The pahtway p3400 has 210 genes in the original annotation. Currently, there are 123 genes in SZGR (with evidence in schizophrenia) that are present at this pathway.
|
Gene ID |
Symbol |
Synonyms |
Official Full Name |
Start Site |
End Site |
Location |
50674 | NEUROG3 | Atoh5 | Math4B | NGN-3 | bHLHa7 | ngn3 | neurogenin 3 | | | 10q21.3 |
4791 | NFKB2 | CVID10 | H2TF1 | LYT-10 | LYT10 | NF-kB2 | p100 | p49/p100 | p52 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 | | | 10q24 |
8861 | LDB1 | CLIM2 | NLI | LIM domain binding 1 | | | 10q24-q25 |
64077 | LHPP | HDHD2B | phospholysine phosphohistidine inorganic pyrophosphate phosphatase | | | 10q26.13 |
6207 | RPS13 | S13 | ribosomal protein S13 | | | 11p15 |
9415 | FADS2 | D6D | DES6 | FADSD6 | LLCDL2 | SLL0262 | TU13 | fatty acid desaturase 2 | | | 11q12.2 |
79080 | CCDC86 | - | coiled-coil domain containing 86 | | | 11q12.2 |
3177 | SLC29A2 | DER12 | ENT2 | HNP36 | solute carrier family 29 member 2 | | | 11q13 |
26472 | PPP1R14B | PHI-1 | PLCB3N | PNG | SOM172 | protein phosphatase 1 regulatory inhibitor subunit 14B | | | 11q13 |
84153 | RNASEH2C | AGS3 | AYP1 | ribonuclease H2 subunit C | | | 11q13.1 |
23365 | ARHGEF12 | LARG | PRO2792 | Rho guanine nucleotide exchange factor 12 | | | 11q23.3 |
6472 | SHMT2 | GLYA | HEL-S-51e | SHMT | serine hydroxymethyltransferase 2 | | | 12q12-q14 |
8086 | AAAS | AAA | AAASb | ADRACALA | ADRACALIN | ALADIN | GL003 | aladin WD repeat nucleoporin | | | 12q13 |
4234 | METTL1 | C12orf1 | TRM8 | TRMT8 | YDL201w | methyltransferase like 1 | | | 12q13 |
8914 | TIMELESS | TIM | TIM1 | hTIM | timeless circadian clock | | | 12q13.3 |
1019 | CDK4 | CMM3 | PSK-J3 | cyclin-dependent kinase 4 | | | 12q14 |
4598 | MVK | LRBP | MK | MVLK | POROK3 | mevalonate kinase | | | 12q24 |
121642 | ALKBH2 | ABH2 | alkB homolog 2, alpha-ketoglutarate-dependent dioxygenase | | | 12q24.11 |
5426 | POLE | CRCS12 | FILS | POLE1 | polymerase (DNA) epsilon, catalytic subunit | | | 12q24.3 |
54841 | BIVM | - | basic, immunoglobulin-like variable motif containing | | | 13q33.1 |
115708 | TRMT61A | C14orf172 | GCD14 | Gcd14p | TRM61 | hTRM61 | tRNA methyltransferase 61A | | | 14q32 |
64919 | BCL11B | ATL1 | ATL1-alpha | ATL1-beta | ATL1-delta | ATL1-gamma | CTIP-2 | CTIP2 | RIT1 | ZNF856B | hRIT1-alpha | B-cell CLL/lymphoma 11B | | | 14q32.2 |
51550 | CINP | - | cyclin-dependent kinase 2 interacting protein | | | 14q32.31 |
9990 | SLC12A6 | ACCPN | KCC3 | KCC3A | KCC3B | solute carrier family 12 member 6 | | | 15q13 |
701 | BUB1B | BUB1beta | BUBR1 | Bub1A | MAD3L | MVA1 | SSK1 | hBUBR1 | BUB1 mitotic checkpoint serine/threonine kinase B | | | 15q15 |
28232 | SLCO3A1 | OATP-D | OATP3A1 | OATPD | SLC21A11 | solute carrier organic anion transporter family member 3A1 | | | 15q26 |
79874 | RABEP2 | FRA | rabaptin, RAB GTPase binding effector protein 2 | | | 16p11.2 |
2072 | ERCC4 | ERCC11 | FANCQ | RAD1 | XFEPS | XPF | excision repair cross-complementation group 4 | | | 16p13.12 |
51330 | TNFRSF12A | CD266 | FN14 | TWEAKR | tumor necrosis factor receptor superfamily member 12A | | | 16p13.3 |
1387 | CREBBP | CBP | KAT3A | RSTS | CREB binding protein | | | 16p13.3 |
9894 | TELO2 | CLK2 | TEL2 | telomere maintenance 2 | | | 16p13.3 |
55239 | OGFOD1 | TPA1 | 2-oxoglutarate and iron dependent oxygenase domain containing 1 | | | 16q12.2 |
29109 | FHOD1 | FHOS | formin homology 2 domain containing 1 | | | 16q22 |
23536 | ADAT1 | HADAT1 | adenosine deaminase, tRNA specific 1 | | | 16q23.1 |
23300 | ATMIN | ASCIZ | ZNF822 | ATM interactor | | | 16q23.2 |
2622 | GAS8 | CILD33 | DRC4 | GAS11 | growth arrest specific 8 | | | 16q24.3 |
2175 | FANCA | FA | FA-H | FA1 | FAA | FACA | FAH | FANCH | Fanconi anemia complementation group A | | | 16q24.3 |
6470 | SHMT1 | CSHMT | SHMT | serine hydroxymethyltransferase 1 (soluble) | | | 17p11.2 |
5598 | MAPK7 | BMK1 | ERK4 | ERK5 | PRKM7 | mitogen-activated protein kinase 7 | | | 17p11.2 |
1819 | DRG2 | - | developmentally regulated GTP binding protein 2 | | | 17p11.2 |
124944 | C17orf49 | BAP18 | HEPIS | chromosome 17 open reading frame 49 | | | 17p13.1 |
7157 | TP53 | BCC7 | LFS1 | P53 | TRP53 | tumor protein p53 | | | 17p13.1 |
4830 | NME1 | AWD | GAAD | NB | NBS | NDKA | NDPK-A | NDPKA | NM23 | NM23-H1 | NME/NM23 nucleoside diphosphate kinase 1 | | | 17q21.3 |
8313 | AXIN2 | AXIL | ODCRCS | axin 2 | | | 17q24.1 |
220134 | SKA1 | C18orf24 | spindle and kinetochore associated complex subunit 1 | | | 18q21.1 |
56342 | PPAN | BXDC3 | SSF | SSF-1 | SSF1 | SSF2 | peter pan homolog (Drosophila) | | | 19p13 |
10755 | GIPC1 | C19orf3 | GIPC | GLUT1CBP | Hs.6454 | IIP-1 | NIP | RGS19IP1 | SEMCAP | SYNECTIIN | SYNECTIN | TIP-2 | GIPC PDZ domain containing family member 1 | | | 19p13.1 |
84705 | GTPBP3 | COXPD23 | GTPBG3 | MSS1 | MTGP1 | THDF1 | GTP binding protein 3 (mitochondrial) | | | 19p13.11 |
5886 | RAD23A | HHR23A | HR23A | RAD23 homolog A, nucleotide excision repair protein | | | 19p13.2 |
7064 | THOP1 | EP24.15 | MEPD_HUMAN | MP78 | TOP | thimet oligopeptidase 1 | | | 19p13.3 |
53615 | MBD3 | - | methyl-CpG binding domain protein 3 | | | 19p13.3 |
81890 | QTRT1 | FP3235 | TGT | TGUT | queuine tRNA-ribosyltransferase catalytic subunit 1 | | | 19p13.3 |
56931 | DUS3L | DUS3 | dihydrouridine synthase 3 like | | | 19p13.3 |
2067 | ERCC1 | COFS4 | RAD10 | UV20 | excision repair cross-complementation group 1 | | | 19q13.32 |
53635 | PTOV1 | ACID2 | PTOV-1 | prostate tumor overexpressed 1 | | | 19q13.33 |
26227 | PHGDH | 3-PGDH | 3PGDH | HEL-S-113 | NLS | NLS1 | PDG | PGAD | PGD | PGDH | PHGDHD | SERA | phosphoglycerate dehydrogenase | | | 1p12 |
23576 | DDAH1 | DDAH | HEL-S-16 | dimethylarginine dimethylaminohydrolase 1 | | | 1p22 |
1486 | CTBS | CTB | chitobiase | | | 1p22 |
7804 | LRP8 | APOER2 | HSZ75190 | LRP-8 | MCI1 | LDL receptor related protein 8 | | | 1p34 |
1802 | DPH2 | DPH2L2 | DPH2 homolog | | | 1p34 |
126661 | CCDC163P | C1orf231 | coiled-coil domain containing 163, pseudogene | | | 1p34.1 |
8761 | PABPC4 | APP-1 | APP1 | PABP4 | iPABP | poly(A) binding protein, cytoplasmic 4 (inducible form) | | | 1p34.2 |
6723 | SRM | PAPT | SPDSY | SPS1 | SRML1 | spermidine synthase | | | 1p36-p22 |
2048 | EPHB2 | CAPB | DRT | EK5 | EPHT3 | ERK | Hek5 | PCBC | Tyro5 | EPH receptor B2 | | | 1p36.1-p35 |
3104 | ZBTB48 | HKR3 | ZNF855 | pp9964 | zinc finger and BTB domain containing 48 | | | 1p36.3 |
23380 | SRGAP2 | ARHGAP34 | FNBP2 | SRGAP2A | SRGAP3 | SLIT-ROBO Rho GTPase activating protein 2 | | | 1q32.1 |
10528 | NOP56 | NOL5A | SCA36 | NOP56 ribonucleoprotein | | | 20p13 |
1789 | DNMT3B | ICF | ICF1 | M.HsaIIIB | DNA (cytosine-5-)-methyltransferase 3 beta | | | 20q11.2 |
60436 | TGIF2 | - | TGFB induced factor homeobox 2 | | | 20q11.23 |
655 | BMP7 | OP-1 | bone morphogenetic protein 7 | | | 20q13 |
54093 | SETD4 | C21orf18 | C21orf27 | SET domain containing 4 | | | 21q22.13 |
10785 | WDR4 | TRM82 | TRMT82 | WD repeat domain 4 | | | 21q22.3 |
7485 | WRB | CHD5 | GET1 | tryptophan rich basic protein | | | 21q22.3 |
637 | BID | FP497 | BH3 interacting domain death agonist | | | 22q11.1 |
7290 | HIRA | DGCR1 | TUP1 | TUPLE1 | histone cell cycle regulator | | | 22q11.21 |
10587 | TXNRD2 | SELZ | TR | TR-BETA | TR3 | TRXR2 | thioredoxin reductase 2 | | | 22q11.21 |
402055 | SRRD | HC/HCC | SRR1L | SRR1 domain containing | | | 22q12.1 |
5372 | PMM1 | Sec53 | phosphomannomutase 1 | | | 22q13.2 |
84058 | WDR54 | - | WD repeat domain 54 | | | 2p13.1 |
10322 | SMYD5 | NN8-4AG | RAI15 | RRG1 | ZMYND23 | SMYD family member 5 | | | 2p13.2 |
10574 | CCT7 | CCTETA | CCTH | NIP7-1 | TCP1ETA | chaperonin containing TCP1 subunit 7 | | | 2p13.2 |
53335 | BCL11A | BCL11A-L | BCL11A-S | BCL11A-XL | BCL11a-M | CTIP1 | EVI9 | HBFQTL5 | ZNF856 | B-cell CLL/lymphoma 11A | | | 2p16.1 |
790 | CAD | CDG1Z | carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase | | | 2p22-p21 |
55622 | TTC27 | - | tetratricopeptide repeat domain 27 | | | 2p22.3 |
10056 | FARSB | FARSLB | FRSB | HSPC173 | PheHB | PheRS | phenylalanyl-tRNA synthetase beta subunit | | | 2q36.1 |
728294 | D2HGDH | D2HGD | D-2-hydroxyglutarate dehydrogenase | | | 2q37.3 |
1841 | DTYMK | CDC8 | PP3731 | TMPK | TYMK | deoxythymidylate kinase | | | 2q37.3 |
7869 | SEMA3B | LUCA-1 | SEMA5 | SEMAA | SemA | semaV | semaphorin 3B | | | 3p21.3 |
80746 | TSEN2 | PCH2B | SEN2 | SEN2L | tRNA splicing endonuclease subunit 2 | | | 3p25.2 |
79663 | HSPBAP1 | PASS1 | HSPB1 associated protein 1 | | | 3q21.1 |
7468 | WHSC1 | MMSET | NSD2 | REIIBP | TRX5 | WHS | Wolf-Hirschhorn syndrome candidate 1 | | | 4p16.3 |
6002 | RGS12 | - | regulator of G-protein signaling 12 | | | 4p16.3 |
54433 | GAR1 | NOLA1 | GAR1 ribonucleoprotein | | | 4q25 |
26064 | RAI14 | NORPEG | RAI13 | retinoic acid induced 14 | | | 5p13.3-p13.2 |
84327 | ZBED3 | - | zinc finger BED-type containing 3 | | | 5q13.3 |
9456 | HOMER1 | HOMER | HOMER1A | HOMER1B | HOMER1C | SYN47 | Ves-1 | homer scaffolding protein 1 | | | 5q14.2 |
55568 | GALNT10 | GALNACT10 | PPGALNACT10 | PPGANTASE10 | polypeptide N-acetylgalactosaminyltransferase 10 | | | 5q33.2 |
55651 | NHP2 | DKCB2 | NHP2P | NOLA2 | NHP2 ribonucleoprotein | | | 5q35.3 |
7407 | VARS | G7A | VARS1 | VARS2 | valyl-tRNA synthetase | | | 6p21.3 |
6204 | RPS10 | DBA9 | S10 | ribosomal protein S10 | | | 6p21.31 |
6659 | SOX4 | EVI16 | SRY-box 4 | | | 6p22.3 |
10345 | TRDN | CPVT5 | TDN | TRISK | triadin | | | 6q22.31 |
257218 | SHPRH | bA545I5.2 | SNF2 histone linker PHD RING helicase | | | 6q24.3 |
3205 | HOXA9 | ABD-B | HOX1 | HOX1.7 | HOX1G | homeobox A9 | | | 7p15.2 |
3955 | LFNG | SCDO3 | LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase | | | 7p22.2 |
55695 | NSUN5 | NOL1 | NOL1R | NSUN5A | WBSCR20 | WBSCR20A | p120 | p120(NOL1) | NOP2/Sun RNA methyltransferase family member 5 | | | 7q11.23 |
4176 | MCM7 | CDC47 | MCM2 | P1.1-MCM3 | P1CDC47 | P85MCM | PNAS146 | PPP1R104 | minichromosome maintenance complex component 7 | | | 7q21.3-q22.1 |
55915 | LANCL2 | GPR69B | TASP | LanC like 2 | | | 7q31.1-q31.33 |
168850 | ZNF800 | - | zinc finger protein 800 | | | 7q31.33 |
84928 | TMEM209 | NET31 | transmembrane protein 209 | | | 7q32.2 |
57604 | KIAA1456 | C8orf79 | TRM9L | KIAA1456 | | | 8p22 |
8323 | FZD6 | FZ-6 | FZ6 | HFZ6 | NDNC10 | frizzled class receptor 6 | | | 8q22.3-q23.1 |
64798 | DEPTOR | DEP.6 | DEPDC6 | DEP domain containing MTOR-interacting protein | | | 8q24.12 |
10221 | TRIB1 | C8FW | GIG-2 | GIG2 | SKIP1 | TRB-1 | TRB1 | tribbles pseudokinase 1 | | | 8q24.13 |
4609 | MYC | MRTL | MYCC | bHLHe39 | c-Myc | v-myc avian myelocytomatosis viral oncogene homolog | | | 8q24.21 |
54512 | EXOSC4 | RRP41 | RRP41A | Rrp41p | SKI6 | Ski6p | hRrp41p | p12A | exosome component 4 | | | 8q24.3 |
100130274 | CCDC166 | - | coiled-coil domain containing 166 | | | 8q24.3 |
10280 | SIGMAR1 | ALS16 | DSMA2 | OPRS1 | SIG-1R | SR-BP | SR-BP1 | SRBP | hSigmaR1 | sigma1R | sigma non-opioid intracellular receptor 1 | | | 9p13.3 |
340485 | ACER2 | ALKCDase2 | ASAH3L | alkaline ceramidase 2 | | | 9p22.1 |
4920 | ROR2 | BDB | BDB1 | NTRKR2 | receptor tyrosine kinase-like orphan receptor 2 | | | 9q22 |
10585 | POMT1 | LGMD2K | MDDGA1 | MDDGB1 | MDDGC1 | RT | protein O-mannosyltransferase 1 | | | 9q34.1 |
6837 | MED22 | MED24 | SURF5 | surf-5 | mediator complex subunit 22 | | | 9q34.2 |
170302 | ARX | CT121 | EIEE1 | ISSX | MRX29 | MRX32 | MRX33 | MRX36 | MRX38 | MRX43 | MRX54 | MRX76 | MRX87 | MRXS1 | PRTS | aristaless related homeobox | | | Xp21.3 |