Gene Page

Gene Page: ZFAND3

Summary

GeneID

60685

Symbol

ZFAND3

Synonyms

FLJ13222|FLJ17799|TEX27

Description

zinc finger, AN1-type domain 3

Locus tag

RP1-295F6.1

Gene type

protein-coding

Map location

6pter-p22.3

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_I

genome scan meta-analysis

Psr: 0.033

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.04433

Literature

High-throughput literature-search

Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]

Click to show detail

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0003677

DNA binding

IEA

GO:0008270

zinc ion binding

IEA

GO:0046872

metal ion binding

IEA

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
GARY_CD5_TARGETS_UP	473	314	All SZGR genes in this pathway
OSMAN_BLADDER_CANCER_UP	404	246	All SZGR genes in this pathway
GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN	1781	1082	All SZGR genes in this pathway
GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_DN	770	415	All SZGR genes in this pathway
BLALOCK_ALZHEIMERS_DISEASE_UP	1691	1088	All SZGR genes in this pathway
FOSTER_TOLERANT_MACROPHAGE_UP	156	92	All SZGR genes in this pathway
TOOKER_GEMCITABINE_RESISTANCE_UP	79	40	All SZGR genes in this pathway
KYNG_NORMAL_AGING_DN	30	13	All SZGR genes in this pathway
KYNG_WERNER_SYNDROM_DN	29	14	All SZGR genes in this pathway
WANG_RESPONSE_TO_GSK3_INHIBITOR_SB216763_UP	397	206	All SZGR genes in this pathway
LEE_BMP2_TARGETS_UP	745	475	All SZGR genes in this pathway
PEDRIOLI_MIR31_TARGETS_DN	418	245	All SZGR genes in this pathway
ZWANG_TRANSIENTLY_UP_BY_1ST_EGF_PULSE_ONLY	1839	928	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-101	142	149	1A,m8	hsa-miR-101	UACAGUACUGUGAUAACUGAAG
miR-124.1	312	318	1A	hsa-miR-124a	UUAAGGCACGCGGUGAAUGCCA
miR-124/506	483	489	m8	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
miR-124/506	483	489	m8	hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-139	144	150	m8	hsa-miR-139^brain	UCUACAGUGCACGUGUCU
miR-142-5p	2183	2189	m8	hsa-miR-142-5p	CAUAAAGUAGAAAGCACUAC
miR-144	143	149	1A	hsa-miR-144	UACAGUAUAGAUGAUGUACUAG
miR-149	70	76	1A	hsa-miR-149^brain	UCUGGCUCCGUGUCUUCACUCC
miR-186	122	128	1A	hsa-miR-186	CAAAGAAUUCUCCUUUUGGGCUU
miR-186	122	128	1A	hsa-miR-186	CAAAGAAUUCUCCUUUUGGGCUU
miR-214	2200	2207	1A,m8	hsa-miR-214^brain	ACAGCAGGCACAGACAGGCAG
miR-27	2028	2034	1A	hsa-miR-27a^brain	UUCACAGUGGCUAAGUUCCGC
miR-27	2028	2034	1A	hsa-miR-27b^brain	UUCACAGUGGCUAAGUUCUGC
miR-299-5p	2218	2224	1A	hsa-miR-299-5p	UGGUUUACCGUCCCACAUACAU
miR-338	289	295	1A	hsa-miR-338^brain	UCCAGCAUCAGUGAUUUUGUUGA
miR-381	212	218	1A	hsa-miR-381	UAUACAAGGGCAAGCUCUCUGU
miR-381	212	218	1A	hsa-miR-381	UAUACAAGGGCAAGCUCUCUGU
miR-495	2035	2042	1A,m8	hsa-miR-495^brain	AAACAAACAUGGUGCACUUCUUU
miR-542-3p	282	288	m8	hsa-miR-542-3p	UGUGACAGAUUGAUAACUGAAA
miR-543	43	49	1A	hsa-miR-543	AAACAUUCGCGGUGCACUUCU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.