Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

7520

Name

XRCC5

Synonymous

KARP-1|KARP1|KU80|KUB2|Ku86|NFIV;X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining);XRCC5;X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)

Definition

86 kDa subunit of Ku antigen|ATP-dependent DNA helicase 2 subunit 2|ATP-dependent DNA helicase II 80 kDa subunit|CTC box-binding factor 85 kDa subunit|CTC85|CTCBF|DNA repair protein XRCC5|Ku autoantigen, 80kDa|Ku86 autoantigen related protein 1|TLAA|X-ray

Position

2q35

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

Ku80(h) + Polm(h) <==> Ku80(h):Polm(h) (binding)
Ku80(h) + Polm(h) <==> Ku80(h):Polm(h) (binding)
ASC-2(h) + Ku80(h) <==> ASC-2(h):Ku80(h) (binding)
Ku70(h) + Ku80(h) <==> Ku70(h):Ku80(h) (binding)
Ku80(h) + acetyl-CoA --> Ku80(h){aceK} + CoA (acetylation)
TERF2IP(h) + TRF2(h) + Mre11(h) + Ku70(h) + Ku80(h) + PARP(h) + Rad50(h) <==> TERF2IP(h):TRF2(h):Mre11(h):Ku70(h):Ku80(h):PARP(h):Rad50(h) (binding)
Ku80(h) + TRF2(h) <==> Ku80(h):TRF2(h) (binding)
Ku80(h) + TERF2IP(h) <==> Ku80(h):TERF2IP(h) (binding)
Ku80(h) + AR-isoform1(h) <==> Ku80(h):AR-isoform1(h) (binding)
DNA-PKcs(h) + Ku80(h) + Ku70(h) + AR(h) <==> DNA-PKcs(h):Ku80(h):Ku70(h):AR(h) (binding)
Ku80(h) --> ATP7B(h) (DNA binding).
Ku80(h) --> CYP1A1(h) (DNA binding).
TCF-4(h) + Ku80(h) <==> TCF-4(h):Ku80(h) (binding)
Ku80(h) + PARP(h) <==> Ku80(h):PARP(h) (binding)
Ku80(h) + CAPER-alpha(h) <==> Ku80(h):CAPER-alpha(h) (binding)
Ku80(h) --> NFKB1(h) (DNA binding).
Ku80(h) + ZEB1(h) <==> Ku80(h):ZEB1(h) (binding)
Ku80(h) --> XDH(h) (DNA binding).
Ku80(h) --> DIO1(h) (DNA binding).
XRCC5(h) --> Ku80(h) (expression).
PCNA(h) + Ku80(h) <==> PCNA(h):Ku80(h) (binding)
XRCC5(h) --> Ku80(h) (expression).

Post Transcriptional Modification   [Top]

There is no record for XRCC5

Methylation Profile   [Top]

Chromosome

Location

Source

chr2

Promoter: 216680877 - 216682877Agilent_014791

chr2

Promoter: 216680877 - 216682877GSE27584

chr2

Promoter: 216680877 - 216682877Agilent_014791_44K

chr2

Promoter: 216680877 - 216682877Agilent_014791

chr2

Promoter: 216680877 - 216682877PMID:17289874


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