Gene: SNAP25-AS1

100131208
-
SNAP25 antisense RNA 1
ncRNA
20p12.2
Ensembl:ENSG00000227906
NC_000020.11
SNP Mapped
1   ANCO-SNPs
AD
0   
NA (AD)  NA (ND)   (Frontal_Cortex)
3.662e-1 (AD)  4.527e-1 (ND)

ANCO-SNPs

SNP ID Position Alleles Trait Variation Type
rs6077681chr20:10173796 (GRCh38.p7)T>Calcohol dependenceSNV(Single Nucleotide Variation)

DNA Methylation

There is no related methylation information for this gene.

Gene Expression in Different Tissues

Temporal and Spatial Expressions (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes average value of the expressions.

Top Co-expressed Genes in Brain-Frontal Cortex (BA9) (GTEx v7)

Top 10 positively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
RAB9B0.847
NAA300.841
KRT2220.838
RAD10.837
AFF20.836
G3BP20.835
FRRS1L0.834
FAXC0.833
SLC4A100.832
CHM0.832

Top 10 negatively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
CHST14-0.478
CSAG1-0.474
HEY2-0.471
SYDE1-0.464
FLT3LG-0.459
MAGEA12-0.455
AGTRAP-0.449
RARRES2-0.446
COPZ2-0.445
SOD3-0.441

Drugs/Compounds

    There is no DrugBank record for this gene !

    There is no CTD record for this GENE !

GO/Pathway

GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
GO:0006617SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition-IEA-  
GO ID GO Term Qualifier Evidence PubMed
GO:0005786signal recognition particle, endoplasmic reticulum targeting-IEA-  
KEGG ID KEGG Term
Reactome ID Reactome Term Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

There is no Interaction data for this gene.

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID Title (Year) Author Journal