Gene: SAP30L-AS1

386627
GALNT10-AS1
SAP30L antisense RNA 1 (head to head)
ncRNA
5q33.2
Ensembl:ENSG00000245275
NC_000005.10
SNP Mapped
1   ANCO-SNPs
AD
0   
NA (AD)  NA (ND)   (Frontal_Cortex)
8.647e-1 (AD)  2.483e-1 (ND)

ANCO-SNPs

SNP ID Position Alleles Trait Variation Type
rs10037670chr5:154431930 (GRCh38.p7)A>Galcohol dependenceSNV(Single Nucleotide Variation)

DNA Methylation

There is no related methylation information for this gene.

Gene Expression in Different Tissues

Temporal and Spatial Expressions (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes average value of the expressions.

Top Co-expressed Genes in Brain-Frontal Cortex (BA9) (GTEx v7)

Top 10 positively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
KDM5A0.591
PHC30.585
SPATA50.58
ALMS10.578
PCDHGB30.567
NFATC30.555
ZNF2340.553
ZNF2640.546
CD1600.546
RAET1E0.541

Top 10 negatively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
CRH-0.328
TMEM253-0.317
SPEF1-0.29
BHLHA9-0.283
PARD6A-0.276
PRTN3-0.272
GSG1-0.266
CORT-0.264
ADRA2C-0.259
GGN-0.255

Drugs/Compounds

    There is no DrugBank record for this gene !

ID Drug Name Action PubMed
C018475butyraldehydebutyraldehyde results in decreased expression of SAP30L-AS1 mRNA26079696
D002945Cisplatin[Cisplatin co-treated with jinfukang] results in decreased expression of SAP30L-AS1 mRNA27392435
C118739entinostatentinostat results in increased expression of SAP30L-AS1 mRNA27188386
C544151jinfukang[Cisplatin co-treated with jinfukang] results in decreased expression of SAP30L-AS1 mRNA27392435
C561695(+)-JQ1 compound(+)-JQ1 compound results in increased expression of SAP30L-AS1 mRNA22904298|2675264

GO/Pathway

GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
KEGG ID KEGG Term
Reactome ID Reactome Term Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

There is no Interaction data for this gene.

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID Title (Year) Author Journal