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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Gene Page: PCNA

Summary

GeneID

5111

Symbol

PCNA

Synonyms

MGC8367

Description

proliferating cell nuclear antigen

Locus tag

Gene type

protein-coding

Map location

20pter-p12

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Network

Shortest path distance of core genes in the Human protein-protein interaction network

Contribution to shortest path in PPI network: 0.0044

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

C1orf183

0.88

0.79

PITPNM2

0.86

0.75

KIAA1045

0.86

0.76

IQSEC2

0.85

0.79

PITPNM3

0.85

0.83

GARNL4

0.85

0.70

NOS2

0.85

0.74

TMEM132D

0.84

0.77

LRRK1

0.84

0.81

CTSB

0.84

0.74

Top 10 negatively co-expressed genes

BCL7C

-0.47

-0.61

HEBP2

-0.47

-0.66

RPS6

-0.46

-0.60

RPL23A

-0.45

-0.59

RPL18

-0.45

-0.62

RPS19P3

-0.45

-0.62

C9orf46

-0.45

-0.55

RPS3P3

-0.44

-0.57

RPL19P12

-0.44

-0.57

RPL32

-0.44

-0.57

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0003677

DNA binding

IEA

GO:0005515

protein binding

IPI

9305916 |15225546 |15358233

GO:0032405

MutLalpha complex binding

IDA

11005803

GO:0030337

DNA polymerase processivity factor activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006297

nucleotide-excision repair, DNA gap filling

EXP

9111189

GO:0006287

base-excision repair, gap-filling

IEA

GO:0006281

DNA repair

NAS

15504738

GO:0006275

regulation of DNA replication

IEA

GO:0008283

cell proliferation

TAS

2565339

GO:0048015

phosphoinositide-mediated signaling

NAS

15504738

GO:0006886

intracellular protein transport

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0000307

cyclin-dependent protein kinase holoenzyme complex

IEA

GO:0005634

nucleus

IEA

GO:0005652

nuclear lamina

IEA

GO:0005654

nucleoplasm

EXP

9822671 |11473323

GO:0005663

DNA replication factor C complex

TAS

2565339

GO:0043626

PCNA complex

IEA

Protein-protein Interactions

Shown by network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
ANXA2	ANX2 \| ANX2L4 \| CAL1H \| LIP2 \| LPC2 \| LPC2D \| P36 \| PAP-IV	annexin A2	-	HPRD,BioGRID	9228079 \|12171929
APEX1	APE \| APE-1 \| APE1 \| APEN \| APEX \| APX \| HAP1 \| REF-1 \| REF1	APEX nuclease (multifunctional DNA repair enzyme) 1	-	HPRD,BioGRID	11601988
APEX2	APE2 \| APEXL2 \| XTH2	APEX nuclease (apurinic/apyrimidinic endonuclease) 2	-	HPRD,BioGRID	11376153
APEX2	APE2 \| APEXL2 \| XTH2	APEX nuclease (apurinic/apyrimidinic endonuclease) 2	APE2 is a PCNA-binding protein	BIND	11376153
BAZ1B	WBSCR10 \| WBSCR9 \| WSTF	bromodomain adjacent to zinc finger domain, 1B	PCNA interacts with WSTF	BIND	15543136
CCNA2	CCN1 \| CCNA	cyclin A2	Affinity Capture-Western	BioGRID	12853968
CCNB1	CCNB	cyclin B1	-	HPRD,BioGRID	8101826
CCND1	BCL1 \| D11S287E \| PRAD1 \| U21B31	cyclin D1	Reconstituted Complex	BioGRID	7908906
CCND3	-	cyclin D3	-	HPRD,BioGRID	7908906
CCNO	CCNU \| FLJ22422 \| UDG2 \| UNG2	cyclin O	-	HPRD,BioGRID	10393198 \|12171929
CDC2	CDC28A \| CDK1 \| DKFZp686L20222 \| MGC111195	cell division cycle 2, G1 to S and G2 to M	-	HPRD	7949095
CDC25C	CDC25	cell division cycle 25 homolog C (S. pombe)	-	HPRD,BioGRID	11896603
CDC6	CDC18L \| HsCDC18 \| HsCDC6	cell division cycle 6 homolog (S. cerevisiae)	-	HPRD,BioGRID	9566895
CDK2	p33(CDK2)	cyclin-dependent kinase 2	-	HPRD,BioGRID	10930425
CDK4	CMM3 \| MGC14458 \| PSK-J3	cyclin-dependent kinase 4	Affinity Capture-Western	BioGRID	8259215
CDK5	PSSALRE	cyclin-dependent kinase 5	-	HPRD	7949095
CDK6	MGC59692 \| PLSTIRE \| STQTL11	cyclin-dependent kinase 6	-	HPRD	9667749
CDKN1A	CAP20 \| CDKN1 \| CIP1 \| MDA-6 \| P21 \| SDI1 \| WAF1 \| p21CIP1	cyclin-dependent kinase inhibitor 1A (p21, Cip1)	CDKN1A (p21) interacts with PCNA.	BIND	8662825
			p21WAF1 interacts with PCNA.	BIND	7780738
			PCNA interacts with p21.	BIND	9705499
			PCNA interacts with p21.	BIND	9178907
			p21 interacts with PCNA.	BIND	11302688
			PCNA interacts with p21.	BIND	8861969
			p21 interacts with PCNA.	BIND	9632134
			p21 interacts with PCNA. This interaction was modeled on a demonstrated interaction between human p21 and PCNA from an unspecified species.	BIND	9546435
			-	HPRD,BioGRID	8861913
			p21WAF1 interacts with PCNA. This interaction was modeled on a demonstrated interaction between human p21WAF1 and Pisum sativum v. Onward PCNA.	BIND	8647134
			p21 interacts with PCNA. This interaction was modeled on a demonstrated interaction between human p21 and hamster PCNA.	BIND	9467962
CDKN1C	BWCR \| BWS \| KIP2 \| WBS \| p57	cyclin-dependent kinase inhibitor 1C (p57, Kip2)	-	HPRD,BioGRID	9465025
CHAF1A	CAF-1 \| CAF1 \| CAF1B \| CAF1P150 \| MGC71229 \| P150	chromatin assembly factor 1, subunit A (p150)	-	HPRD,BioGRID	10648606
CHTF18	C16orf41 \| C321D2.2 \| C321D2.3 \| C321D2.4 \| CHL12 \| Ctf18 \| RUVBL	CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)	-	HPRD	12766176
CHTF18			-	HPRD,BioGRID	12171929
CTF8	DERPC \| FLJ20400	chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	-	HPRD	12766176
DDX17	DKFZp761H2016 \| P72 \| RH70	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	DDX17 is a PCNA-binding protein	BIND	12171929
DHX9	DDX9 \| LKP \| NDHII \| RHA	DEAH (Asp-Glu-Ala-His) box polypeptide 9	-	HPRD	12171929
DNMT1	AIM \| CXXC9 \| DNMT \| FLJ16293 \| MCMT \| MGC104992	DNA (cytosine-5-)-methyltransferase 1	Affinity Capture-Western Reconstituted Complex	BioGRID	9302295 \|10888872 \|12354094
			DNMT1 is a PCNA-binding protein	BIND	12171929
			-	HPRD	9302295 \|12354094
DNTT	TDT	deoxynucleotidyltransferase, terminal	Co-purification Reconstituted Complex Two-hybrid	BioGRID	11554927
DNTTIP2	ERBP \| FCF2 \| HSU15552 \| LPTS-RP2 \| MGC163494 \| RP4-561L24.1 \| TdIF2	deoxynucleotidyltransferase, terminal, interacting protein 2	-	HPRD	12786946
DSCC1	DCC1 \| MGC5528 \| hDCC1	defective in sister chromatid cohesion 1 homolog (S. cerevisiae)	-	HPRD	12766176
DSCC1	DCC1 \| MGC5528 \| hDCC1		Hypothetical protein MGC5528 is a PCNA-binding protein.	BIND	12171929
EP300	KAT3B \| p300	E1A binding protein p300	-	HPRD,BioGRID	11268218
ERCC5	COFS3 \| ERCM2 \| UVDR \| XPG \| XPGC	excision repair cross-complementing rodent repair deficiency, complementation group 5	-	HPRD,BioGRID	9305916 \|10408173
EXO1	HEX1 \| hExoI	exonuclease 1	PCNA interacts with EXO1b.	BIND	15225546
FEN1	FEN-1 \| MF1 \| RAD2	flap structure-specific endonuclease 1	PCNA interacts with Fen1. This interaction was modeled on a demonstrated interaction between human PCNA and Fen1 from an unspecified species.	BIND	9705499
			PCNA interacts with Fen1.	BIND	9178907
			Affinity Capture-Western Co-purification Reconstituted Complex Two-hybrid	BioGRID	8876181 \|9305916 \|9545252 \|11430825 \|11601988 \|12853968
			FEN1 is a PCNA-binding protein	BIND	12171929
			-	HPRD	1477073 \|8876181 \|9305916 \|9545252 \|11430825
GADD45A	DDIT1 \| GADD45	growth arrest and DNA-damage-inducible, alpha	PCNA interacts with Gadd45.	BIND	9705499
			PCNA interacts with Gadd45.	BIND	9178907
			Gadd45a interacts with PCNA. This interaction was modeled on a demonstrated interaction between Gadd45a from an unspecified species and human PCNA.	BIND	12124778
			-	HPRD,BioGRID	7973727 \|10828065
			GADD45 interacts with PCNA.	BIND	10828065
GADD45B	DKFZp566B133 \| GADD45BETA \| MYD118	growth arrest and DNA-damage-inducible, beta	-	HPRD	10828065
			MYD118 interacts with PCNA.	BIND	10828065
			Gadd45b interacts with PCNA. This interaction was modeled on a demonstrated interaction between Gadd45b from an unspecified species and human PCNA.	BIND	12124778
GADD45G	CR6 \| DDIT2 \| GADD45gamma \| GRP17	growth arrest and DNA-damage-inducible, gamma	Gadd45g interacts with PCNA. This interaction was modeled on a demonstrated interaction between Gadd45g from an unspecified species and human PCNA.	BIND	12124778
GADD45G	CR6 \| DDIT2 \| GADD45gamma \| GRP17	growth arrest and DNA-damage-inducible, gamma	-	HPRD,BioGRID	10455148 \|11022036
HDAC1	DKFZp686H12203 \| GON-10 \| HD1 \| RPD3 \| RPD3L1	histone deacetylase 1	-	HPRD,BioGRID	11929879
HUS1	-	HUS1 checkpoint homolog (S. pombe)	-	HPRD,BioGRID	11077446
ING1	p24ING1c \| p33 \| p33ING1 \| p33ING1b \| p47 \| p47ING1a	inhibitor of growth family, member 1	-	HPRD,BioGRID	11682605 \|12015309
KCTD13	FKSG86 \| PDIP1 \| POLDIP1	potassium channel tetramerisation domain containing 13	C terminus of PDIP1 interacts with PCNA.	BIND	11593007
KCTD13	FKSG86 \| PDIP1 \| POLDIP1	potassium channel tetramerisation domain containing 13	-	HPRD,BioGRID	11593007
LIG1	MGC117397 \| MGC130025	ligase I, DNA, ATP-dependent	-	HPRD,BioGRID	12171929
LIG1	MGC117397 \| MGC130025	ligase I, DNA, ATP-dependent	LIG1 is a PCNA-binding protein	BIND	12171929
MCL1	BCL2L3 \| EAT \| MCL1L \| MCL1S \| MGC104264 \| MGC1839 \| TM	myeloid cell leukemia sequence 1 (BCL2-related)	Affinity Capture-Western Reconstituted Complex Two-hybrid	BioGRID	10978339
MSH2	COCA1 \| FCC1 \| HNPCC \| HNPCC1 \| LCFS2	mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)	-	HPRD,BioGRID	8858149 \|12171929
MSH3	DUP \| MGC163306 \| MGC163308 \| MRP1	mutS homolog 3 (E. coli)	MSH3 is a PCNA-binding protein	BIND	12171929
MSH3	DUP \| MGC163306 \| MGC163308 \| MRP1	mutS homolog 3 (E. coli)	-	HPRD,BioGRID	11005803 \|11274057 \|12171929
MSH6	GTBP \| HNPCC5 \| HSAP	mutS homolog 6 (E. coli)	-	HPRD	11005803 \|12171929
			Affinity Capture-MS Affinity Capture-Western Far Western Protein-peptide	BioGRID	11005803 \|11274057 \|12171929
			MSH6 is a PCNA-binding protein	BIND	12171929
MUTYH	MGC4416 \| MYH	mutY homolog (E. coli)	-	HPRD,BioGRID	11092888
MUTYH	MGC4416 \| MYH	mutY homolog (E. coli)	hMYH is associated in vivo with proliferating cell nuclear antigen (PCNA)	BIND	11092888
MYBBP1A	FLJ37886 \| P160 \| PAP2	MYB binding protein (P160) 1a	-	HPRD,BioGRID	12171929
MYBBP1A	FLJ37886 \| P160 \| PAP2	MYB binding protein (P160) 1a	MYBBP1A is a PCNA-binding protein	BIND	12171929
NONO	NMT55 \| NRB54 \| P54 \| P54NRB	non-POU domain containing, octamer-binding	NONO is a PCNA-binding protein	BIND	12171929
PARP1	ADPRT \| ADPRT1 \| PARP \| PARP-1 \| PPOL \| pADPRT-1	poly (ADP-ribose) polymerase 1	Affinity Capture-Western	BioGRID	12930846
PCNA	MGC8367	proliferating cell nuclear antigen	Co-purification	BioGRID	9545252
PCNA	MGC8367	proliferating cell nuclear antigen	PCNA interacts with PCNA.	BIND	10858286
POLB	MGC125976	polymerase (DNA directed), beta	Mammalian DNA beta-polymerase and PCNA can form a complex both in vitro and in vivo	BIND	12063248
POLD1	CDC2 \| POLD	polymerase (DNA directed), delta 1, catalytic subunit 125kDa	POLD1 is a PCNA-binding protein	BIND	12171929
POLD1	CDC2 \| POLD		-	HPRD,BioGRID	9563011
POLD2	-	polymerase (DNA directed), delta 2, regulatory subunit 50kDa	PCNA interacts with the small subunit of DNA polymerase delta	BIND	11986310
			-	HPRD	11986310 \|12171929
			-	HPRD,BioGRID	11986310
POLD3	KIAA0039 \| MGC119642 \| MGC119643 \| P66 \| P68	polymerase (DNA-directed), delta 3, accessory subunit	KIAA0039 is a PCNA-binding protein	BIND	12171929
			-	HPRD	10219083
			-	HPRD,BioGRID	11595739 \|12171929
POLDIP2	DKFZp586F1524 \| PDIP38 \| POLD4	polymerase (DNA-directed), delta interacting protein 2	-	HPRD,BioGRID	12522211
POLDIP2	DKFZp586F1524 \| PDIP38 \| POLD4	polymerase (DNA-directed), delta interacting protein 2	PDIP38 interacts with PCNA.	BIND	12522211
POLE	DKFZp434F222 \| FLJ21434 \| POLE1	polymerase (DNA directed), epsilon	-	HPRD,BioGRID	12171929
POLE	DKFZp434F222 \| FLJ21434 \| POLE1	polymerase (DNA directed), epsilon	POLE is a PCNA-binding protein	BIND	12171929
POLH	FLJ16395 \| FLJ21978 \| RAD30 \| RAD30A \| XP-V \| XPV	polymerase (DNA directed), eta	-	HPRD,BioGRID	11585903
POLL	BETA-N \| FLJ46002 \| POL-KAPPA	polymerase (DNA directed), lambda	-	HPRD,BioGRID	12368291
POLM	Tdt-N	polymerase (DNA directed), mu	-	HPRD	11724965
PRKDC	DNA-PKcs \| DNAPK \| DNPK1 \| HYRC \| HYRC1 \| XRCC7 \| p350	protein kinase, DNA-activated, catalytic polypeptide	-	HPRD,BioGRID	12171929
PRKDC	DNA-PKcs \| DNAPK \| DNPK1 \| HYRC \| HYRC1 \| XRCC7 \| p350	protein kinase, DNA-activated, catalytic polypeptide	PRKDC is a PCNA-binding protein	BIND	12171929
PTMA	MGC104802 \| TMSA	prothymosin, alpha	-	HPRD	11310559
RAD9A	RAD9	RAD9 homolog A (S. pombe)	-	HPRD	11994305
RFC1	A1 \| MGC51786 \| MHCBFB \| PO-GA \| RECC1 \| RFC \| RFC140	replication factor C (activator 1) 1, 145kDa	-	HPRD	8861969 \|12045192 \|12171929
RFC1	A1 \| MGC51786 \| MHCBFB \| PO-GA \| RECC1 \| RFC \| RFC140	replication factor C (activator 1) 1, 145kDa	Affinity Capture-MS Affinity Capture-Western Reconstituted Complex	BioGRID	8861969 \|8999859 \|10353443 \|12171929 \|12192049
RFC2	A1 \| MGC3665 \| RFC40	replication factor C (activator 1) 2, 40kDa	RFC2 is a PCNA-binding protein	BIND	12171929
			Affinity Capture-MS Reconstituted Complex	BioGRID	8093561 \|9228079 \|12171929
			-	HPRD	1313560 \|9228079 \|10051561 \|12171929
RFC3	MGC5276 \| RFC38	replication factor C (activator 1) 3, 38kDa	-	HPRD	10051561 \|12171929
			RFC3 is a PCNA-binding protein	BIND	12171929
			Affinity Capture-MS Affinity Capture-Western	BioGRID	12171929 \|12766176
RFC4	A1 \| MGC27291 \| RFC37	replication factor C (activator 1) 4, 37kDa	Affinity Capture-MS Affinity Capture-Western Reconstituted Complex	BioGRID	9228079 \|12171929
RFC4	A1 \| MGC27291 \| RFC37	replication factor C (activator 1) 4, 37kDa	-	HPRD	10051561 \|12171929
RFC5	MGC1155 \| RFC36	replication factor C (activator 1) 5, 36.5kDa	RFC5 is a PCNA-binding protein	BIND	12171929
			Affinity Capture-MS Reconstituted Complex	BioGRID	8999859 \|9228079 \|12171929
			-	HPRD	8999859 \|9751713 \|12171929 \|12237462
RPA1	HSSB \| REPA1 \| RF-A \| RP-A \| RPA70	replication protein A1, 70kDa	-	HPRD,BioGRID	12171929
RUVBL2	CGI-46 \| ECP51 \| INO80J \| REPTIN \| RVB2 \| TIH2 \| TIP48 \| TIP49B	RuvB-like 2 (E. coli)	Affinity Capture-MS	BioGRID	12171929
SUB1	MGC102747 \| P15 \| PC4 \| p14	SUB1 homolog (S. cerevisiae)	Two-hybrid	BioGRID	11313979
TCOF1	MFD1 \| treacle	Treacher Collins-Franceschetti syndrome 1	TCOF1 is a PCNA-binding protein	BIND	12171929
UNG	DGU \| DKFZp781L1143 \| HIGM4 \| UDG \| UNG1 \| UNG15 \| UNG2	uracil-DNA glycosylase	UNG is a PCNA-binding protein	BIND	12171929
WRN	DKFZp686C2056 \| RECQ3 \| RECQL2 \| RECQL3	Werner syndrome	-	HPRD,BioGRID	10871373 \|12633936
XRCC1	RCC	X-ray repair complementing defective repair in Chinese hamster cells 1	Affinity Capture-Western Co-localization FRET Reconstituted Complex	BioGRID	15107487
XRCC5	FLJ39089 \| KARP-1 \| KARP1 \| KU80 \| KUB2 \| Ku86 \| NFIV	X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)	-	HPRD,BioGRID	12393188
XRCC6	CTC75 \| CTCBF \| G22P1 \| KU70 \| ML8 \| TLAA	X-ray repair complementing defective repair in Chinese hamster cells 6	-	HPRD,BioGRID	11239001 \|12171929
YBX1	BP-8 \| CSDA2 \| CSDB \| DBPB \| MDR-NF1 \| MGC104858 \| MGC110976 \| MGC117250 \| NSEP-1 \| NSEP1 \| YB-1 \| YB1	Y box binding protein 1	-	HPRD,BioGRID	9927044

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
KEGG_DNA_REPLICATION	36	21	All SZGR genes in this pathway
KEGG_BASE_EXCISION_REPAIR	35	22	All SZGR genes in this pathway
KEGG_NUCLEOTIDE_EXCISION_REPAIR	44	25	All SZGR genes in this pathway
KEGG_MISMATCH_REPAIR	23	14	All SZGR genes in this pathway
KEGG_CELL_CYCLE	128	84	All SZGR genes in this pathway
BIOCARTA_P53_PATHWAY	16	13	All SZGR genes in this pathway
PID_P53_DOWNSTREAM_PATHWAY	137	94	All SZGR genes in this pathway
PID_ERA_GENOMIC_PATHWAY	65	37	All SZGR genes in this pathway
PID_BARD1_PATHWAY	29	19	All SZGR genes in this pathway
REACTOME_BASE_EXCISION_REPAIR	19	13	All SZGR genes in this pathway
REACTOME_G0_AND_EARLY_G1	25	13	All SZGR genes in this pathway
REACTOME_RESOLUTION_OF_AP_SITES_VIA_THE_MULTIPLE_NUCLEOTIDE_PATCH_REPLACEMENT_PATHWAY	17	11	All SZGR genes in this pathway
REACTOME_CELL_CYCLE	421	253	All SZGR genes in this pathway
REACTOME_PROCESSIVE_SYNTHESIS_ON_THE_LAGGING_STRAND	15	10	All SZGR genes in this pathway
REACTOME_CELL_CYCLE_MITOTIC	325	185	All SZGR genes in this pathway
REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER	45	24	All SZGR genes in this pathway
REACTOME_G1_S_TRANSITION	112	63	All SZGR genes in this pathway
REACTOME_POL_SWITCHING	13	9	All SZGR genes in this pathway
REACTOME_NUCLEOTIDE_EXCISION_REPAIR	51	27	All SZGR genes in this pathway
REACTOME_REPAIR_SYNTHESIS_FOR_GAP_FILLING_BY_DNA_POL_IN_TC_NER	14	11	All SZGR genes in this pathway
REACTOME_SYNTHESIS_OF_DNA	92	53	All SZGR genes in this pathway
REACTOME_MITOTIC_G1_G1_S_PHASES	137	79	All SZGR genes in this pathway
REACTOME_DNA_REPAIR	112	59	All SZGR genes in this pathway
REACTOME_CHROMOSOME_MAINTENANCE	122	80	All SZGR genes in this pathway
REACTOME_GLOBAL_GENOMIC_NER_GG_NER	35	20	All SZGR genes in this pathway
REACTOME_LAGGING_STRAND_SYNTHESIS	19	12	All SZGR genes in this pathway
REACTOME_DNA_REPLICATION	192	110	All SZGR genes in this pathway
REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION	35	17	All SZGR genes in this pathway
REACTOME_G1_S_SPECIFIC_TRANSCRIPTION	19	9	All SZGR genes in this pathway
REACTOME_TELOMERE_MAINTENANCE	75	57	All SZGR genes in this pathway
REACTOME_REMOVAL_OF_THE_FLAP_INTERMEDIATE_FROM_THE_C_STRAND	10	8	All SZGR genes in this pathway
REACTOME_EXTENSION_OF_TELOMERES	27	17	All SZGR genes in this pathway
REACTOME_S_PHASE	109	66	All SZGR genes in this pathway
REACTOME_DNA_STRAND_ELONGATION	30	18	All SZGR genes in this pathway
ONKEN_UVEAL_MELANOMA_UP	783	507	All SZGR genes in this pathway
SENGUPTA_NASOPHARYNGEAL_CARCINOMA_UP	294	178	All SZGR genes in this pathway
BORCZUK_MALIGNANT_MESOTHELIOMA_UP	305	185	All SZGR genes in this pathway
OSMAN_BLADDER_CANCER_UP	404	246	All SZGR genes in this pathway
RHEIN_ALL_GLUCOCORTICOID_THERAPY_DN	362	238	All SZGR genes in this pathway
TIEN_INTESTINE_PROBIOTICS_24HR_UP	557	331	All SZGR genes in this pathway
KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP	1278	748	All SZGR genes in this pathway
GRAHAM_NORMAL_QUIESCENT_VS_NORMAL_DIVIDING_DN	87	49	All SZGR genes in this pathway
DODD_NASOPHARYNGEAL_CARCINOMA_DN	1375	806	All SZGR genes in this pathway
RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP	633	376	All SZGR genes in this pathway
LAU_APOPTOSIS_CDKN2A_UP	55	40	All SZGR genes in this pathway
CHIARADONNA_NEOPLASTIC_TRANSFORMATION_KRAS_UP	126	72	All SZGR genes in this pathway
LINDGREN_BLADDER_CANCER_CLUSTER_3_UP	329	196	All SZGR genes in this pathway
MARKEY_RB1_CHRONIC_LOF_UP	115	78	All SZGR genes in this pathway
MARKEY_RB1_ACUTE_LOF_DN	228	137	All SZGR genes in this pathway
BERENJENO_TRANSFORMED_BY_RHOA_UP	536	340	All SZGR genes in this pathway
JOHANSSON_GLIOMAGENESIS_BY_PDGFB_UP	58	44	All SZGR genes in this pathway
OLSSON_E2F3_TARGETS_DN	49	33	All SZGR genes in this pathway
SCHAVOLT_TARGETS_OF_TP53_AND_TP63	16	12	All SZGR genes in this pathway
MATTIOLI_MGUS_VS_PCL	116	62	All SZGR genes in this pathway
ROSTY_CERVICAL_CANCER_PROLIFERATION_CLUSTER	140	73	All SZGR genes in this pathway
PATIL_LIVER_CANCER	747	453	All SZGR genes in this pathway
DACOSTA_UV_RESPONSE_VIA_ERCC3_UP	309	199	All SZGR genes in this pathway
AMUNDSON_GENOTOXIC_SIGNATURE	105	68	All SZGR genes in this pathway
MOHANKUMAR_TLX1_TARGETS_UP	414	287	All SZGR genes in this pathway
TSAI_RESPONSE_TO_IONIZING_RADIATION	149	101	All SZGR genes in this pathway
CALVET_IRINOTECAN_SENSITIVE_VS_REVERTED_DN	5	5	All SZGR genes in this pathway
PUJANA_XPRSS_INT_NETWORK	168	103	All SZGR genes in this pathway
PUJANA_BRCA1_PCC_NETWORK	1652	1023	All SZGR genes in this pathway
PUJANA_BRCA2_PCC_NETWORK	423	265	All SZGR genes in this pathway
PUJANA_ATM_PCC_NETWORK	1442	892	All SZGR genes in this pathway
PUJANA_CHEK2_PCC_NETWORK	779	480	All SZGR genes in this pathway
PUJANA_BRCA_CENTERED_NETWORK	117	72	All SZGR genes in this pathway
KAUFFMANN_MELANOMA_RELAPSE_UP	61	25	All SZGR genes in this pathway
LOPEZ_MBD_TARGETS	957	597	All SZGR genes in this pathway
SCIAN_INVERSED_TARGETS_OF_TP53_AND_TP73_UP	11	9	All SZGR genes in this pathway
CAFFAREL_RESPONSE_TO_THC_24HR_5_UP	34	23	All SZGR genes in this pathway
BENPORATH_NANOG_TARGETS	988	594	All SZGR genes in this pathway
BENPORATH_MYC_MAX_TARGETS	775	494	All SZGR genes in this pathway
BENPORATH_CYCLING_GENES	648	385	All SZGR genes in this pathway
BENPORATH_PROLIFERATION	147	80	All SZGR genes in this pathway
SAKAI_TUMOR_INFILTRATING_MONOCYTES_DN	81	51	All SZGR genes in this pathway
SUNG_METASTASIS_STROMA_DN	54	34	All SZGR genes in this pathway
MORI_IMMATURE_B_LYMPHOCYTE_DN	90	55	All SZGR genes in this pathway
KAUFFMANN_DNA_REPAIR_GENES	230	137	All SZGR genes in this pathway
KAUFFMANN_DNA_REPLICATION_GENES	147	87	All SZGR genes in this pathway
BASSO_B_LYMPHOCYTE_NETWORK	143	96	All SZGR genes in this pathway
KANNAN_TP53_TARGETS_UP	58	40	All SZGR genes in this pathway
LIN_APC_TARGETS	77	55	All SZGR genes in this pathway
TARTE_PLASMA_CELL_VS_PLASMABLAST_DN	309	206	All SZGR genes in this pathway
SMITH_TERT_TARGETS_DN	87	69	All SZGR genes in this pathway
REN_BOUND_BY_E2F	61	40	All SZGR genes in this pathway
SASAKI_ADULT_T_CELL_LEUKEMIA	176	122	All SZGR genes in this pathway
YU_MYC_TARGETS_UP	42	26	All SZGR genes in this pathway
LEI_MYB_TARGETS	318	215	All SZGR genes in this pathway
LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_DN	163	115	All SZGR genes in this pathway
FERRANDO_T_ALL_WITH_MLL_ENL_FUSION_DN	87	57	All SZGR genes in this pathway
HADDAD_B_LYMPHOCYTE_PROGENITOR	293	193	All SZGR genes in this pathway
VERNELL_RETINOBLASTOMA_PATHWAY_UP	70	47	All SZGR genes in this pathway
YAGI_AML_FAB_MARKERS	191	131	All SZGR genes in this pathway
IGLESIAS_E2F_TARGETS_UP	151	103	All SZGR genes in this pathway
KAMMINGA_EZH2_TARGETS	41	26	All SZGR genes in this pathway
ZAMORA_NOS2_TARGETS_UP	69	41	All SZGR genes in this pathway
HEDENFALK_BREAST_CANCER_HEREDITARY_VS_SPORADIC	50	32	All SZGR genes in this pathway
LEE_CALORIE_RESTRICTION_NEOCORTEX_UP	83	66	All SZGR genes in this pathway
BLALOCK_ALZHEIMERS_DISEASE_DN	1237	837	All SZGR genes in this pathway
JIANG_VHL_TARGETS	138	91	All SZGR genes in this pathway
MAHAJAN_RESPONSE_TO_IL1A_DN	76	57	All SZGR genes in this pathway
INGA_TP53_TARGETS	17	13	All SZGR genes in this pathway
RHODES_UNDIFFERENTIATED_CANCER	69	44	All SZGR genes in this pathway
MACLACHLAN_BRCA1_TARGETS_UP	21	16	All SZGR genes in this pathway
BURTON_ADIPOGENESIS_3	101	64	All SZGR genes in this pathway
SESTO_RESPONSE_TO_UV_C0	107	72	All SZGR genes in this pathway
MODY_HIPPOCAMPUS_PRENATAL	42	33	All SZGR genes in this pathway
SONG_TARGETS_OF_IE86_CMV_PROTEIN	60	42	All SZGR genes in this pathway
HEDENFALK_BREAST_CANCER_BRCA1_VS_BRCA2	163	113	All SZGR genes in this pathway
KALMA_E2F1_TARGETS	11	7	All SZGR genes in this pathway
LY_AGING_OLD_DN	56	35	All SZGR genes in this pathway
SIMBULAN_PARP1_TARGETS_DN	17	10	All SZGR genes in this pathway
MARIADASON_RESPONSE_TO_BUTYRATE_SULINDAC_6	52	32	All SZGR genes in this pathway
MARTINEZ_RESPONSE_TO_TRABECTEDIN_DN	271	175	All SZGR genes in this pathway
BILD_E2F3_ONCOGENIC_SIGNATURE	246	153	All SZGR genes in this pathway
ZHONG_SECRETOME_OF_LUNG_CANCER_AND_ENDOTHELIUM	66	47	All SZGR genes in this pathway
HILLION_HMGA1_TARGETS	90	71	All SZGR genes in this pathway
HILLION_HMGA1B_TARGETS	92	68	All SZGR genes in this pathway
DACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_UP	77	47	All SZGR genes in this pathway
STEIN_ESRRA_TARGETS_RESPONSIVE_TO_ESTROGEN_DN	41	26	All SZGR genes in this pathway
KYNG_DNA_DAMAGE_BY_4NQO_OR_UV	63	44	All SZGR genes in this pathway
KYNG_DNA_DAMAGE_DN	195	135	All SZGR genes in this pathway
SARRIO_EPITHELIAL_MESENCHYMAL_TRANSITION_UP	180	114	All SZGR genes in this pathway
WHITEFORD_PEDIATRIC_CANCER_MARKERS	116	63	All SZGR genes in this pathway
GRADE_COLON_CANCER_UP	871	505	All SZGR genes in this pathway
GRADE_COLON_AND_RECTAL_CANCER_UP	285	167	All SZGR genes in this pathway
LABBE_WNT3A_TARGETS_UP	112	71	All SZGR genes in this pathway
BHATI_G2M_ARREST_BY_2METHOXYESTRADIOL_UP	125	68	All SZGR genes in this pathway
BRUECKNER_TARGETS_OF_MIRLET7A3_UP	111	69	All SZGR genes in this pathway
BLUM_RESPONSE_TO_SALIRASIB_DN	342	220	All SZGR genes in this pathway
MUELLER_PLURINET	299	189	All SZGR genes in this pathway
WANG_TUMOR_INVASIVENESS_UP	374	247	All SZGR genes in this pathway
LEE_LIVER_CANCER_SURVIVAL_DN	175	103	All SZGR genes in this pathway
GOLDRATH_ANTIGEN_RESPONSE	346	192	All SZGR genes in this pathway
MARSHALL_VIRAL_INFECTION_RESPONSE_DN	29	21	All SZGR genes in this pathway
CHANG_CYCLING_GENES	148	83	All SZGR genes in this pathway
SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6	456	285	All SZGR genes in this pathway
CHEN_METABOLIC_SYNDROM_NETWORK	1210	725	All SZGR genes in this pathway
CROONQUIST_IL6_DEPRIVATION_DN	98	69	All SZGR genes in this pathway
CROONQUIST_NRAS_SIGNALING_DN	72	47	All SZGR genes in this pathway
ISHIDA_E2F_TARGETS	53	27	All SZGR genes in this pathway
CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN	193	112	All SZGR genes in this pathway
HOSHIDA_LIVER_CANCER_LATE_RECURRENCE_UP	62	42	All SZGR genes in this pathway
STEIN_ESR1_TARGETS	85	55	All SZGR genes in this pathway
SAKAI_CHRONIC_HEPATITIS_VS_LIVER_CANCER_UP	83	63	All SZGR genes in this pathway
KOBAYASHI_EGFR_SIGNALING_24HR_DN	251	151	All SZGR genes in this pathway
WINNEPENNINCKX_MELANOMA_METASTASIS_UP	162	86	All SZGR genes in this pathway
KYNG_WERNER_SYNDROM_AND_NORMAL_AGING_UP	93	62	All SZGR genes in this pathway
DANG_MYC_TARGETS_UP	143	100	All SZGR genes in this pathway
DANG_BOUND_BY_MYC	1103	714	All SZGR genes in this pathway
WONG_EMBRYONIC_STEM_CELL_CORE	335	193	All SZGR genes in this pathway
YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_10	69	38	All SZGR genes in this pathway
WHITFIELD_CELL_CYCLE_LITERATURE	44	25	All SZGR genes in this pathway
WHITFIELD_CELL_CYCLE_G1_S	147	76	All SZGR genes in this pathway
KARLSSON_TGFB1_TARGETS_DN	207	139	All SZGR genes in this pathway
MARTENS_TRETINOIN_RESPONSE_DN	841	431	All SZGR genes in this pathway
CHICAS_RB1_TARGETS_SENESCENT	572	352	All SZGR genes in this pathway
DUTERTRE_ESTRADIOL_RESPONSE_6HR_UP	229	149	All SZGR genes in this pathway
DUTERTRE_ESTRADIOL_RESPONSE_24HR_UP	324	193	All SZGR genes in this pathway
FIGUEROA_AML_METHYLATION_CLUSTER_1_DN	48	30	All SZGR genes in this pathway
JOHNSTONE_PARVB_TARGETS_3_DN	918	550	All SZGR genes in this pathway
FEVR_CTNNB1_TARGETS_DN	553	343	All SZGR genes in this pathway
PHONG_TNF_RESPONSE_VIA_P38_COMPLETE	227	151	All SZGR genes in this pathway
ABRAMSON_INTERACT_WITH_AIRE	45	33	All SZGR genes in this pathway
WARTERS_IR_RESPONSE_5GY	47	23	All SZGR genes in this pathway
ZHOU_CELL_CYCLE_GENES_IN_IR_RESPONSE_24HR	128	73	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-217	273	279	m8	hsa-miR-217	UACUGCAUCAGGAACUGAUUGGAU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.