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GeneID |
8861
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Symbol |
LDB1
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Synonyms |
CLIM2|NLI
|
Description |
LIM domain binding 1 |
See related |
HGNC:6532|MIM:603451|Ensembl:ENSG00000198728|HPRD:09144| |
Locus tag |
- |
Gene type |
protein-coding |
Map location |
10q24-q25 |
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Gene set name |
Method of gene set |
Evidence |
Info |
GO_Annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 1 | |
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General Gene Expression (microarray) ? |
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Gene Expression in Brain Regions (new) |
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Top co-expressed genes in Brain Regions (new) |
|
Gene | Pearson's Correlation | Spearman's Correlation | | |
Top 10 positively co-expressed genes |
SMPD4 | 0.95 | 0.95 | | |
TSC2 | 0.95 | 0.95 | | |
CIZ1 | 0.94 | 0.93 | | |
PPRC1 | 0.94 | 0.94 | | |
EDC4 | 0.94 | 0.95 | | |
PPIL2 | 0.93 | 0.93 | | |
DHX34 | 0.93 | 0.92 | | |
KIAA0892 | 0.93 | 0.93 | | |
MAST2 | 0.93 | 0.92 | | |
AC145098.2 | 0.93 | 0.93 | | |
Top 10 negatively co-expressed genes | AF347015.31 | -0.76 | -0.86 | | |
AF347015.27 | -0.74 | -0.84 | | |
MT-CO2 | -0.74 | -0.85 | | |
AF347015.8 | -0.72 | -0.84 | | |
MT-CYB | -0.72 | -0.82 | | |
AF347015.33 | -0.72 | -0.80 | | |
AF347015.21 | -0.70 | -0.91 | | |
AF347015.15 | -0.69 | -0.81 | | |
HIGD1B | -0.68 | -0.79 | | |
C5orf53 | -0.68 | -0.70 | | |
|
Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0003714 | transcription corepressor activity | TAS | | 9391090 |
GO:0030274 | LIM domain binding | IPI | | 12792813 |
GO:0030274 | LIM domain binding | ISS | | - |
GO:0042803 | protein homodimerization activity | ISS | | - |
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0030182 | neuron differentiation | ISS | neuron (GO term level: 8) | - |
GO:0007275 | multicellular organismal development | NAS | | 12792813 |
GO:0045647 | negative regulation of erythrocyte differentiation | ISS | | - |
GO:0045892 | negative regulation of transcription, DNA-dependent | IDA | | 10767331 |
GO:0045892 | negative regulation of transcription, DNA-dependent | ISS | | - |
Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0005634 | nucleus | ISS | | - |
GO:0043234 | protein complex | ISS | | - |
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- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
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