Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

5601

Name

MAPK9

Synonymous

mitogen-activated protein kinase 9;MAPK9;mitogen-activated protein kinase 9

Definition

Jun kinase|MAP kinase 9|MAPK 9|c-Jun N-terminal kinase 2|c-Jun kinase 2|stress-activated protein kinase 1a|stress-activated protein kinase JNK2

Position

5q35

Gene Type

protein-coding

Mutation summary:

Mutations in domains
Mutational pattern in 17 major cancer types
LoF vs missense mutations
All the copy number variations from COSMIC database V72
All the mutations from COSMIC database V72

Mutation summary in protein domains

Top

We used uniprot protein structure data from ensemble BioMart database. The size of circle shows the relative mutation number.

The non-synonymous (top) and synonymous (bottom) mutational percentage for various cancers

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The non-synonymous mutational pattern in 17 major cancer types.
The synonymous mutational pattern in 17 major cancer types.

Loss of Function mutations compare to missense mutations

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Loss of Function mutations compare to missense mutation.
The ratio of the loss-of-function mutations over missense mutations is 0.13.

The copy number variations for various cancers

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The copy number variations in 17 major cancer groups: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; NS, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

The copy number variations in 17 major cancer types: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; Not specific, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

COSMIC somatic mutation [Top]

Mutation (CDS; AA; Chr)

Site

Histology

Mutation Type

c.565C>T; p.R189W; 5:180249024-180249024

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.578C>T; p.A193V; 5:180249011-180249011

lungcarcinoma; small_cell_carcinomaSubstitution - Missense

c.578C>T; p.A193V; 5:180249011-180249011

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.199G>A; p.A67T; 5:180269333-180269333

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.74G>A; p.R25H; 5:180280488-180280488

prostatecarcinomaSubstitution - Missense

c.166A>G; p.K56E; 5:180269366-180269366

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.166A>G; p.K56E; 5:180269366-180269366

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.1019C>T; p.A340V; 5:180239965-180239965

lungcarcinoma; adenocarcinomaSubstitution - Missense

c.939C>T; p.D313D; 5:180241088-180241088

stomachcarcinoma; adenocarcinomaSubstitution - coding silent

c.926G>A; p.R309Q; 5:180241101-180241101

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.1086T>C; p.D362D; 5:180238378-180238378

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.831T>G; p.D277E; 5:180242613-180242613

stomachcarcinoma; diffuse_adenocarcinomaSubstitution - Missense

c.104G>A; p.G35E; 5:180280458-180280458

livercarcinomaSubstitution - Missense

c.104G>A; p.G35E; 5:180280458-180280458

livercarcinomaSubstitution - Missense

c.104G>A; p.G35E; 5:180280458-180280458

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.822C>A; p.L274L; 5:180242622-180242622

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.292C>G; p.L98V; 5:180264800-180264800

lungcarcinoma; adenocarcinomaSubstitution - Missense

c.1043C>T; p.A348V; 5:180239941-180239941

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.947T>C; p.L316P; 5:180241080-180241080

stomachcarcinoma; intestinal_adenocarcinomaSubstitution - Missense

c.312-6C>T; p.?; 5:180261828-180261828

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; acute_lymphoblastic_leukaemiaUnknown

c.445C>A; p.H149N; 5:180261689-180261689

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.574C>T; p.R192W; 5:180249015-180249015

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.312-7C>T; p.?; 5:180261829-180261829

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; acute_lymphoblastic_leukaemiaUnknown

c.856C>T; p.R286*; 5:180242588-180242588

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Nonsense

c.829G>T; p.D277Y; 5:180242615-180242615

livercarcinoma; hepatocellular_carcinomaSubstitution - Missense

c.687C>T; p.D229D; 5:180247440-180247440

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - coding silent

c.37G>A; p.V13M; 5:180280525-180280525

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.37G>A; p.V13M; 5:180280525-180280525

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.1048G>T; p.E350*; 5:180239936-180239936

urinary_tract; bladdercarcinomaSubstitution - Nonsense

c.103G>A; p.G35R; 5:180280459-180280459

central_nervous_system; brainglioma; astrocytoma_Grade_IVSubstitution - Missense

c.325G>A; p.E109K; 5:180261809-180261809

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.43G>C; p.V15L; 5:180280519-180280519

urinary_tract; bladdercarcinomaSubstitution - Missense

c.920A>G; p.D307G; 5:180241107-180241107

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.271G>A; p.V91M; 5:180264821-180264821

central_nervous_system; brainglioma; astrocytoma_Grade_IVSubstitution - Missense

c.528G>A; p.A176A; 5:180249061-180249061

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; acute_myeloid_leukaemiaSubstitution - coding silent

c.20A>G; p.D7G; 5:180280542-180280542

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - Missense

c.667G>A; p.V223M; 5:180247460-180247460

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.543G>A; p.M181I; 5:180249046-180249046

skinmalignant_melanomaSubstitution - Missense

c.1078G>C; p.V360L; 5:180238386-180238386

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.189C>A; p.N63K; 5:180269343-180269343

urinary_tract; bladdercarcinomaSubstitution - Missense

c.679G>T; p.G227C; 5:180247448-180247448

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.679G>T; p.G227C; 5:180247448-180247448

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.679G>T; p.G227C; 5:180247448-180247448

large_intestine; coloncarcinomaSubstitution - Missense

c.679G>T; p.G227C; 5:180247448-180247448

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.872-2A>T; p.?; 5:180241157-180241157

lung; right_upper_lobecarcinoma; adenocarcinomaUnknown

c.826C>T; p.P276S; 5:180242618-180242618

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.527C>T; p.A176V; 5:180249062-180249062

central_nervous_system; braingliomaSubstitution - Missense

c.616G>A; p.V206I; 5:180248973-180248973

urinary_tract; bladdercarcinomaSubstitution - Missense

c.610G>A; p.E204K; 5:180248979-180248979

urinary_tract; bladdercarcinomaSubstitution - Missense

c.575G>A; p.R192Q; 5:180249014-180249014

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.128C>T; p.A43V; 5:180269404-180269404

skin; extremitymalignant_melanomaSubstitution - Missense

c.807C>G; p.I269M; 5:180242637-180242637

oesophaguscarcinoma; adenocarcinomaSubstitution - Missense

c.744C>A; p.F248L; 5:180242700-180242700

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.997-2A>T; p.?; 5:180239989-180239989

livercarcinoma; hepatocellular_carcinomaUnknown

c.681C>T; p.G227G; 5:180247446-180247446

large_intestinecarcinoma; adenocarcinomaSubstitution - coding silent

c.799C>T; p.P267S; 5:180242645-180242645

skinmalignant_melanomaSubstitution - Missense

c.662delG; p.G221fs*3; 5:180247465-180247465

lungcarcinoma; adenocarcinomaDeletion - Frameshift

c.199delG; p.A67fs*11; 5:180269333-180269333

lungcarcinoma; adenocarcinomaDeletion - Frameshift

c.273G>T; p.V91V; 5:180264819-180264819

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.1123C>T; p.Q375*; 5:180238341-180238341

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Nonsense

c.347G>A; p.C116Y; 5:180261787-180261787

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.199_200delGC; p.A67fs*6; 5:180269332-180269333

lungcarcinoma; adenocarcinomaDeletion - Frameshift

c.363G>A; p.M121I; 5:180261771-180261771

skinmalignant_melanomaSubstitution - Missense

c.907G>C; p.V303L; 5:180241120-180241120

lungcarcinoma; adenocarcinomaSubstitution - Missense

c.214C>T; p.R72C; 5:180269318-180269318

skinmalignant_melanomaSubstitution - Missense

c.311+3A>G; p.?; 5:180264778-180264778

livercarcinomaUnknown

c.311+3A>G; p.?; 5:180264778-180264778

livercarcinomaUnknown

c.949C>T; p.R317C; 5:180241078-180241078

lungcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.168A>G; p.K56K; 5:180269364-180269364

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - coding silent

c.596G>A; p.G199D; 5:180248993-180248993

haematopoietic_and_lymphoid_tissuelymphoid_neoplasm; chronic_lymphocytic_leukaemia-small_lymphocytic_lymphomaSubstitution - Missense

c.1006C>T; p.Q336*; 5:180239978-180239978

lungcarcinoma; adenocarcinomaSubstitution - Nonsense

c.103G>T; p.G35W; 5:180280459-180280459

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - Missense

c.752A>C; p.K251T; 5:180242692-180242692

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.34A>T; p.S12C; 5:180280528-180280528

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; acute_myeloid_leukaemiaSubstitution - Missense

c.954C>G; p.H318Q; 5:180241073-180241073

autonomic_ganglianeuroblastomaSubstitution - Missense

c.161T>A; p.V54D; 5:180269371-180269371

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.253-1G>A; p.?; 5:180264840-180264840

large_intestine; coloncarcinoma; adenocarcinomaUnknown

c.167A>G; p.K56R; 5:180269365-180269365

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.168A>T; p.K56N; 5:180269364-180269364

upper_aerodigestive_tract; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.168A>T; p.K56N; 5:180269364-180269364

upper_aerodigestive_tract; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.167A>G; p.K56R; 5:180269365-180269365

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.925C>T; p.R309W; 5:180241102-180241102

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.857G>A; p.R286Q; 5:180242587-180242587

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.501C>T; p.I167I; 5:180249088-180249088

breastcarcinomaSubstitution - coding silent


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