Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

5770

Name

PTPN1

Synonymous

PTP1B;protein tyrosine phosphatase, non-receptor type 1;PTPN1;protein tyrosine phosphatase, non-receptor type 1

Definition

protein tyrosine phosphatase, placental|protein-tyrosine phosphatase 1B|tyrosine-protein phosphatase non-receptor type 1

Position

20q13.1-q13.2

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

PTP1B(h) + Cas(h) <==> PTP1B(h):Cas(h) (binding)
PTP1B(h) --calpain-1(h)--> protein remnants + PTP1B-p42(h) (cleavage)
PTP1B(h) --calpain-2(h)--> protein remnants + PTP1B-p42(h) (cleavage)
Trpv6(r) + PTP1B(h) <==> Trpv6(r):PTP1B(h) (binding)
PTP1B(h) + ATP --Cdk1(m.s.)--> PTP1B(h){pS386} + ADP (phosphorylation)
PTP1B(h) + ATP --PKC(v.s.)--> PTP1B(h){pS378} + ADP (phosphorylation)
PTP1B(h) + ATP --AKT-1(m)--> PTP1B(h){pS50} + ADP (phosphorylation)
PTP1B(h) + InsR(h){pY} <==> PTP1B(h):InsR(h){pY} (binding)
PTP1B(h) + LAT(h){p} --> PTP1B(h):LAT(h) + p (dephosphorylation; binding)
PTP1B(h) --/ IGF1(h) (transrepression)
PTP1B(h) --/ IGF-1(h) (decrease of abundance)
PTP1B(h) --> STAT5(h){pY} (decrease of phosphorylation)
H2O2 --/ PTP1B(h) (inhibition)
superoxide --/ PTP1B(h) (inhibition)
PTPN1(h) --> PTP1B(h) (expression).
Crk-II(m.s.){pY221} --PTP1B(h)--> Crk-II(m.s.) + p (dephosphorylation)
Trpv6(r){pY} --PTP1B(h)--> Trpv6(r) + p (dephosphorylation)
Src(h){pY419}{pY530} --PTP1B(h)--> Src(h) + 2 p (dephosphorylation)
Src(h){pY530} --PTP1B(h)--> Src(h) + p (dephosphorylation)
InsR(h){pY} --PTP1B(h)--> InsR(h) + p (dephosphorylation)
IRS-1(h){pY} --PTP1B(h)--> IRS-1(h) + p (dephosphorylation)
Lck(m){pY} --PTP1B(h)--> Lck(m) + p (dephosphorylation)
LYZ(m.s.){pY} --PTP1B(h)--> p + LYZ(m.s.) (dephosphorylation)
Myosin-P-light chain(m.s.){pY} --PTP1B(h)--> p + Myosin-P-light chain(m.s.) (dephosphorylation)
Albumin(b){pY} --PTP1B(h)--> p + Albumin(b) (dephosphorylation)
MBP(m.s.){pY} --PTP1B(h)--> p + MBP(m.s.) (dephosphorylation)
PTPN1(h) --> PTP1B(h) (expression).
GHR(rb){pY} --PTP1B(h)--> GHR(rb) + p (dephosphorylation)
STAT5(h){pY} --PTP1B(h)--> STAT5(h) + p (dephosphorylation)
STAT3(h){pY} --PTP1B(h)--> STAT3(h) + p (dephosphorylation)

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

1N-acetylmethionine.Swiss-Prot 53.0
20Phosphotyrosine.Swiss-Prot 53.0
50Phosphoserine (by PKB/AKT1).Swiss-Prot 53.0
295Phosphoserine.Swiss-Prot 53.0
352Phosphoserine.Swiss-Prot 53.0
378Phosphoserine (by PKC).Swiss-Prot 53.0
386Phosphoserine (by CDC2).Swiss-Prot 53.0
393Phosphoserine (By similarity).Swiss-Prot 53.0
2154-amino-3-isothiazolidinone serine (Cys-Ser) (in inhibited form).Swiss-Prot 53.0
352Phosphoserine93259136Phospho.ELM 6.0
378Phosphoserine (PKC alpha;PK)93259136;8491187Phospho.ELM 6.0
66Phosphotyrosine (EGFR;InsR)11106648;8999839;9355745Phospho.ELM 6.0
152Phosphotyrosine (InsR)11106648Phospho.ELM 6.0
153Phosphotyrosine (InsR)11106648Phospho.ELM 6.0
20Phosphotyrosine15592455Phospho.ELM 6.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr20

Promoter: 48558798 - 48560798Agilent_014791

chr20

Promoter: 48558798 - 48560798GSE27584

chr20

Promoter: 48558798 - 48560798Agilent_014791_44K


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