|
|
| GeneID |
6855
|
| Symbol |
SYP
|
| Synonyms |
-
|
| Description |
synaptophysin |
| See related |
HGNC:11506|MIM:313475|Ensembl:ENSG00000102003|HPRD:02435| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
Xp11.23-p11.22 |
|
| |
|
|
| Gene set name |
Method of gene set |
Evidence |
Info |
| Literature | High-throughput literature-search | Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenic, schizophrenics, schizophrenia] | Click to show detail | | GO_Annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 6 | |
|
| |
| General Gene Expression (microarray) ? |
|
 |
| |
| Gene Expression in Brain Regions (new) |
|
| |
| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| POLD2 | 0.94 | 0.95 | | |
| PPP4C | 0.92 | 0.94 | | |
| CLPP | 0.92 | 0.92 | | |
| PTOV1 | 0.92 | 0.92 | | |
| AP4M1 | 0.91 | 0.92 | | |
| MIIP | 0.91 | 0.93 | | |
| BCS1L | 0.91 | 0.92 | | |
| GNB2 | 0.91 | 0.92 | | |
| PRMT1 | 0.91 | 0.94 | | |
| TSEN34 | 0.91 | 0.91 | | |
Top 10 negatively co-expressed genes | | AF347015.27 | -0.71 | -0.82 | | |
| AF347015.33 | -0.71 | -0.84 | | |
| MT-CO2 | -0.69 | -0.80 | | |
| MT-CYB | -0.69 | -0.82 | | |
| AF347015.8 | -0.69 | -0.82 | | |
| AF347015.31 | -0.68 | -0.79 | | |
| AF347015.15 | -0.68 | -0.82 | | |
| AF347015.2 | -0.67 | -0.83 | | |
| AF347015.26 | -0.66 | -0.83 | | |
| HLA-F | -0.64 | -0.69 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005509 | calcium ion binding | NAS | | - |
| GO:0005515 | protein binding | NAS | | 10620806 |
| GO:0005215 | transporter activity | IEA | | - |
| GO:0015485 | cholesterol binding | IDA | | 10620806 |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0016188 | synaptic vesicle maturation | NAS | Synap (GO term level: 8) | 10620806 |
| GO:0048499 | synaptic vesicle membrane organization | NAS | Synap (GO term level: 5) | 10620806 |
| GO:0006810 | transport | IEA | | - |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0042734 | presynaptic membrane | IEA | neuron, axon, Synap (GO term level: 5) | - |
| GO:0008021 | synaptic vesicle | IEA | Synap, Neurotransmitter (GO term level: 12) | - |
| GO:0019717 | synaptosome | IEA | Synap, Brain (GO term level: 7) | - |
| GO:0030285 | integral to synaptic vesicle membrane | NAS | Synap (GO term level: 14) | 1975480 |
| GO:0045202 | synapse | IEA | neuron, Synap, Neurotransmitter, Glial (GO term level: 2) | - |
| GO:0030054 | cell junction | IEA | | - |
| GO:0031410 | cytoplasmic vesicle | IEA | | - |
| |
|
|
| |
|
|
|
|
- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
|
