Gene Page: BIVM

Summary
GeneID  54841
Symbol  BIVM
Synonyms  MGC133326
Description  basic, immunoglobulin-like variable motif containing
See related  HGNC:16034|Ensembl:ENSG00000134897|HPRD:09827|
Locus tag  RP11-484I6.1
Gene type  protein-coding
Map location  13q32-q33.1
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]Click to show detail
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
SLC25A390.900.87
PEMT0.850.81
GSTP10.850.79
COPE0.840.84
GPS10.830.81
SF3B50.830.81
TARBP20.810.78
MPDU10.810.80
AKR1A10.810.80
FLAD10.810.79
Top 10 negatively co-expressed genes
AF347015.27-0.53-0.59
AF347015.8-0.52-0.58
MT-ATP8-0.52-0.64
AF347015.15-0.51-0.58
AF347015.33-0.51-0.58
AF347015.26-0.51-0.59
MT-CYB-0.50-0.58
MT-CO2-0.49-0.54
AF347015.2-0.49-0.56
AF347015.31-0.48-0.53
Gene Ontology
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005634nucleusIEA-
GO:0005737cytoplasmIEA-
 
Pathway annotation
Pathway namePathway size# SZGR genes in pathwayInfo
HORIUCHI_WTAP_TARGETS_UP 306188All SZGR genes in this pathway
JAATINEN_HEMATOPOIETIC_STEM_CELL_UP 316190All SZGR genes in this pathway
BENPORATH_CYCLING_GENES 648385All SZGR genes in this pathway
GEORGES_TARGETS_OF_MIR192_AND_MIR215 893528All SZGR genes in this pathway
SANSOM_APC_MYC_TARGETS 217138All SZGR genes in this pathway
SANSOM_APC_TARGETS_REQUIRE_MYC 210123All SZGR genes in this pathway
ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP 863514All SZGR genes in this pathway
MIKKELSEN_ES_ICP_WITH_H3K4ME3 718401All SZGR genes in this pathway
MIKKELSEN_NPC_ICP_WITH_H3K4ME3 445257All SZGR genes in this pathway
WHITFIELD_CELL_CYCLE_S 16286All SZGR genes in this pathway
JOHNSTONE_PARVB_TARGETS_3_DN 918550All SZGR genes in this pathway
WAKABAYASHI_ADIPOGENESIS_PPARG_BOUND_8D 658397All SZGR genes in this pathway
ZWANG_TRANSIENTLY_UP_BY_1ST_EGF_PULSE_ONLY 1839928All SZGR genes in this pathway
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-146132138m8hsa-miR-146aUGAGAACUGAAUUCCAUGGGUU
hsa-miR-146bbrainUGAGAACUGAAUUCCAUAGGCU
miR-2812541260m8hsa-miR-28brainAAGGAGCUCACAGUCUAUUGAG
miR-495160316091Ahsa-miR-495brainAAACAAACAUGGUGCACUUCUUU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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