Bioinformatics and Systems Medicine Laboratory
General information | Expression | Regulation | Mutation | Interaction

Basic Information

Gene ID

8289

Name

ARID1A

Synonymous

B120|BAF250|BAF250a|BM029|C1orf4|ELD|OSA1|P270|SMARCF1|hELD|hOSA1;AT rich interactive domain 1A (SWI-like);ARID1A;AT rich interactive domain 1A (SWI-like)

Definition

ARID domain-containing protein 1A|AT-rich interactive domain-containing protein 1A|BRG1-associated factor 250a|OSA1 nuclear protein|SWI-like protein|SWI/SNF complex protein p270|SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin su

Position

1p35.3

Gene Type

protein-coding

Gene Regulation:

Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Transcription Factors

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Regulation From TransFac database

ARID1A(h) --> BAF250-isoform1(h) (expression).
BRG1(h) + BAF250(h) <==> BRG1(h):BAF250(h) (binding)
Brm(h) + BAF250(h) <==> Brm(h):BAF250(h) (binding)
BRG1(h) + BAF250(h) <==> BRG1(h):BAF250(h) (binding)
BAF250(h) + ARID1B(h) <==> BAF250(h):ARID1B(h) (binding)
ARID1A(h) --> BAF250(h) (expression).
ARID1A(h) --> BAF250-isoform2(h) (expression).

Post Transcriptional Modification From dbPTM

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Location (AA)

PTM type

Literature

Database

363Phosphoserine.Swiss-Prot 53.0
696Phosphoserine.Swiss-Prot 53.0
772Phosphoserine.Swiss-Prot 53.0
1755Phosphoserine.Swiss-Prot 53.0
696Phosphoserine15302935Phospho.ELM 6.0
772Phosphoserine15302935Phospho.ELM 6.0
1755Phosphoserine15302935;17081983Phospho.ELM 6.0
363Phosphoserine17081983Phospho.ELM 6.0

Methylation Profile From DiseaseMeth database

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Chromosome

Location

Source

chr1

Promoter: 26893609 - 26895609Agilent_014791

chr1

Promoter: 26893609 - 26895609GSE27584

chr1

Promoter: 26893609 - 26895609GSE27584

chr1

Promoter: 26893609 - 26895609Agilent_014791_44K


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