Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

5579

Name

PRKCB

Synonym

PKC-beta|PKCB|PRKCB1|PRKCB2;protein kinase C, beta;PRKCB;protein kinase C, beta

Definition

PKC-B|protein kinase C beta type|protein kinase C, beta 1 polypeptide

Position

16p11.2

Gene Type

protein-coding

TSG scores

Description

TUSON ranking

13335

TUSON P-value

1

Pathways and Diseases

Pathway

Vascular smooth muscle contraction;KEGG PATHWAY;hsa04270

Pathway

Fc gamma R-mediated phagocytosis;KEGG PATHWAY;hsa04666

Pathway

Non-small cell lung cancer;KEGG PATHWAY;hsa05223

Pathway

Phosphatidylinositol signaling system;KEGG PATHWAY;hsa04070

Pathway

Vibrio cholerae infection;KEGG PATHWAY;hsa05110

Pathway

Signaling by GPCR;Reactome;REACT:14797

Pathway

Metabotropic glutamate receptor group I pathway;PANTHER;P00041

Pathway

JNK signaling in the CD4+ TCR pathway;PID Curated;200129

Pathway

MAPK signaling pathway;KEGG PATHWAY;hsa04010

Pathway

5HT2 type receptor mediated signaling pathway;PANTHER;P04374

Pathway

Muscarinic acetylcholine receptor 1 and 3 signaling pathway;PANTHER;P00042

Pathway

Thyrotropin-releasing hormone receptor signaling pathway;PANTHER;P04394

Pathway

Salivary secretion;KEGG PATHWAY;hsa04970

Pathway

TCR signaling in naive CD4+ T cells;PID Curated;200022

Pathway

FGF signaling pathway;PANTHER;P00021

Pathway

Ras signaling in the CD4+ TCR pathway;PID Curated;200088

Pathway

Signaling events mediated by VEGFR1 and VEGFR2;PID Curated;200161

Pathway

Wnt signaling pathway;KEGG PATHWAY;hsa04310

Pathway

Amoebiasis;KEGG PATHWAY;hsa05146

Pathway

Melanogenesis;KEGG PATHWAY;hsa04916

Pathway

B cell receptor signaling pathway;KEGG PATHWAY;hsa04662

Pathway

Focal adhesion;KEGG PATHWAY;hsa04510

Pathway

VEGFR1 specific signals;PID Curated;200151

Pathway

Pathways in cancer;KEGG PATHWAY;hsa05200

Pathway

Endothelin signaling pathway;PANTHER;P00019

Pathway

ionomycin and phorbal ester signaling pathway;PID BioCarta;100121

Pathway

Carbohydrate digestion and absorption;KEGG PATHWAY;hsa04973

Pathway

Leukocyte transendothelial migration;KEGG PATHWAY;hsa04670

Pathway

Endothelins;PID Curated;200004

Pathway

TCR signaling in naive CD8+ T cells;PID Curated;200062

Pathway

Inflammation mediated by chemokine and cytokine signaling pathway;PANTHER;P00031

Pathway

Aldosterone-regulated sodium reabsorption;KEGG PATHWAY;hsa04960

Pathway

EGF receptor signaling pathway;PANTHER;P00018

Pathway

Heterotrimeric G-protein signaling pathway-Gq alpha and Go alpha mediated pathway;PANTHER;P00027

Pathway

ErbB signaling pathway;KEGG PATHWAY;hsa04012

Pathway

bioactive peptide induced signaling pathway;PID BioCarta;100226

Pathway

IL2-mediated signaling events;PID Curated;200082

Pathway

VEGF signaling pathway;KEGG PATHWAY;hsa04370

Pathway

Histamine H1 receptor mediated signaling pathway;PANTHER;P04385

Pathway

VEGF signaling pathway;PANTHER;P00056

Pathway

B cell activation;PANTHER;P00010

Pathway

Long-term potentiation;KEGG PATHWAY;hsa04720

Pathway

Wnt signaling pathway;PANTHER;P00057

Pathway

Fc epsilon RI signaling pathway;KEGG PATHWAY;hsa04664

Pathway

keratinocyte differentiation;PID BioCarta;100119

Pathway

Downstream signaling in naive CD8+ T cells;PID Curated;200184

Pathway

Thromboxane A2 receptor signaling;PID Curated;200069

Pathway

Synaptic Transmission;Reactome;REACT:13685

Pathway

Calcium signaling pathway;KEGG PATHWAY;hsa04020

Pathway

Angiogenesis;PANTHER;P00005

Pathway

Fc-epsilon receptor I signaling in mast cells;PID Curated;200003

Pathway

GnRH signaling pathway;KEGG PATHWAY;hsa04912

Pathway

Alzheimer disease-amyloid secretase pathway;PANTHER;P00003

Pathway

fc epsilon receptor i signaling in mast cells;PID BioCarta;100165

Pathway

Glioma;KEGG PATHWAY;hsa05214

Pathway

Pancreatic secretion;KEGG PATHWAY;hsa04972

Pathway

Gap junction;KEGG PATHWAY;hsa04540

Pathway

Oxytocin receptor mediated signaling pathway;PANTHER;P04391

Pathway

Hemostasis;Reactome;REACT:604

Pathway

Gastric acid secretion;KEGG PATHWAY;hsa04971

Pathway

Role of Calcineurin-dependent NFAT signaling in lymphocytes;PID Curated;200076

Pathway

Chemokine signaling pathway;KEGG PATHWAY;hsa04062

Pathway

Tight junction;KEGG PATHWAY;hsa04530

Pathway

Apoptosis signaling pathway;PANTHER;P00006

Pathway

Long-term depression;KEGG PATHWAY;hsa04730

Pathway

Leishmaniasis;KEGG PATHWAY;hsa05140

Pathway

Natural killer cell mediated cytotoxicity;KEGG PATHWAY;hsa04650

Disease

nephropathy, diabetic;GAD

Disease

RENAL;GAD

External Links

Links to Entrez Gene

5579

Links to all GeneRIF Items

5579

Links to iHOP

5579

Sequence Information

The sequences provided here are only the longest representative sequences, not covering all the isoforms.

Nucleotide Sequence

>5579 : length: 2022
atggctgacccggctgcggggccgccgccgagcgagggcgaggagagcaccgtgcgcttc
gcccgcaaaggcgccctccggcagaagaacgtgcatgaggtcaagaaccacaaattcacc
gcccgcttcttcaagcagcccaccttctgcagccactgcaccgacttcatctggggcttc
gggaagcagggattccagtgccaagtttgctgctttgtggtgcacaagcggtgccatgaa
tttgtcacattctcctgccctggcgctgacaagggtccagcctccgatgacccccgcagc
aaacacaagtttaagatccacacgtactccagccccacgttttgtgaccactgtgggtca
ctgctgtatggactcatccaccaggggatgaaatgtgacacctgcatgatgaatgtgcac
aagcgctgcgtgatgaatgttcccagcctgtgtggcacggaccacacggagcgccgcggc
cgcatctacatccaggcccacatcgacagggacgtcctcattgtcctcgtaagagatgct
aaaaaccttgtacctatggaccccaatggcctgtcagatccctacgtaaaactgaaactg
attcccgatcccaaaagtgagagcaaacagaagaccaaaaccatcaaatgctccctcaac
cctgagtggaatgagacatttagatttcagctgaaagaatcggacaaagacagaagactg
tcagtagagatttgggattgggatttgaccagcaggaatgacttcatgggatctttgtcc
tttgggatttctgaacttcagaaagccagtgttgatggctggtttaagttactgagccag
gaggaaggcgagtacttcaatgtgcctgtgccaccagaaggaagtgaggccaatgaagaa
ctgcggcagaaatttgagagggccaagatcagtcagggaaccaaggtcccggaagaaaag
acgaccaacactgtctccaaatttgacaacaatggcaacagagaccggatgaaactgacc
gattttaacttcctaatggtgctggggaaaggcagctttggcaaggtcatgctttcagaa
cgaaaaggcacagatgagctctatgctgtgaagatcctgaagaaggacgttgtgatccaa
gatgatgacgtggagtgcactatggtggagaagcgggtgttggccctgcctgggaagccg
cccttcctgacccagctccactcctgcttccagaccatggaccgcctgtactttgtgatg
gagtacgtgaatgggggcgacctcatgtatcacatccagcaagtcggccggttcaaggag
ccccatgctgtattttacgctgcagaaattgccatcggtctgttcttcttacagagtaag
ggcatcatttaccgtgacctaaaacttgacaacgtgatgctcgattctgagggacacatc
aagattgccgattttggcatgtgtaaggaaaacatctgggatggggtgacaaccaagaca
ttctgtggcactccagactacatcgcccccgagataattgcttatcagccctatgggaag
tccgtggattggtgggcatttggagtcctgctgtatgaaatgttggctgggcaggcaccc
tttgaaggggaggatgaagatgaactcttccaatccatcatggaacacaacgtagcctat
cccaagtctatgtccaaggaagctgtggccatctgcaaagggctgatgaccaaacaccca
ggcaaacgtctgggttgtggacctgaaggcgaacgtgatatcaaagagcatgcatttttc
cggtatattgattgggagaaacttgaacgcaaagagatccagcccccttataagccaaaa
gcttgtgggcgaaatgctgaaaacttcgaccgatttttcacccgccatccaccagtccta
acacctcccgaccaggaagtcatcaggaatattgaccaatcagaattcgaaggattttcc
tttgttaactctgaatttttaaaacccgaagtcaagagctaa

Protein Sequence

>5579 : length: 673
MADPAAGPPPSEGEESTVRFARKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTDFIWGF
GKQGFQCQVCCFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGS
LLYGLIHQGMKCDTCMMNVHKRCVMNVPSLCGTDHTERRGRIYIQAHIDRDVLIVLVRDA
KNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRL
SVEIWDWDLTSRNDFMGSLSFGISELQKASVDGWFKLLSQEEGEYFNVPVPPEGSEANEE
LRQKFERAKISQGTKVPEEKTTNTVSKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSE
RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM
EYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHI
KIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP
FEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF
RYIDWEKLERKEIQPPYKPKACGRNAENFDRFFTRHPPVLTPPDQEVIRNIDQSEFEGFS
FVNSEFLKPEVKS



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