathway
SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_DN	584	395	All SZGR genes in this pathway
PUJANA_ATM_PCC_NETWORK	1442	892	All SZGR genes in this pathway
SHIN_B_CELL_LYMPHOMA_CLUSTER_3	28	23	All SZGR genes in this pathway
ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND_TNF_UP	223	140	All SZGR genes in this pathway
MORI_PRE_BI_LYMPHOCYTE_DN	77	49	All SZGR genes in this pathway
BYSTRYKH_HEMATOPOIESIS_STEM_CELL_AND_BRAIN_QTL_TRANS	185	114	All SZGR genes in this pathway
SMITH_TERT_TARGETS_UP	145	91	All SZGR genes in this pathway
TARTE_PLASMA_CELL_VS_B_LYMPHOCYTE_DN	38	25	All SZGR genes in this pathway
BYSTROEM_CORRELATED_WITH_IL5_UP	51	30	All SZGR genes in this pathway
BYSTRYKH_HEMATOPOIESIS_STEM_CELL_QTL_TRANS	882	572	All SZGR genes in this pathway
MAGRANGEAS_MULTIPLE_MYELOMA_IGLL_VS_IGLK_UP	42	24	All SZGR genes in this pathway
GALINDO_IMMUNE_RESPONSE_TO_ENTEROTOXIN	85	67	All SZGR genes in this pathway
NEMETH_INFLAMMATORY_RESPONSE_LPS_UP	88	64	All SZGR genes in this pathway
ABRAHAM_ALPC_VS_MULTIPLE_MYELOMA_UP	26	22	All SZGR genes in this pathway
THEILGAARD_NEUTROPHIL_AT_SKIN_WOUND_UP	77	52	All SZGR genes in this pathway
RADMACHER_AML_PROGNOSIS	78	52	All SZGR genes in this pathway
IYENGAR_RESPONSE_TO_ADIPOCYTE_FACTORS	10	8	All SZGR genes in this pathway
NATSUME_RESPONSE_TO_INTERFERON_BETA_UP	71	49	All SZGR genes in this pathway
WEIGEL_OXIDATIVE_STRESS_RESPONSE	35	28	All SZGR genes in this pathway
ZHOU_TNF_SIGNALING_4HR	54	36	All SZGR genes in this pathway
HARRIS_HYPOXIA	81	64	All SZGR genes in this pathway
PAL_PRMT5_TARGETS_UP	203	135	All SZGR genes in this pathway
BLALOCK_ALZHEIMERS_DISEASE_UP	1691	1088	All SZGR genes in this pathway
KAYO_AGING_MUSCLE_DN	123	76	All SZGR genes in this pathway
ZHU_CMV_ALL_UP	120	89	All SZGR genes in this pathway
DAZARD_RESPONSE_TO_UV_NHEK_DN	318	220	All SZGR genes in this pathway
ZHU_CMV_24_HR_UP	93	65	All SZGR genes in this pathway
DAZARD_UV_RESPONSE_CLUSTER_G6	153	112	All SZGR genes in this pathway
MARSON_BOUND_BY_FOXP3_UNSTIMULATED	1229	713	All SZGR genes in this pathway
NIKOLSKY_OVERCONNECTED_IN_BREAST_CANCER	22	19	All SZGR genes in this pathway
FOSTER_TOLERANT_MACROPHAGE_DN	409	268	All SZGR genes in this pathway
ACEVEDO_NORMAL_TISSUE_ADJACENT_TO_LIVER_TUMOR_DN	354	216	All SZGR genes in this pathway
GAURNIER_PSMD4_TARGETS	73	55	All SZGR genes in this pathway
WINTER_HYPOXIA_METAGENE	242	168	All SZGR genes in this pathway
LINDSTEDT_DENDRITIC_CELL_MATURATION_B	53	36	All SZGR genes in this pathway
HINATA_NFKB_TARGETS_KERATINOCYTE_UP	91	63	All SZGR genes in this pathway
HINATA_NFKB_TARGETS_FIBROBLAST_UP	84	60	All SZGR genes in this pathway
COLINA_TARGETS_OF_4EBP1_AND_4EBP2	356	214	All SZGR genes in this pathway
YAGI_AML_WITH_T_8_21_TRANSLOCATION	368	247	All SZGR genes in this pathway
WORSCHECH_TUMOR_EVASION_AND_TOLEROGENICITY_UP	30	19	All SZGR genes in this pathway
DANG_BOUND_BY_MYC	1103	714	All SZGR genes in this pathway
TIAN_TNF_SIGNALING_VIA_NFKB	28	21	All SZGR genes in this pathway
LI_INDUCED_T_TO_NATURAL_KILLER_UP	307	182	All SZGR genes in this pathway
PILON_KLF1_TARGETS_DN	1972	1213	All SZGR genes in this pathway
KOINUMA_TARGETS_OF_SMAD2_OR_SMAD3	824	528	All SZGR genes in this pathway
PHONG_TNF_RESPONSE_NOT_VIA_P38	337	236	All SZGR genes in this pathway
ROESSLER_LIVER_CANCER_METASTASIS_UP	107	72	All SZGR genes in this pathway
ZWANG_CLASS_3_TRANSIENTLY_INDUCED_BY_EGF	222	159	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-30-3p	562	568	1A	hsa-miR-30a-3p	CUUUCAGUCGGAUGUUUGCAGC
miR-30-3p	562	568	1A	hsa-miR-30e-3p	CUUUCAGUCGGAUGUUUACAGC
miR-323	480	486	m8	hsa-miR-323^brain	GCACAUUACACGGUCGACCUCU
miR-9	29	35	m8	hsa-miR-9^SZ	UCUUUGGUUAUCUAGCUGUAUGA

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.