Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

9141

Name

PDCD5

Synonymous

TFAR19;programmed cell death 5;PDCD5;programmed cell death 5

Definition

TF-1 cell apoptosis-related protein 19|TF1 cell apoptosis-related gene 19|TFAR19 novel apoptosis-related|programmed cell death protein 5

Position

19q13.11

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

pdcd5(h) + Tip60(m.s.) <==> pdcd5(h):Tip60(m.s.) (binding)
pdcd5(h) --> p53(h){aceK120} (increase of acetylation)
PDCD5(h) --> pdcd5(h) (expression).
pdcd5(h) + Tip60(h) <==> pdcd5(h):Tip60(h) (binding)
pdcd5(h) --> Tip60(h) (increase of abundance)
pdcd5(h) --> Bax(h) (increase of abundance)
pdcd5(h) + EF1G(h) <==> pdcd5(h):EF1G(h) (binding)
pdcd5(h) + utp14A(h) <==> pdcd5(h):utp14A(h) (binding)
pdcd5(h) + RIF1(h) <==> pdcd5(h):RIF1(h) (binding)
PDCD5(h) --> pdcd5(h) (expression).
Tip60(h) --> pdcd5(h) (increase of abundance)

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

119Phosphoserine.Swiss-Prot 53.0
118Phosphoserine15302935;17081983Phospho.ELM 6.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr19

Promoter: 37762444 - 37764444Agilent_014791

chr19

Promoter: 37762444 - 37764444GSE27584

chr19

Promoter: 37762444 - 37764444Agilent_014791_44K


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