Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

4916

Name

NTRK3

Synonymous

GP145-TrkC|TRKC|gp145(trkC);neurotrophic tyrosine kinase, receptor, type 3;NTRK3;neurotrophic tyrosine kinase, receptor, type 3

Definition

ETS related protein-neurotrophic receptor tyrosine kinase fusion protein|ETV6-NTRK3 fusion|NT-3 growth factor receptor|tyrosine kinase receptor C

Position

15q25

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

trkC(h) + DOK5(m.s.) <==> trkC(h):DOK5(m.s.) (binding)
trkC(h) + ATP --> trkC(h){pY} + ADP (phosphorylation; automodification)
Tamalin(m) + trkC(h) <==> Tamalin(m):trkC(h) (binding)
Tamalin(m) + trkC(h) <==> Tamalin(m):trkC(h) (binding)
trkC(h) + Src(h) <==> trkC(h):Src(h) (binding)
NTRK3(h) --> trkC(h) (expression).
NTRK3(h) --> trkC(h) (expression).

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

72N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
79N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
133N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
163N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
203N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
218N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
232N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
259N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
267N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
272N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
294N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
375N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
388N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
516Phosphotyrosine (by autocatalysis) (Bysimilarity).Swiss-Prot 53.0
705Phosphotyrosine (by autocatalysis) (Bysimilarity).Swiss-Prot 53.0
709Phosphotyrosine (by autocatalysis) (Bysimilarity).Swiss-Prot 53.0
710Phosphotyrosine (by autocatalysis) (Bysimilarity).Swiss-Prot 53.0
834Phosphotyrosine (By similarity).Swiss-Prot 53.0
516Phosphotyrosine11877382Phospho.ELM 6.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr15

Promoter: 86600165 - 86602165Agilent_014791

chr15

Promoter: 86600165 - 86602165GoldenGate_Methylation_Cancer_Panel_I

chr15

Promoter: 86600165 - 86602165GoldenGate_Methylation_Cancer_Panel_I

chr15

Promoter: 86600165 - 86602165GoldenGate_Methylation_Cancer_Panel_I

chr15

Promoter: 86600165 - 86602165GSE27584

chr15

Promoter: 86600165 - 86602165GSE27584

chr15

Promoter: 86600165 - 86602165GSE27584

chr15

Promoter: 86600165 - 86602165Agilent_014791_44K

chr15

Promoter: 86600165 - 86602165Agilent_014791_44K

chr15

Promoter: 86600165 - 86602165Agilent_014791_44K


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