Bioinformatics and Systems Medicine Laboratory
General information | Expression | Regulation | Mutation | Interaction

Basic Information

Gene ID

54464

Name

XRN1

Synonymous

SEP1;5'-3' exoribonuclease 1;XRN1;5'-3' exoribonuclease 1

Definition

strand-exchange protein 1 homolog

Position

3q23

Gene Type

protein-coding

Gene Regulation:

Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Transcription Factors

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Regulation From TransFac database

XRN1(h) --> Xrn1-isoform1(h) (expression).
SMIF(h) + Xrn1(h) <==> SMIF(h):Xrn1(h) (binding)
Dom3(h) + Xrn1(h) <==> Dom3(h):Xrn1(h) (binding)
Ski2(h) + Xrn1(h) <==> Ski2(h):Xrn1(h) (binding)
Rrp6(h) + Xrn1(h) <==> Rrp6(h):Xrn1(h) (binding)
Oip2(h) + Xrn1(h) <==> Oip2(h):Xrn1(h) (binding)
XRN1(h) --> Xrn1(h) (expression).
XRN1(h) --> Xrn1-isoform2(h) (expression).
XRN1(h) --> Xrn1-isoform3(h) (expression).

Post Transcriptional Modification From dbPTM

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Location (AA)

PTM type

Literature

Database

1173Phosphoserine.Swiss-Prot 53.0
1176Phosphoserine.Swiss-Prot 53.0
1173Phosphoserine17081983Phospho.ELM 6.0
1176Phosphoserine17081983Phospho.ELM 6.0

Methylation Profile From DiseaseMeth database

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Chromosome

Location

Source

chr3

Promoter: 143649043 - 143651043Agilent_014791

chr3

Promoter: 143649043 - 143651043GSE27584

chr3

Promoter: 143649043 - 143651043GSE27584

chr3

Promoter: 143649043 - 143651043Agilent_014791_44K


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