| General information | Literature | Expression | Regulation | Variant | Interaction |
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Basic Information |
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|---|---|
Gene ID | 6599 |
Name | SMARCC1 |
Synonym | BAF155|CRACC1|Rsc8|SRG3|SWI3;SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1;SMARCC1;SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 |
Definition | BRG1-associated factor 155|SWI/SNF complex 155 kDa subunit|SWI/SNF complex subunit SMARCC1|SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 1|chromatin remodeling complex BAF155 subunit|mammalian chromatin remode |
Position | 3p21.31 |
Gene Type | protein-coding |
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TSG scores |
Description |
| TUSON ranking | 15377 |
TUSON P-value | 1 |
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Pathways and Diseases |
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Pathway | chromatin remodeling by hswi/snf atp-dependent complexes;PID BioCarta;100141 |
Pathway | Regulation of Androgen receptor activity;PID Curated;200102 |
Pathway | Wnt signaling pathway;PANTHER;P00057 |
Pathway | Glucocorticoid receptor regulatory network;PID Curated;200077 |
Pathway | the information processing pathway at the ifn beta enhancer;PID BioCarta;100079 |
Disease | Neoplasm metastasis;FunDO |
Disease | Prostate cancer;FunDO |
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External Links |
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Links to Entrez Gene | 6599 |
Links to all GeneRIF Items | 6599 |
Links to iHOP | 6599 |
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Sequence Information |
The sequences provided here are only the longest representative sequences, not covering all the isoforms. |
Nucleotide Sequence |
>6599 : length: 3318 atggccgcagcggcgggcggcggcgggccggggacagcggtaggcgccacgggctcgggg attgcggcggcagccgcaggcctagctgtttatcgacggaaggatgggggcccggccacc aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc aagcactacaagaagtatgttcatgcggatgctcctaccaataaaacactggctgggctg gtggtgcagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaacccggcc ttcaccaaactccctgcaaagtgtttcatggatttcaaagctggaggcgccttatgtcac attcttggggctgcttacaagtataaaaatgaacagggatggcggaggtttgacctacag aacccatctcgaatggatcgtaatgtggaaatgtttatgaacattgaaaaaacattggtg cagaacaattgtttgaccagacccaacatctacctcattccagacattgatctgaagttg gctaacaaattgaaagatatcatcaaacgacatcagggaacatttacggatgagaagtca aaagcttcccaccacatttacccatattcttcctcacaagacgatgaagaatggttgaga ccggtgatgagaaaagagaagcaagtgttagtgcattggggcttttacccagacagctat gatacttgggtccatagtaatgatgttgatgctgaaattgaagatccaccaattccagaa aaaccatggaaggttcatgtgaaatggattttggacactgatattttcaatgaatggatg aatgaggaggattatgaggtggatgaaaataggaagcctgtgagttttcgtcagcggatt tcaaccaagaatgaagagccagtcagaagtccagaaagaagagatagaaaagcatcagct aatgctcgaaagaggaaacattcgccttcgcctccccctccgacaccaacagaatcacgg aagaagagtgggaagaaaggccaagctagcctttatgggaagcgcagaagtcagaaagag gaagatgagcaagaagatctaaccaaggatatggaagacccaacacctgtacccaatata gaagaagtagtacttcccaaaaatgtgaacctaaagaaagatagtgaaaatacacctgtt aaaggaggaactgtagcggatctagatgagcaggatgaagaaacagtcacagcaggagga aaggaagatgaagatcctgccaaaggtgatcagagtcgatcagttgaccttggggaagat aatgtgacagagcagaccaatcacattattattcctagttatgcatcatggtttgattat aactgtattcatgtgattgaacggcgtgctcttcctgagttcttcaatggaaaaaacaaa tccaagactccagaaatatacttggcatatcgaaattttatgattgacacgtatcgtcta aacccccaagagtatttaactagcactgcttgtcggaggaacttgactggagatgtgtgt gctgtgatgagggtccatgcctttttagagcagtggggactcgttaattaccaagttgac ccggaaagtagacccatggcaatgggacctcctcctactcctcattttaatgtattagct gataccccctctgggcttgtgcctctgcatcttcgatcacctcaggttcctgctgctcaa cagatgctaaattttcctgagaaaaacaaggaaaaaccagttgatttgcagaactttggt ctccgtactgacatttactccaagaaaacattagcaaagagtaaaggtgctagtgctgga agagaatggactgaacaggagacccttctactcctggaggccctggagatgtacaaggat gattggaacaaagtgtcggaacatgttggaagtcgtactcaggatgaatgcatcctccac tttttgagacttcccattgaggacccataccttgagaattcagatgcttcccttgggcct ttggcctaccagcctgtccccttcagtcagtcaggaaatccagttatgagtactgttgct tttttggcatctgtggtggaccctcgcgtggcatctgctgcagcaaaagcggctttggag gagttttctcgggtccgggaggaggtaccactggaattggttgaagctcatgtcaagaaa gtacaagaagcagcacgagcctctgggaaagtggatcccacctacggtctggagagcagc tgcattgcaggcacagggcccgatgagccagagaagcttgaaggagctgaagaggaaaaa atggaagccgaccctgatggtcagcagcctgaaaaggcagaaaataaagtggaaaatgaa acggatgaaggtgataaagcacaagatggagaaaatgaaaaaaatagtgaaaaggaacag gatagtgaagtgagtgaggataccaaatcagaagaaaaggagactgaagagaacaaagaa ctcactgatacatgtaaagaaagagaaagtgatactgggaagaagaaagtagaacatgaa atttccgaaggaaatgttgccacagccgcagcagctgctcttgcctcagcggctaccaaa gccaagcacctggctgcagtggaagaaagaaagatcaagtccctggtagctctcttggtt gagacacaaatgaagaaactagagatcaaacttcgacattttgaagagctggaaactatc atggacagagagaaagaagctctagaacaacagaggcagcagttgcttactgaacgccaa aacttccacatggaacagctgaagtatgctgaattacgagcacgacagcaaatggaacag cagcagcatggccagaaccctcaacaggcacaccagcactcaggaggacctggcctggcc ccacttggagcagcagggcaccctggcatgatgcctcatcaacagccccctccctaccct ctgatgcaccaccagatgccaccacctcatccaccccagccaggtcagataccaggccca ggttccatgatgcccgggcagcacatgccaggccgcatgattcccactgttgcagccaac atccacccctctgggagtggccctacccctcctggcatgccaccaatgccaggaaacatc ttaggaccccgggtacccctgacagcacctaacggcatgtatccccctccaccacagcag cagccaccgccaccaccacctgcagatggggtccctccgcctcctgctcctggcccgcca gcctcagctgctccttag |
Protein Sequence |
>6599 : length: 1105 MAAAAGGGGPGTAVGATGSGIAAAAAGLAVYRRKDGGPATKFWESPETVSQLDSVRVWLG KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGALCH ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKL ANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQDDEEWLRPVMRKEKQVLVHWGFYPDSY DTWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRI STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKKDSENTPVKGGTVADLDEQDEETVTAGG KEDEDPAKGDQSRSVDLGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPVDLQNFG LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK MEADPDGQQPEKAENKVENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKE LTDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ QQHGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP GSMMPGQHMPGRMIPTVAANIHPSGSGPTPPGMPPMPGNILGPRVPLTAPNGMYPPPPQQ QPPPPPPADGVPPPPAPGPPASAAP |