Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

51720

Name

UIMC1

Synonymous

ubiquitin interaction motif containing 1;UIMC1;ubiquitin interaction motif containing 1

Definition

BRCA1-A complex subunit RAP80|receptor associated protein 80|receptor-associated protein 80|retinoid X receptor-interacting protein 110|retinoid x receptor interacting protein|ubiquitin interaction motif-containing protein 1

Position

5q35.2

Gene Type

protein-coding

Mutation summary:

Mutations in domains
Mutational pattern in 17 major cancer types
LoF vs missense mutations
All the copy number variations from COSMIC database V72
All the mutations from COSMIC database V72

Mutation summary in protein domains

Top

We used uniprot protein structure data from ensemble BioMart database. The size of circle shows the relative mutation number.

The non-synonymous (top) and synonymous (bottom) mutational percentage for various cancers

Top

The non-synonymous mutational pattern in 17 major cancer types.
The synonymous mutational pattern in 17 major cancer types.

Loss of Function mutations compare to missense mutations

Top

Loss of Function mutations compare to missense mutation.
The ratio of the loss-of-function mutations over missense mutations is 0.13.

The copy number variations for various cancers

Top

The copy number variations in 17 major cancer groups: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; NS, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

The copy number variations in 17 major cancer types: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; Not specific, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

COSMIC somatic mutation [Top]

Mutation (CDS; AA; Chr)

Site

Histology

Mutation Type

c.232C>T; p.Q78*; 5:176975396-176975396

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Nonsense

c.1744T>C; p.C582R; 5:176908627-176908627

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.2052C>T; p.S684S; 5:176905390-176905390

skinmalignant_melanomaSubstitution - coding silent

c.1225A>C; p.T409P; 5:176958130-176958130

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.1670T>C; p.I557T; 5:176911317-176911317

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.803A>G; p.Q268R; 5:176968952-176968952

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.1029T>G; p.S343R; 5:176968726-176968726

ovarycarcinoma; serous_carcinomaSubstitution - Missense

c.286G>A; p.A96T; 5:176970813-176970813

NSmalignant_melanomaSubstitution - Missense

c.1175A>G; p.E392G; 5:176968580-176968580

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.350G>T; p.S117I; 5:176970749-176970749

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.1231G>A; p.E411K; 5:176958124-176958124

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.1054G>T; p.D352Y; 5:176968701-176968701

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.1942G>T; p.A648S; 5:176906018-176906018

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.365G>T; p.R122L; 5:176969699-176969699

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.180G>T; p.T60T; 5:176975448-176975448

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.1556G>A; p.R519Q; 5:176943376-176943376

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.312G>A; p.E104E; 5:176970787-176970787

livercarcinomaSubstitution - coding silent

c.312G>A; p.E104E; 5:176970787-176970787

stomachcarcinoma; adenocarcinomaSubstitution - coding silent

c.131C>T; p.S44F; 5:176982485-176982485

skinmalignant_melanomaSubstitution - Missense

c.312G>A; p.E104E; 5:176970787-176970787

livercarcinoma; hepatocellular_carcinomaSubstitution - coding silent

c.1620G>A; p.E540E; 5:176911367-176911367

lung; right_upper_lobecarcinoma; adenocarcinomaSubstitution - coding silent

c.1555C>T; p.R519*; 5:176943377-176943377

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Nonsense

c.461A>G; p.E154G; 5:176969603-176969603

breastcarcinomaSubstitution - Missense

c.1492T>A; p.S498T; 5:176943440-176943440

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.1344C>A; p.T448T; 5:176951573-176951573

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; acute_myeloid_leukaemiaSubstitution - coding silent

c.2011C>T; p.R671C; 5:176905431-176905431

lungcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.175A>C; p.K59Q; 5:176975453-176975453

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.143G>A; p.G48E; 5:176982473-176982473

skinmalignant_melanomaSubstitution - Missense

c.2074T>C; p.L692L; 5:176905368-176905368

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - coding silent

c.508_509delAT; p.I170fs*7; 5:176969246-176969247

endometriumcarcinoma; endometrioid_carcinomaDeletion - Frameshift

c.81T>C; p.S27S; 5:176982535-176982535

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.41C>A; p.S14Y; 5:176982575-176982575

ovaryother; neoplasmSubstitution - Missense

c.364C>T; p.R122W; 5:176969700-176969700

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - Missense

c.747T>C; p.G249G; 5:176969008-176969008

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.364C>T; p.R122W; 5:176969700-176969700

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.1912G>A; p.D638N; 5:176907114-176907114

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.2034C>A; p.P678P; 5:176905408-176905408

prostatecarcinoma; adenocarcinomaSubstitution - coding silent

c.2103C>T; p.V701V; 5:176905339-176905339

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - coding silent

c.1643G>T; p.G548V; 5:176911344-176911344

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.90G>A; p.V30V; 5:176982526-176982526

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - coding silent

c.463+4T>A; p.?; 5:176969597-176969597

ovaryother; neoplasmUnknown

c.419C>T; p.S140F; 5:176969645-176969645

skinmalignant_melanomaSubstitution - Missense

c.1147A>C; p.S383R; 5:176968608-176968608

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.77G>C; p.S26T; 5:176982539-176982539

lungcarcinoma; small_cell_carcinomaSubstitution - Missense

c.41C>T; p.S14F; 5:176982575-176982575

urinary_tract; bladdercarcinomaSubstitution - Missense

c.1531T>C; p.C511R; 5:176943401-176943401

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.1391C>T; p.P464L; 5:176951526-176951526

skinmalignant_melanomaSubstitution - Missense

c.754_755insG; p.D252fs*4; 5:176969000-176969001

large_intestine; coloncarcinoma; adenocarcinomaInsertion - Frameshift

c.1094G>A; p.R365K; 5:176968661-176968661

kidneycarcinoma; papillary_renal_cell_carcinomaSubstitution - Missense

c.991C>T; p.L331L; 5:176968764-176968764

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - coding silent

c.510C>G; p.I170M; 5:176969245-176969245

urinary_tract; bladdercarcinomaSubstitution - Missense

c.1786G>A; p.G596R; 5:176908585-176908585

skin; mucosalmalignant_melanomaSubstitution - Missense

c.1871G>T; p.R624L; 5:176907155-176907155

lungcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.1871G>T; p.R624L; 5:176907155-176907155

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.1813G>C; p.E605Q; 5:176908558-176908558

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; mantle_cell_lymphomaSubstitution - Missense

c.1898A>G; p.E633G; 5:176907128-176907128

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.1910C>T; p.S637L; 5:176907116-176907116

skinmalignant_melanomaSubstitution - Missense

c.2106G>T; p.Q702H; 5:176905336-176905336

autonomic_ganglianeuroblastomaSubstitution - Missense

c.80C>A; p.S27Y; 5:176982536-176982536

ovarycarcinoma; serous_carcinomaSubstitution - Missense

c.1979G>A; p.G660D; 5:176905463-176905463

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.1304C>T; p.P435L; 5:176955994-176955994

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.522C>T; p.N174N; 5:176969233-176969233

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.142G>A; p.G48R; 5:176982474-176982474

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.142G>A; p.G48R; 5:176982474-176982474

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.899T>C; p.L300S; 5:176968856-176968856

skinmalignant_melanomaSubstitution - Missense

c.1926G>T; p.K642N; 5:176906034-176906034

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.1125T>C; p.D375D; 5:176968630-176968630

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.1492T>G; p.S498A; 5:176943440-176943440

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.2033C>T; p.P678L; 5:176905409-176905409

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.1471G>A; p.E491K; 5:176943461-176943461

urinary_tract; bladdercarcinomaSubstitution - Missense

c.257C>G; p.A86G; 5:176970842-176970842

oesophagus; lower_thirdcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.1561G>A; p.A521T; 5:176943371-176943371

lung; right_upper_lobecarcinoma; adenocarcinomaSubstitution - Missense

c.592T>A; p.S198T; 5:176969163-176969163

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.365G>A; p.R122Q; 5:176969699-176969699

ovarycarcinoma; serous_carcinomaSubstitution - Missense

c.365G>A; p.R122Q; 5:176969699-176969699

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.1129C>T; p.Q377*; 5:176968626-176968626

skin; mucosalmalignant_melanomaSubstitution - Nonsense

c.885C>T; p.V295V; 5:176968870-176968870

lungcarcinoma; small_cell_carcinomaSubstitution - coding silent

c.413C>T; p.P138L; 5:176969651-176969651

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.198T>C; p.N66N; 5:176975430-176975430

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - coding silent

c.1920C>T; p.D640D; 5:176906040-176906040

stomachcarcinoma; adenocarcinomaSubstitution - coding silent

c.228C>T; p.I76I; 5:176975400-176975400

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.1654C>T; p.Q552*; 5:176911333-176911333

pancreascarcinomaSubstitution - Nonsense

c.228C>T; p.I76I; 5:176975400-176975400

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.144A>G; p.G48G; 5:176982472-176982472

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.720T>C; p.G240G; 5:176969035-176969035

skinmalignant_melanomaSubstitution - coding silent

c.144A>G; p.G48G; 5:176982472-176982472

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.144A>G; p.G48G; 5:176982472-176982472

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.1654C>T; p.Q552*; 5:176911333-176911333

pancreascarcinoma; ductal_carcinomaSubstitution - Nonsense

c.1676+1G>A; p.?; 5:176911310-176911310

ovarycarcinoma; serous_carcinomaUnknown

c.2129A>T; p.K710I; 5:176905313-176905313

lungcarcinoma; adenocarcinomaSubstitution - Missense

c.521A>T; p.N174I; 5:176969234-176969234

skinmalignant_melanomaSubstitution - Missense

c.640G>A; p.V214I; 5:176969115-176969115

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.1683G>T; p.E561D; 5:176908688-176908688

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.2112T>C; p.G704G; 5:176905330-176905330

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - coding silent

c.2049T>G; p.V683V; 5:176905393-176905393

skinmalignant_melanomaSubstitution - coding silent

c.1505A>C; p.Q502P; 5:176943427-176943427

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.739G>T; p.V247F; 5:176969016-176969016

prostatecarcinoma; adenocarcinomaSubstitution - Missense

c.1323A>G; p.E441E; 5:176955975-176955975

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - coding silent

c.1297C>T; p.L433F; 5:176956001-176956001

skinmalignant_melanomaSubstitution - Missense


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