Gene: ANKRD18CP

101926917
-
ankyrin repeat domain 18C, pseudogene
pseudo
9q22.33
Ensembl:ENSG00000159712
NC_000009.12
SNP Mapped
1   ANCO-SNPs
AD
0   
9.148e-1 (AD)  7.218e-1 (ND)   (Frontal_Cortex)
NA (AD)  NA (ND)

ANCO-SNPs

SNP ID Position Alleles Trait Variation Type
rs10980992chr9:97183759 (GRCh38.p7)C>Talcohol dependenceSNV(Single Nucleotide Variation)

DNA Methylation

There is no related methylation information for this gene.

Gene Expression in Different Tissues

Temporal and Spatial Expressions (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes average value of the expressions.

Top Co-expressed Genes in Brain-Frontal Cortex (BA9) (GTEx v7)

Top 10 positively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
TARBP10.735
ANKRD36C0.726
LAMB10.706
CSMD10.706
ARMCX40.706
EML60.699
GRIK20.694
ICA1L0.693
TRANK10.687
NEK100.686

Top 10 negatively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
CCDC102A-0.48
ROM1-0.447
PGF-0.442
EIF4EBP1-0.44
RAB13-0.434
TSPO-0.415
HEBP2-0.414
ORAI1-0.41
SPINK8-0.409
CNN2-0.4

Drugs/Compounds

    There is no DrugBank record for this gene !

    There is no CTD record for this GENE !

GO/Pathway

GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
KEGG ID KEGG Term
Reactome ID Reactome Term Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

There is no Interaction data for this gene.

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID Title (Year) Author Journal