DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
DSGGSKT
Uniprot ID:
Q9NV66
Source protein:
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
Source gene:
TYW1
Class:
DEG_SCF_TRCP1_1
Location:
684:690
E3 ligase:
BTRC
DEGRON score:
0.7036
ASA_SCORE:
81.4429
COIL:
0.8099
CONS_SCORE:
0.2969
DSS_SCORE:
0.2976
HELIX:
0.1697
FCONS_SCORE:
0.6126
RIG_SCORE:
0.7036
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K694R
TCGA-33-4586
LUSC
TCGA
DSGGSKT
DEG_SCF_TRCP1_1
0.6667
p.K694R
DO27318
LUSC
ICGC
DSGGSKT
DEG_SCF_TRCP1_1
0.6667
p.S692C
TCGA-44-8117
LUAD
TCGA
DSGGSKT
DEG_SCF_TRCP1_1
0.7222
p.S692C
DO24028
LUAD
ICGC
DSGGSKT
DEG_SCF_TRCP1_1
0.7222
p.D695N
TCGA-A5-A0G2
UCEC
TCGA
DSGGSKT
DEG_SCF_TRCP1_1
0.1944
p.D695N
DO41235
UCEC
ICGC
DSGGSKT
DEG_SCF_TRCP1_1
0.1944
p.L678I
TCGA-AA-3966
COAD
TCGA
DSGGSKT
DEG_SCF_TRCP1_1
0.1667
p.L678I
DO10068
COAD
ICGC
DSGGSKT
DEG_SCF_TRCP1_1
0.1667
p.F691C
TCGA-AO-A0J8
BRCA
TCGA
DSGGSKT
DEG_SCF_TRCP1_1
0.3056
p.F691C
DO2909
BRCA
ICGC
DSGGSKT
DEG_SCF_TRCP1_1
0.3056
p.A693T
TCGA-AP-A056
UCEC
TCGA
DSGGSKT
DEG_SCF_TRCP1_1
0.25
p.A693T
DO43971
UCEC
ICGC
DSGGSKT
DEG_SCF_TRCP1_1
0.25
p.R674H
TCGA-AP-A059
UCEC
TCGA
DSGGSKT
DEG_SCF_TRCP1_1
0.0556
p.R674H
DO41361
UCEC
ICGC
DSGGSKT
DEG_SCF_TRCP1_1
0.0556
p.E681D
TCGA-CA-6717
COAD
TCGA
DSGGSKT
DEG_SCF_TRCP1_1
0.25
p.E681D
DO8264
COAD
ICGC
DSGGSKT
DEG_SCF_TRCP1_1
0.25
p.S692N
TCGA-HU-A4GT
STAD
TCGA
DSGGSKT
DEG_SCF_TRCP1_1
0.7222
p.S692N
DO48020
STAD
ICGC
DSGGSKT
DEG_SCF_TRCP1_1
0.7222
p.S692N
SIDM01169
Ovarian Carcinoma
GDSC
DSGGSKT
DEG_SCF_TRCP1_1
0.7222
p.S692N
ACH-000885
Ovarian Cancer
CCLE
DSGGSKT
DEG_SCF_TRCP1_1
0.7222
p.S692N
TOV-21G
ovary
COSMIC
DSGGSKT
DEG_SCF_TRCP1_1
0.7222
p.G686C
TCGA-SJ-A6ZI
UCEC
TCGA
DSGGSKT
DEG_SCF_TRCP1_1
0.76
p.G686C
DO219784
UCEC
ICGC
DSGGSKT
DEG_SCF_TRCP1_1
0.76
p.A698T
DO232224
PBCA
ICGC
DSGGSKT
DEG_SCF_TRCP1_1
0.1111
p.D684G
SIDM00957
Colorectal Carcinoma
GDSC
DSGGSKT
DEG_SCF_TRCP1_1
0.7198
p.D684G
ACH-000350
Colon/Colorectal Cancer
CCLE
DSGGSKT
DEG_SCF_TRCP1_1
0.7198
p.D684G
COLO-678
large_intestine
COSMIC
DSGGSKT
DEG_SCF_TRCP1_1
0.7198
p.T700I
SIDM00177
Melanoma
GDSC
DSGGSKT
DEG_SCF_TRCP1_1
0.0556
Drug responses associated with TYW1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGGSKT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6NUM6
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1B
DEG_SCF_TRCP1_1
620:626
DSGGSKT
BTRC
0.7036
More...
Q9NV66
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
DEG_SCF_TRCP1_1
684:690
DSGGSKT
BTRC
0.7036
More...