Bioinformatics and Systems Medicine Laboratory
General information | Expression | Regulation | Mutation | Interaction

Basic Information

Gene ID

7040

Name

TGFB1

Synonymous

CED|DPD1|LAP|TGFB|TGFbeta;transforming growth factor, beta 1;TGFB1;transforming growth factor, beta 1

Definition

TGF-beta 1 protein|TGF-beta-1|latency-associated peptide|transforming growth factor beta-1

Position

19q13.2|19q13.1

Gene Type

protein-coding

Gene Regulation:

Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Transcription Factors

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Regulation From TransFac database

TGFbeta1(h) + TGFbetaR-II(h) + TGFbetaR-I(h) <==> TGFbeta1(h):TGFbetaR-II(h):TGFbetaR-I(h) (binding)
TGFbeta1(h) --> Smad2-L(h) (activation; phosphorylation)
TGFbeta1(h) --> Smad2(mo) (activation; phosphorylation)
TGFbeta1(h) + TGFbetaR-II(pg) + TGFbetaR-I(h) <==> TGFbeta1(h):TGFbetaR-II(pg):TGFbetaR-I(h) (binding)
TGFbeta1(h) + LAP(h) <==> TGFbeta1(h):LAP(h) (binding)
TGFbeta1(h) + TGFbetaR-II(mv) + TGFbetaR-I(mv) <==> TGFbeta1(h):TGFbetaR-II(mv):TGFbetaR-I(mv) (binding)
TGFbeta1(h) + TGFbetaR-II(pg) + TGFbetaR-I(pg) <==> TGFbeta1(h):TGFbetaR-II(pg):TGFbetaR-I(pg) (binding)
TGFbeta1(h) + TGFbetaR-III(h) + TGFbetaR-II(h) <==> TGFbeta1(h):TGFbetaR-III(h):TGFbetaR-II(h) (binding)
TGFbeta1(h) + LAP1(h) + beta1-integrin(h) <==> TGFbeta1(h):LAP1(h):beta1-integrin(h) (binding)
heparin + TGFbeta1(h) <==> heparin:TGFbeta1(h) (binding)
HSPGs(r) + TGFbeta1(h) <==> HSPGs(r):TGFbeta1(h) (binding)
TGFbeta1(h) + TGFbetaR-II(h) <==> TGFbeta1(h):TGFbetaR-II(h) (binding)
LAP1(h) + TGFbeta1(h) <==> LAP1(h):TGFbeta1(h) (binding)
TGFbeta1(h) + TGFbetaR-III(h) <==> TGFbeta1(h):TGFbetaR-III(h) (binding)
TGFbeta1(h) --> Fos(r) (transactivation)
TGFbeta1(h) --> S100A11(h) (transactivation)
TGFbeta1(h) --> CDKN1A(h) (transactivation)
TGFbeta1(h) --> ERK(m){p} (increase of phosphorylation)
TGFbeta1(h) --> RSK1(m){p} (increase of phosphorylation)
TGFbeta1(h) --> bad(m){pS112} (increase of phosphorylation)
TGFbeta1(h) --/ bad(m) (decrease of abundance)
TGFbeta1(h) --> FLT3(h) (decrease of abundance)
TGFbeta1(h) --> Dab2(m):TAK1(m) (increase of binding)
TGFbeta1(h) --/ E-cadherin(m) (decrease of abundance)
TGFbeta1(h) --/ beta-catenin(m) (decrease of abundance)
TGFB1(h) --> TGFbeta1(h) (expression).
IGFBP-2(h) --> TGFbeta1(h) (increase of abundance)
IL-1beta(h) --> TGFbeta1(h) (increase of secretion)
TNF-alpha(h) --> TGFbeta1(h) (increase of secretion)
IFNgamma(h) --> TGFbeta1(h) (increase of secretion)
TGFbeta1(h) --PACE(r)--> TGFbeta1-CTF(h) + LAP1(h) (cleavage)
TGFbeta1(h) --> p21Cip1(h) (increase of abundance)
TGFbeta1(h) --> c-Jun(h) (increase of abundance)
TGFbeta1(h) --> Smad2(h){p} (increase of phosphorylation)
TGFbeta1(h) --/ Cdc25A(h) (decrease of abundance)
TGFbeta1(h) --/ cdc25A(h) (transrepression)
TGFbeta1(h) --> Cdc25a(h){ub(n)} (increase of ubiquitination)
TGFbeta1(h) --> Cdc25A(h){pS82}{pS88} (increase of phosphorylation)
TGFbeta1(h) --> COL1A1(h) (transactivation)
TGFbeta1(h) --> COL1A2(h) (transactivation)
TGFbeta1(h) --> CTGF(h) (transactivation)
TGFbeta1(h) --> TIMP-1(h) (transactivation)
TGFbeta1(h) --/ MMP1(h) (transrepression)
TGFbeta1(h) --> fibronectin(h) (increase of abundance)
TGFbeta1(h) --> c-Ets-1(h){aceK} (increase of acetylation)
TGFbeta1(h) --> c-Ets-1(m.s.){aceK} (increase of acetylation)
TGFbeta1(h) --> Smad2(h){pS} (increase of phosphorylation)
TGFbeta1(h) --> Smad3(h){pS} (increase of phosphorylation)
TGFbeta1(h) --> collagen-I(h) (increase of abundance)
TGFbeta1(h) --> collagen-III(h) (increase of abundance)
TGFbeta1(h) --> c-Ets-1(h){aceK}:p300(h) (increase of abundance)
TGFbeta1(h) --> p300(h):Smad3(h) (increase of abundance)
TGFbeta1(h) --> PIAS4(h) (transactivation)
TGFbeta1(h) --> SERPINE1(h) (transactivation)
TGFbeta1(h) --> alpha-actin-2(h) (increase of abundance)
TGFbeta1(h) --> alpha-actin-2(r) (increase of abundance)
TGFbeta1(h) --> Smad2(r){p} (increase of phosphorylation)
TGFbeta1(h) --> Smad4(r):TGIF(r) (increase of binding)
TGFbeta1(h) --/ SP-B(h) (transrepression)
TGFbeta1(h) --> Smad2(h){aceK} (increase of acetylation)
TGFbeta1(h) --> pRb(h){p} (decrease of phosphorylation)
TGFbeta1(h) --> CDKN2B(h) (transactivation)
TGFbeta1(h) --> p27Kip1(h) (increase of abundance)
TGFbeta1(h) --> p15INK4b(r) (increase of abundance)
TGFbeta1(h) --> p15INK4b(h) (increase of abundance)
TGFbeta1(h) --/ Cdk2(r) (decrease of abundance)
TGFbeta1(h) --/ Cdk2(h) (decrease of abundance)
TGFbeta1(h) --> pRb(r){p} (decrease of phosphorylation)
TGFbeta1(h) --> VEGFA(h) (transactivation)
TGFbeta1(h) --/ cyclinD1(m) (decrease of abundance)
TGFbeta1(h) --> CBP(m.s.):STAT5(m.s.) (decrease of binding)
TGFbeta1(h) --> SMAD7(r) (transactivation)
TGFbeta1(h) --> IL-11(h) (increase of secretion)
TGFbeta1(h) --> IL11(h) (transactivation)
TGFbeta1(h) --/ PTEN(m) (decrease of abundance)
TGFbeta1(h) --> AKT-1(m){pS473} (increase of phosphorylation)
TGFbeta1(h) --/ Tyrp1(m) (decrease of abundance)
TGFbeta1(h) --/ tyrosinase(m) (decrease of abundance)
TGFbeta1(h) --/ Tyr(m) (transrepression)
TGFbeta1(h) --> SNA(m) (increase of abundance)
TGFbeta1(h) --/ E-cadherin(m) (decrease of abundance)
TGFB1(h) --> TGFbeta1(h) (expression).

Post Transcriptional Modification From dbPTM

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Location (AA)

PTM type

Literature

Database

82N-linked (GlcNAc...).Swiss-Prot 53.0
136N-linked (GlcNAc...) (By similarity).Swiss-Prot 53.0
176N-linked (GlcNAc...) (By similarity).Swiss-Prot 53.0

Methylation Profile From DiseaseMeth database

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Chromosome

Location

Source

chr19

Promoter: 46551156 - 46553156Agilent_014791

chr19

Promoter: 46551156 - 46553156GoldenGate_Methylation_Cancer_Panel_I

chr19

Promoter: 46551156 - 46553156GSE27584

chr19

Promoter: 46551156 - 46553156Agilent_014791_44K


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