Bioinformatics and Systems Medicine Laboratory
General information | Expression | Regulation | Mutation | Interaction

Basic Information

Gene ID

6711

Name

SPTBN1

Synonymous

ELF|SPTB2|betaSpII;spectrin, beta, non-erythrocytic 1;SPTBN1;spectrin, beta, non-erythrocytic 1

Definition

beta-G spectrin|beta-II spectrin|beta-fodrin|beta-spectrin 2|beta-spectrin II|embryonic liver beta-fodrin|fodrin beta chain|spectrin beta chain, brain 1|spectrin, non-erythroid beta chain 1

Position

2p21

Gene Type

protein-coding

Gene Regulation:

Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Transcription Factors

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Regulation From TransFac database

SPTBN1(h) --> beta2-spectrin-L(h) (expression).
beta2-spectrin(h) + sumo1(h) --> beta2-spectrin(h){sumo} (sumoylation)
beta2-spectrin(h) + lamin B(h) + actin(h) + vimentin(h) + plectin(h) <==> beta2-spectrin(h):lamin B(h):actin(h):vimentin(h):plectin(h) (binding)
plectin(h) + moesin(h) + beta2-spectrin(h) + actin(h) + vimentin(h) <==> plectin(h):moesin(h):beta2-spectrin(h):actin(h):vimentin(h) (binding)
vimentin(h) + actin(h) + beta2-spectrin(h) + plectin(h) <==> vimentin(h):actin(h):beta2-spectrin(h):plectin(h) (binding)
SPTBN1(h) --> beta2-spectrin(h) (expression).
SPTBN1(h) --> beta2-spectrin-S(h) (expression).

Post Transcriptional Modification From dbPTM

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Location (AA)

PTM type

Literature

Database

999Phosphothreonine (By similarity).Swiss-Prot 53.0
1918Phosphoserine (By similarity).Swiss-Prot 53.0
2102Phosphoserine.Swiss-Prot 53.0
2115Phosphoserine (By similarity).Swiss-Prot 53.0
2128Phosphoserine.Swiss-Prot 53.0
2138Phosphoserine.Swiss-Prot 53.0
2165Phosphoserine.Swiss-Prot 53.0
2169Phosphoserine.Swiss-Prot 53.0
2195Phosphothreonine (By similarity).Swiss-Prot 53.0
2324O-linked (GlcNAc) (By similarity).Swiss-Prot 53.0
2138Phosphoserine15302935;17081983Phospho.ELM 6.0
2165Phosphoserine15302935;16083285;17081983Phospho.ELM 6.0
2102Phosphoserine16083285;17081983Phospho.ELM 6.0
2169Phosphoserine15302935Phospho.ELM 6.0
2128Phosphoserine15302935;17081983Phospho.ELM 6.0
2161Phosphoserine17081983Phospho.ELM 6.0
2164Phosphoserine17081983Phospho.ELM 6.0
2320Phosphothreonine17081983Phospho.ELM 6.0

Methylation Profile From DiseaseMeth database

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Chromosome

Location

Source

chr2

Promoter: 54637535 - 54639535Agilent_014791

chr2

Promoter: 54637535 - 54639535GSE27584

chr2

Promoter: 54535458 - 54537458GSE27584


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