DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGSTS
Uniprot ID:
Q96S94
Source protein:
Cyclin-L2
Source gene:
CCNL2
Class:
DEG_SCF_TRCP1_1
Location:
407:412
E3 ligase:
BTRC
DEGRON score:
0.9802
ASA_SCORE:
89.1333
COIL:
0.9752
CONS_SCORE:
0.2777
DSS_SCORE:
0.8394
HELIX:
0.0162
FCONS_SCORE:
1.0085
RIG_SCORE:
0.414
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R422W
TCGA-AN-A0G0
BRCA
TCGA
DSGSTS
DEG_SCF_TRCP1_1
0.0556
p.G413S
TCGA-AZ-6601
COAD
TCGA
DSGSTS
DEG_SCF_TRCP1_1
0.3056
p.R422Q
SIDM00217
Colorectal Carcinoma
GDSC
DSGSTS
DEG_SCF_TRCP1_1
0.0556
p.R422Q
ACH-000999
Colon/Colorectal Cancer
CCLE
DSGSTS
DEG_SCF_TRCP1_1
0.0556
p.R422Q
SNU-1040
large_intestine
COSMIC
DSGSTS
DEG_SCF_TRCP1_1
0.0556
Drug responses associated with CCNL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15464
SH2 domain-containing adapter protein B
DEG_SCF_TRCP1_1
73:78
DSGSTS
BTRC
0.8506
More...
Q96S94
Cyclin-L2
DEG_SCF_TRCP1_1
407:412
DSGSTS
BTRC
0.9802
More...