General information | Literature | Expression | Regulation | Variant | Interaction |
Basic Information |
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Gene ID | 6599 |
Name | SMARCC1 |
Synonymous | BAF155|CRACC1|Rsc8|SRG3|SWI3;SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1;SMARCC1;SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 |
Definition | BRG1-associated factor 155|SWI/SNF complex 155 kDa subunit|SWI/SNF complex subunit SMARCC1|SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member 1|chromatin remodeling complex BAF155 subunit|mammalian chromatin remode |
Position | 3p21.31 |
Gene Type | protein-coding |
Gene Regulation: | Upstream microRNAs Transcription Factors Post Transcriptional Modification From dbPTM Methylation Profile From DiseaseMeth database |
Experimentally verified miRNA from miRTarBase [Top] |
Transcription Factors [Top] |
Regulation From TransFac database |
BRG1(h) + hdac2(h) + RbAp48(h) + BAF155(h) + BAF60A(h) + sin3a(h) <==> BRG1(h):hdac2(h):RbAp48(h):BAF155(h):BAF60A(h):sin3a(h) (binding) | Brm(h) + HDAC1(h) + hdac2(h) + RbAp48(h) + BAF155(h) + BAF60A(h) + sin3a(h) <==> Brm(h):HDAC1(h):hdac2(h):RbAp48(h):BAF155(h):BAF60A(h):sin3a(h) (binding) | BAF47(h) + BAF155(h) + BRG1(h) + p53(h) <==> BAF47(h):BAF155(h):BRG1(h):p53(h) (binding) | LAP*-NF-M(c) + BAF155(h) <==> LAP*-NF-M(c):BAF155(h) (binding) | ER-alpha(h) + BAF155(h) <==> ER-alpha(h):BAF155(h) (binding) | BAF47(h) + BAF155(h) + BAF170(h) + Brm(h) + BRG1(h) + MCPH1(m.s.) <==> BAF47(h):BAF155(h):BAF170(h):Brm(h):BRG1(h):MCPH1(m.s.) (binding) | BAF155(h) + MCPH1(m.s.) <==> BAF155(h):MCPH1(m.s.) (binding) | BAF155(h) + Brm(h) + MCPH1(m.s.) <==> BAF155(h):Brm(h):MCPH1(m.s.) (binding) | BAF47(h) + Brm(h) + BRG1(h) + BAF155(h) + BAF170(h) <==> BAF47(h):Brm(h):BRG1(h):BAF155(h):BAF170(h) (binding) | BAF47(h) + BAF53a(h) + BAF155(h) + BAF170(h) + RbAp48(h) + RbAp46(h) + hdac2(h) + sin3a(h) + ING2(h) <==> BAF47(h):BAF53a(h):BAF155(h):BAF170(h):RbAp48(h):RbAp46(h):hdac2(h):sin3a(h):ING2(h) (binding) | SMARCC1(h) --> BAF155(h) (expression). | BAF155(h) + BAF57(h) <==> BAF155(h):BAF57(h) (binding) | SMARCC1(h) --> BAF155(h) (expression). |
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Post Transcriptional Modification [Top] | |||
Location (AA) |
PTM type |
Literature |
Database |
310 | Phosphoserine. | Swiss-Prot 53.0 | 328 | Phosphoserine. | Swiss-Prot 53.0 | 330 | Phosphoserine. | Swiss-Prot 53.0 | 395 | Phosphoserine | 15302935 | Phospho.ELM 6.0 | 328 | Phosphoserine | 15144186;16083285;17081983 | Phospho.ELM 6.0 | 330 | Phosphoserine | 15144186;16083285;17081983 | Phospho.ELM 6.0 | 335 | Phosphothreonine | 16083285 | Phospho.ELM 6.0 | 310 | Phosphoserine | 17081983 | Phospho.ELM 6.0 |
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Methylation Profile [Top] | ||
Chromosome |
Location |
Source |
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chr3 |
Promoter: 47797910 - 47799910 | Agilent_014791 |
chr3 |
Promoter: 47797910 - 47799910 | GSE27584 |
chr3 |
Promoter: 47797910 - 47799910 | Agilent_014791_44K |
chr3 |
Promoter: 47797910 - 47799910 | Agilent_014791 |