Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

5580

Name

PRKCD

Synonymous

ALPS3|CVID9|MAY1|PKCD|nPKC-delta;protein kinase C, delta;PRKCD;protein kinase C, delta

Definition

protein kinase C delta VIII|protein kinase C delta type|tyrosine-protein kinase PRKCD

Position

3p21.31

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

DNA-PKcs(h) + PKCdelta(h) <==> DNA-PKcs(h):PKCdelta(h) (binding)
PKCdelta(h) --Caspase-3(h)--> PKCdelta-CF(h) + protein remnants (processing)
p73beta(h) + PKCdelta(h) <==> p73beta(h):PKCdelta(h) (binding)
Abl(m.s.) + PKCdelta(h) <==> Abl(m.s.):PKCdelta(h) (binding)
PKCdelta(h) + ATP --> PKCdelta(h){pS660} + ADP (phosphorylation; automodification)
PKCdelta(h) + PKCalpha(h) <==> PKCdelta(h):PKCalpha(h) (binding)
PKCdelta(h) + proCaspase-3(h) <==> PKCdelta(h):proCaspase-3(h) (binding)
PKCdelta(h) --Caspase-3(h)--> PKCdelta-p40(h) + protein remnants (cleavage)
Abl(h) + PKCdelta(h) <==> Abl(h):PKCdelta(h) (binding)
PKCdelta(h) + Bcl-X(h) <==> PKCdelta(h):Bcl-X(h) (binding)
PKCdelta(h) + ATP --> PKCdelta(h){pY} + ADP (phosphorylation)
PKCdelta(h) + ATP --Abl(h)--> PKCdelta(h){pY311} + ADP (phosphorylation)
p53(h) + PKCdelta(h) <==> p53(h):PKCdelta(h) (binding)
PKCdelta(h) + p53DINP1(h) <==> PKCdelta(h):p53DINP1(h) (binding)
PKCdelta(h) --> PKCdelta(h) (translocation)
PKCdelta(h) + IKK-alpha(h) <==> PKCdelta(h):IKK-alpha(h) (binding)
PKCdelta(h) + ATP --> PKCdelta(h){pT507} + ADP (phosphorylation)
PKCdelta(h) --> c-Jun(h){p} (increase of phosphorylation)
PKCdelta(h) + Lyn(h) <==> PKCdelta(h):Lyn(h) (binding)
PKCdelta(h) + MEKK1(h) <==> PKCdelta(h):MEKK1(h) (binding)
Prkcm(h) + PKCdelta(h) <==> Prkcm(h):PKCdelta(h) (binding)
PKCdelta(h) + ATP --> PKCdelta(h){pS645} + ADP (phosphorylation)
PKCdelta(h) + ATP --> PKCdelta(h){p} + ADP (phosphorylation)
fTnT(r) + PKCdelta(h) <==> fTnT(r):PKCdelta(h) (binding)
STAT1(h) + PKCdelta(h) <==> STAT1(h):PKCdelta(h) (binding)
PKCdelta(h) --> PKCdelta-p40(h) + protein remnants (cleavage)
PRKCD(h) --> PKCdelta(h) (expression).
PKCdelta(h) --> PKCdelta(h) (translocation)
phlpp1(h) --/ PKCdelta(h) (decrease of abundance)
phlpp2(h) --/ PKCdelta(h) (decrease of abundance)
cTnI(b):cTnT(b):TNNC(b) + 2 ATP --PKCdelta(h)--> cTnT(b){p}:cTnI(b){p}:TNNC(b) + 2 ADP (phosphorylation)
cTnI(b) + 2 ATP --PKCdelta(h)--> cTnI(b){pS78}{pT144} + 2 ADP (phosphorylation)
cTnT(b) + 3 ATP --PKCdelta(h)--> cTnT(b){pS194}{pT199}{pT280} + 3 ADP (phosphorylation)
cTnI(m) + 3 ATP --PKCdelta(h)--> cTnI(m){pS43}{pS45}{pT144} + 3 ADP (phosphorylation)
cTnI(r) + 3 ATP --PKCdelta(h)--> cTnI(r){pS43}{pS45}{pT144} + 3 ADP (phosphorylation)
proCaspase-3(h) + ATP --PKCdelta(h)--> proCaspase-3(h){p} + ADP (phosphorylation)
p21Cip1(h) + ATP --PKCdelta(h)--> p21Cip1(h){pS146} + ADP (phosphorylation)
p53(h) + ATP --PKCdelta(h)--> p53(h){pS46} + ADP (phosphorylation)
histone H1(m.s.) + ATP --PKCdelta(h)--> histone H1(m.s.){p} + ADP (phosphorylation)
STAT1(m.s.) + ATP --PKCdelta(h)--> STAT1(m.s.){pS727} + ADP (phosphorylation)
PRKCD(h) --> PKCdelta-xbb1(h) (expression).
histone H3(m.s.) + ATP --PKCdelta-xbb1(h)--> histone H3(m.s.){pT46} + ADP (phosphorylation)
PKCdelta(h) --> Cdk2(m.s.):p21Cip1(h) (decrease of binding)
PKCdelta(h) --> Cdk2(h):p21Cip1(h) (decrease of binding)
PKCdelta(h) + p53(h) <==> PKCdelta(h):p53(h) (binding)
PKCdelta(h) + p53DINP1(m.s.) <==> PKCdelta(h):p53DINP1(m.s.) (binding)
PKCdelta(h) + IKK-alpha(m.s.) <==> PKCdelta(h):IKK-alpha(m.s.) (binding)
PKCdelta(h) --> IKK-alpha(m.s.){p} (increase of phosphorylation)
PKCdelta(h) + PKD2(h) <==> PKCdelta(h):PKD2(h) (binding)
PKCdelta(h) + trim41-isoform2(h) <==> PKCdelta(h):trim41-isoform2(h) (binding)
PRKCD(h) --> PKCdelta(h) (expression).
p300(m.s.) + ATP --PKCdelta(h)--> p300(m.s.){pS89} + ADP (phosphorylation)
p21Cip1(h) + ATP --PKCdelta(h)--> p21Cip1(h){pS146} + ADP (phosphorylation)
p53(h) + ATP --PKCdelta(h)--> p53(h){pS46} + ADP (phosphorylation)
CYP7(h) + ATP --PKCdelta(h)--> CYP7(h){p} + ADP (phosphorylation)
STAT1(h) + ATP --PKCdelta(h)--> STAT1(h){pS727} + ADP (phosphorylation)
CLIC1(m.s.) + ATP --PKCdelta(h)--> CLIC1(m.s.){p} + ADP (phosphorylation)
CLIC4(m.s.) + ATP --PKCdelta(h)--> CLIC4(m.s.){p} + ADP (phosphorylation)

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

507Phosphothreonine (by PDPK1) (Bysimilarity).Swiss-Prot 53.0
645Phosphoserine (Potential).Swiss-Prot 53.0
664Phosphoserine.Swiss-Prot 53.0
187Phosphotyrosine96421649;15302935Phospho.ELM 6.0
507Phosphothreonine (PDK-1)9748166;15302935Phospho.ELM 6.0
52Phosphotyrosine15302935Phospho.ELM 6.0
64Phosphotyrosine15302935Phospho.ELM 6.0
155Phosphotyrosine15302935Phospho.ELM 6.0
313Phosphotyrosine15302935Phospho.ELM 6.0
645Phosphoserine15302935Phospho.ELM 6.0
664Phosphoserine15302935Phospho.ELM 6.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr3

Promoter: 53168763 - 53170763Agilent_014791

chr3

Promoter: 53168763 - 53170763GSE27584

chr3

Promoter: 53168763 - 53170763GSE27584

chr3

Promoter: 53168763 - 53170763Agilent_014791_44K

chr3

Promoter: 53168763 - 53170763Agilent_014791_44K


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