Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

5934

Name

RBL2

Synonymous

P130|Rb2;retinoblastoma-like 2;RBL2;retinoblastoma-like 2

Definition

130 kDa retinoblastoma-associated protein|PRB2|RBR-2|retinoblastoma-like protein 2|retinoblastoma-related protein 2

Position

16q12.2

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

p130(h) + cyclinA(h):Cdk2(h) <==> p130(h):cyclinA(h):Cdk2(h) (binding)
p130(h) + cyclinE(h):Cdk2(h) <==> p130(h):cyclinE(h):Cdk2(h) (binding)
E1A(12S)(AD12) + p107(h) + p130(h) + pRb(h) + p300(h) <==> E1A(12S)(AD12):p300(h):pRb(h):p130(h):p107(h) (binding)
E2F-5(h):DP-1(h) + p130(h) <==> E2F-5(h):DP-1(h):p130(h) (binding)
p130(h) + E1A(12S)(AD12) <==> p130(h):E1A(12S)(AD12) (binding)
p130(h) + T-Ag(SV) <==> p130(h):T-Ag(SV) (binding)
p130(h) + cyclinA(h) <==> p130(h):cyclinA(h) (binding)
p130(h) + cyclinD(h) <==> p130(h):cyclinD(h) (binding)
p130(h) + cyclinE(h) <==> p130(h):cyclinE(h) (binding)
E2F-4(h) + p130(h) <==> E2F-4(h):p130(h) (binding)
E2F-4(h) + p130(h) + cyclinA(h):Cdk2(h) <==> E2F-4(h):p130(h):cyclinA(h):Cdk2(h) (binding)
p130(h) + p202(m) <==> p130(h):p202(m) (binding)
E2F-5(h) + p130(h) <==> E2F-5(h):p130(h) (binding).
PMX1(m) + p130(h) <==> PMX1(m):p130(h) (binding).
Alx-4(m) + p130(h) <==> Alx-4(m):p130(h) (binding).
CHX10(m) + p130(h) <==> CHX10(m):p130(h) (binding).
E2F-4(h):DP-1(h) + p130(h) <==> E2F-4(h):DP-1(h):p130(h) (binding)
Raf-1(h) + p130(h) <==> Raf-1(h):p130(h) (binding)
Pax-3(m) + p130(h) <==> Pax-3(m):p130(h) (binding).
p130(h) + E1A(AD) <==> p130(h):E1A(AD) (binding)
p300(h) + p130(h) + E2F-1(h) <==> p300(h):p130(h):E2F-1(h) (binding)
HDAC1(h) + p130(h) + E2F-4(h) <==> HDAC1(h):p130(h):E2F-4(h) (binding)
p130(h) + HDAC1(m.s.) <==> p130(h):HDAC1(m.s.) (binding)
p130(h) + RBBP1(h) <==> p130(h):RBBP1(h) (binding)
E2F-4(h) + p130(h) <==> E2F-4(h):p130(h) (binding)
Cdk2(h) + p130(h) <==> p130(h):Cdk2(h) (binding)
RBL2(h) --> p130(h) (expression).
RBL2(h) --> p130(h) (expression).
RBL2(h) --> RBL2(h) (expression).
hsa-miR-106a --/ RBL2(h) (predicted)
hsa-miR-106b --/ RBL2(h) (predicted)
hsa-miR-20a --/ RBL2(h) (predicted)
hsa-miR-20b --/ RBL2(h) (predicted)

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

413Phosphoserine (By similarity).Swiss-Prot 53.0
417Phosphothreonine (By similarity).Swiss-Prot 53.0
639Phosphoserine.Swiss-Prot 53.0
642Phosphothreonine (By similarity).Swiss-Prot 53.0
672Phosphoserine.Swiss-Prot 53.0
948Phosphoserine (By similarity).Swiss-Prot 53.0
952Phosphoserine.Swiss-Prot 53.0
966Phosphoserine.Swiss-Prot 53.0
971Phosphoserine (Probable).Swiss-Prot 53.0
972Phosphoserine (Probable).Swiss-Prot 53.0
973Phosphoserine (Probable).Swiss-Prot 53.0
974Phosphothreonine (Probable).Swiss-Prot 53.0
981Phosphoserine (Probable).Swiss-Prot 53.0
982Phosphoserine (Probable).Swiss-Prot 53.0
986Phosphothreonine.Swiss-Prot 53.0
639Phosphoserine (CDK2)11042701;11157749Phospho.ELM 6.0
952Phosphoserine (CDK2)11042701;11157749Phospho.ELM 6.0
966Phosphoserine11042701Phospho.ELM 6.0
986Phosphothreonine11042701Phospho.ELM 6.0
981Phosphoserine11042701Phospho.ELM 6.0
982Phosphoserine (CDK2)11042701;11157749Phospho.ELM 6.0
971Phosphoserine11042701Phospho.ELM 6.0
972Phosphoserine11042701Phospho.ELM 6.0
973Phosphoserine (CDK2)11042701;11157749Phospho.ELM 6.0
974Phosphothreonine11042701Phospho.ELM 6.0
948Phosphoserine11042701Phospho.ELM 6.0
401Phosphothreonine (CDK4;CDK6)11157749Phospho.ELM 6.0
672Phosphoserine (CDK4;CDK6)11157749Phospho.ELM 6.0
962Phosphoserine11157749Phospho.ELM 6.0
1035Phosphoserine (CDK4;CDK6)11157749Phospho.ELM 6.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr16

Promoter: 52024401 - 52026401Agilent_014791

chr16

Promoter: 52024401 - 52026401GoldenGate_Methylation_Cancer_Panel_I

chr16

Promoter: 52024401 - 52026401GSE27584

chr16

Promoter: 52024401 - 52026401Agilent_014791_44K


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