Gene: UBE2F-SCLY

100533179
-
UBE2F-SCLY readthrough (NMD candidate)
ncRNA
2q37.3
Ensembl:ENSG00000258984 Vega:OTTHUMG00000170602
NC_000002.12
SNP Mapped
61   ANCO-SNPs
AD
0   
NA (AD)  NA (ND)   (Frontal_Cortex)
7.622e-1 (AD)  5.727e-1 (ND)

ANCO-SNPs

SNP ID Position Alleles Trait Variation Type
rs13006807chr2:238099901 (GRCh38.p7)C>Talcohol dependenceSNV(Single Nucleotide Variation)
rs41264151chr2:238098994 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs62196004chr2:238097673 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs13033964chr2:238096945 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs7591078chr2:238096373 (GRCh38.p7)C>Galcohol dependenceSNV(Single Nucleotide Variation)
rs34049050chr2:238089940 (GRCh38.p7)A>Galcohol dependenceSNV(Single Nucleotide Variation)
rs2592583chr2:238087119 (GRCh38.p7)G>Talcohol dependenceSNV(Single Nucleotide Variation)
rs2248623chr2:238086187 (GRCh38.p7)T>Galcohol dependenceSNV(Single Nucleotide Variation)
rs2326009chr2:238085216 (GRCh38.p7)C>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs2248824chr2:238084463 (GRCh38.p7)T>Calcohol dependenceSNV(Single Nucleotide Variation)
rs2248825chr2:238084404 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs2278742chr2:238083155 (GRCh38.p7)C>Talcohol dependenceSNV(Single Nucleotide Variation)
rs2249067chr2:238082546 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs2249077chr2:238082344 (GRCh38.p7)T>Calcohol dependenceSNV(Single Nucleotide Variation)
rs4663836chr2:238078544 (GRCh38.p7)A>Talcohol dependenceSNV(Single Nucleotide Variation)
rs2262426chr2:238075856 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs2262425chr2:238075488 (GRCh38.p7)A>Galcohol dependenceSNV(Single Nucleotide Variation)
rs2252822chr2:238074626 (GRCh38.p7)A>Galcohol dependenceSNV(Single Nucleotide Variation)
rs7601010chr2:238074132 (GRCh38.p7)C>Talcohol dependenceSNV(Single Nucleotide Variation)
rs2264166chr2:238072660 (GRCh38.p7)C>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs2592585chr2:238070980 (GRCh38.p7)C>Talcohol dependenceSNV(Single Nucleotide Variation)
rs2249543chr2:238066170 (GRCh38.p7)A>Galcohol dependenceSNV(Single Nucleotide Variation)
rs821480chr2:238064186 (GRCh38.p7)T>Calcohol dependenceSNV(Single Nucleotide Variation)
rs821482chr2:238062470 (GRCh38.p7)T>Calcohol dependenceSNV(Single Nucleotide Variation)
rs2250038chr2:238062302 (GRCh38.p7)G>Talcohol dependenceSNV(Single Nucleotide Variation)
rs2250039chr2:238062296 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs2250045chr2:238062221 (GRCh38.p7)C>Talcohol dependenceSNV(Single Nucleotide Variation)
rs2243545chr2:238060509 (GRCh38.p7)C>Talcohol dependenceSNV(Single Nucleotide Variation)
rs1374479chr2:238059384 (GRCh38.p7)C>Galcohol dependenceSNV(Single Nucleotide Variation)
rs821484chr2:238059011 (GRCh38.p7)A>Talcohol dependenceSNV(Single Nucleotide Variation)
rs843975chr2:238058924 (GRCh38.p7)A>Calcohol dependenceSNV(Single Nucleotide Variation)
rs821485chr2:238058166 (GRCh38.p7)A>Galcohol dependenceSNV(Single Nucleotide Variation)
rs821486chr2:238058050 (GRCh38.p7)T>Calcohol dependenceSNV(Single Nucleotide Variation)
rs2264165chr2:238057407 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs865380chr2:238055357 (GRCh38.p7)C>Galcohol dependenceSNV(Single Nucleotide Variation)
rs821488chr2:238055115 (GRCh38.p7)T>Calcohol dependenceSNV(Single Nucleotide Variation)
rs821490chr2:238051931 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs6431570chr2:238015926 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs7594965chr2:238002459 (GRCh38.p7)C>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs10166061chr2:237997869 (GRCh38.p7)C>Talcohol dependenceSNV(Single Nucleotide Variation)
rs10469607chr2:237996150 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs10203101chr2:237994668 (GRCh38.p7)C>Talcohol dependenceSNV(Single Nucleotide Variation)
rs4663276chr2:237990167 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs10048643chr2:237989292 (GRCh38.p7)A>Galcohol dependenceSNV(Single Nucleotide Variation)
rs10048814chr2:237989113 (GRCh38.p7)C>Talcohol dependenceSNV(Single Nucleotide Variation)
rs11692068chr2:237988964 (GRCh38.p7)C>Talcohol dependenceSNV(Single Nucleotide Variation)
rs11692064chr2:237988945 (GRCh38.p7)C>Galcohol dependenceSNV(Single Nucleotide Variation)
rs4663819chr2:237988732 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs11690668chr2:237988316 (GRCh38.p7)C>Talcohol dependenceSNV(Single Nucleotide Variation)
rs6755573chr2:237986970 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs7422865chr2:237984050 (GRCh38.p7)T>Calcohol dependenceSNV(Single Nucleotide Variation)
rs6726393chr2:237982949 (GRCh38.p7)A>Galcohol dependenceSNV(Single Nucleotide Variation)
rs7572717chr2:237981674 (GRCh38.p7)T>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs10187736chr2:237978933 (GRCh38.p7)C>Talcohol dependenceSNV(Single Nucleotide Variation)
rs2121472chr2:237976195 (GRCh38.p7)C>Talcohol dependenceSNV(Single Nucleotide Variation)
rs4461215chr2:237975324 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs6754093chr2:237974093 (GRCh38.p7)C>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs6711485chr2:237974033 (GRCh38.p7)A>Galcohol dependenceSNV(Single Nucleotide Variation)
rs7567199chr2:237971888 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs10929255chr2:237970660 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)
rs1446924chr2:237969098 (GRCh38.p7)A>Galcohol dependenceSNV(Single Nucleotide Variation)

DNA Methylation

There is no related methylation information for this gene.

Temporal and Spatial Expressions (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes average value of the expressions.

Drugs/Compounds

    There is no DrugBank record for this gene !

    There is no CTD record for this GENE !

GO/Pathway

GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
KEGG ID KEGG Term
Reactome ID Reactome Term Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID Title (Year) Author Journal