Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

4851

Name

NOTCH1

Synonymous

AOS5|AOVD1|TAN1|hN1;notch 1;NOTCH1;notch 1

Definition

Notch homolog 1, translocation-associated|neurogenic locus notch homolog protein 1|translocation-associated notch protein TAN-1

Position

9q34.3

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

Notch1(h) --/ E47(h) (decrease of abundance)
Notch1(h) --> ERK1(m){p} (increase of phosphorylation)
Notch1(h) --> ERK2(m){p} (increase of phosphorylation)
Notch1(h) --> E47(h){ub(n)} (increase of ubiquitination)
Notch1(h) --> E47(h){p}:Skp2(h) (increase of binding)
Notch1(h) --> ERK1(h){p} (increase of phosphorylation)
Notch1(h) --> ERK2(h){p} (increase of phosphorylation)
Notch1(h) --/ E2A(m) (decrease of abundance)
Notch1(h) --/ E2A(h) (decrease of abundance)
Notch1(h) --> Notch1-p82(h) + protein remnants (cleavage)
Notch1(h) --> Notch1-p77(h) + protein remnants (cleavage)
Notch1(h) --> Notch1-p70(h) + protein remnants (cleavage)
Notch1(h) --> Notch1-p48(h) + protein remnants (cleavage)
Notch1(h) --> Notch1-p45(h) + protein remnants (cleavage)
Notch1(h) --> Notch1-p40(h) + protein remnants (cleavage)
Notch1(h) --> Notch1-p32(h) + protein remnants (cleavage)
Notch1(h) --> Notch1-p28(h) + protein remnants (cleavage)
Notch1(h) --> Notch1-p22(h) + protein remnants (cleavage)
Notch1(h) --> KRT1(h) (transactivation)
NOTCH1(h) --> Notch1(h) (expression).
Jagged1(h) --/ Notch1(h) (decrease of abundance)
EGF(m.s.) --/ Notch1(h) (decrease of abundance)
ErbB1(h) --/ Notch1(h) (decrease of abundance)
c-Jun(h) --/ Notch1(h) (decrease of abundance)
Notch1(h) --> NICD1(h) + protein remnants (cleavage)
Notch1(h) --> Notch1TM(h) + Notch1EC(h) (cleavage)
Notch1(h) --> PTEN(h) (DNA binding; transactivation).
NOTCH1(h) --> Notch1(h) (expression).
NOTCH1(h) --> NOTCH1(h) (expression).
hsa-miR-134 --/ NOTCH1(h) (predicted)
hsa-miR-34a --/ NOTCH1(h) (predicted)
hsa-miR-34c --/ NOTCH1(h) (predicted)

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

41N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
960N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1180N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1242N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1490N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1588N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr9

Promoter: 138559559 - 138561559Agilent_014791

chr9

Promoter: 138559559 - 138561559GoldenGate_Methylation_Cancer_Panel_I

chr9

Promoter: 138559559 - 138561559GSE27584

chr9

Promoter: 138559559 - 138561559Agilent_014791_44K


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