Gene Page: LANCL2

Summary
GeneID  55915
Symbol  LANCL2
Synonyms  GPR69B|MGC87139|TASP
Description  LanC lantibiotic synthetase component C-like 2 (bacterial)
See related  HGNC:6509|Ensembl:ENSG00000132434|HPRD:13956|
Locus tag  -
Gene type  protein-coding
Map location  7q31.1-q31.33
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenic, schizophrenia]Click to show detail
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
TMEM132B0.690.75
BCL2L130.680.68
ARNT20.680.72
SENP20.670.70
RGL10.670.69
COL5A20.670.76
SCRN10.660.65
TBC1D50.660.68
IPO80.650.63
DPY19L10.650.71
Top 10 negatively co-expressed genes
AF347015.21-0.51-0.38
APOC1-0.45-0.31
C1orf54-0.42-0.37
MT-CO2-0.41-0.34
AF347015.18-0.40-0.30
AL050337.1-0.40-0.33
IL32-0.40-0.30
AF347015.8-0.39-0.30
FAM159B-0.38-0.40
AC098691.2-0.38-0.32
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0003824catalytic activityIEA-
GO:0005524ATP bindingNAS11762191 
GO:0005525GTP bindingNAS11762191 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0016481negative regulation of transcriptionIDA12566319 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005829cytosolIDA12566319 
GO:0005634nucleusIDA12566319 
GO:0005737cytoplasmIEA-
GO:0005886plasma membraneIDA12566319 
 
Pathway annotation
Pathway namePathway size# SZGR genes in pathwayInfo
GARY_CD5_TARGETS_DN 431263All SZGR genes in this pathway
GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN 17811082All SZGR genes in this pathway
GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_DN 770415All SZGR genes in this pathway
LOCKWOOD_AMPLIFIED_IN_LUNG_CANCER 214139All SZGR genes in this pathway
DOUGLAS_BMI1_TARGETS_UP 566371All SZGR genes in this pathway
SANSOM_APC_TARGETS_REQUIRE_MYC 210123All SZGR genes in this pathway
FOSTER_TOLERANT_MACROPHAGE_DN 409268All SZGR genes in this pathway
MARTINEZ_RB1_TARGETS_UP 673430All SZGR genes in this pathway
MARTINEZ_TP53_TARGETS_UP 602364All SZGR genes in this pathway
MARTINEZ_RB1_AND_TP53_TARGETS_UP 601369All SZGR genes in this pathway
CAIRO_HEPATOBLASTOMA_CLASSES_UP 605377All SZGR genes in this pathway
GOBERT_OLIGODENDROCYTE_DIFFERENTIATION_UP 570339All SZGR genes in this pathway
ROESSLER_LIVER_CANCER_METASTASIS_DN 5329All SZGR genes in this pathway
ZWANG_EGF_PERSISTENTLY_UP 3224All SZGR genes in this pathway
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-494228234m8hsa-miR-494brainUGAAACAUACACGGGAAACCUCUU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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