DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
DDEDFYTTFP
Uniprot ID:
P58401
Source protein:
Neurexin-2-beta
Source gene:
NRXN2
Class:
CBL_PTK
Location:
463:472
E3 ligase:
CBL
DEGRON score:
0.9783
ASA_SCORE:
79.64
COIL:
0.7574
CONS_SCORE:
0.4078
DSS_SCORE:
0.52
HELIX:
0.1138
FCONS_SCORE:
1.0475
RIG_SCORE:
0.7954
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L463M
TCGA-AX-A1CE
UCEC
TCGA
DDEDFYTTFP
CBL_PTK
0.711
p.K457N
TCGA-BF-A1PZ
SKCM
TCGA
DDEDFYTTFP
CBL_PTK
0.1667
p.L468M
TCGA-CM-4743
COAD
TCGA
DDEDFYTTFP
CBL_PTK
0.711
p.Q479H
TCGA-EE-A29Q
SKCM
TCGA
DDEDFYTTFP
CBL_PTK
0.1389
p.R467C
TCGA-LN-A49W
ESCA
TCGA
DDEDFYTTFP
CBL_PTK
0.8301
p.R467C
TCGA-QG-A5Z2
COAD
TCGA
DDEDFYTTFP
CBL_PTK
0.8301
p.R477H
DO219024
BLCA
ICGC
DDEDFYTTFP
CBL_PTK
0.1944
p.R477H
DO224740
PACA
ICGC
DDEDFYTTFP
CBL_PTK
0.1944
p.P476T
DO219008
BLCA
ICGC
DDEDFYTTFP
CBL_PTK
0.2222
p.R477C
DO224645
COCA
ICGC
DDEDFYTTFP
CBL_PTK
0.1944
p.R454C
DO234297
ESAD
ICGC
DDEDFYTTFP
CBL_PTK
0.0833
p.A459D
DO45517
LUSC
ICGC
DDEDFYTTFP
CBL_PTK
0.2222
p.R477S
DO27192
LUSC
ICGC
DDEDFYTTFP
CBL_PTK
0.1944
p.A474V
DO42312
UCEC
ICGC
DDEDFYTTFP
CBL_PTK
0.2778
p.A474V
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
DDEDFYTTFP
CBL_PTK
0.2778
p.E456K
DO41235
UCEC
ICGC
DDEDFYTTFP
CBL_PTK
0.1389
p.R482C
DO41235
UCEC
ICGC
DDEDFYTTFP
CBL_PTK
0.0556
p.L482F
SIDM00244
Neuroblastoma
GDSC
DDEDFYTTFP
CBL_PTK
0.0556
p.L482F
ACH-002083
Neuroblastoma
CCLE
DDEDFYTTFP
CBL_PTK
0.0556
p.L482F
NB69
autonomic_ganglia
COSMIC
DDEDFYTTFP
CBL_PTK
0.0556
p.L475F
NB69
autonomic_ganglia
COSMIC
DDEDFYTTFP
CBL_PTK
0.25
p.V482A
LIM1215
large_intestine
COSMIC
DDEDFYTTFP
CBL_PTK
0.0556
p.T465N
NCI-H650
lung
COSMIC
DDEDFYTTFP
CBL_PTK
0.7055
p.V458A
LIM1215
large_intestine
COSMIC
DDEDFYTTFP
CBL_PTK
0.1944
Drug responses associated with NRXN2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DDEDFYTTFP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P58401
Neurexin-2-beta
CBL_PTK
463:472
DDEDFYTTFP
CBL
0.9783
More...
Q9P2S2
Neurexin-2
CBL_PTK
1509:1518
DDEDFYTTFP
CBL
0.9918
More...