DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGTQT
Uniprot ID:
Q76G19
Source protein:
PDZ domain-containing protein 4
Source gene:
PDZD4
Class:
DEG_SCF_TRCP1_1
Location:
69:74
E3 ligase:
BTRC
DEGRON score:
0.9904
ASA_SCORE:
84.5833
COIL:
0.9147
CONS_SCORE:
0.4837
DSS_SCORE:
0.3675
HELIX:
0.046
FCONS_SCORE:
1.5404
RIG_SCORE:
0.7085
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I76T
TCGA-AP-A1DK
UCEC
TCGA
DSGTQT
DEG_SCF_TRCP1_1
0.2778
p.I76T
DO42033
UCEC
ICGC
DSGTQT
DEG_SCF_TRCP1_1
0.2778
p.D75N
TCGA-AP-A1E0
UCEC
TCGA
DSGTQT
DEG_SCF_TRCP1_1
0.3056
p.D75N
DO43154
UCEC
ICGC
DSGTQT
DEG_SCF_TRCP1_1
0.3056
p.D75N
SIDM00118
Colorectal Carcinoma
GDSC
DSGTQT
DEG_SCF_TRCP1_1
0.3056
p.D75N
ACH-001081
Colon/Colorectal Cancer
CCLE
DSGTQT
DEG_SCF_TRCP1_1
0.3056
p.D75N
HCC2998
large_intestine
COSMIC
DSGTQT
DEG_SCF_TRCP1_1
0.3056
p.A83V
TCGA-BH-A18G
BRCA
TCGA
DSGTQT
DEG_SCF_TRCP1_1
0.0833
p.A83V
DO3686
BRCA
ICGC
DSGTQT
DEG_SCF_TRCP1_1
0.0833
p.A83V
DO228435
MALY
ICGC
DSGTQT
DEG_SCF_TRCP1_1
0.0833
p.D59E
TCGA-BH-A201
BRCA
TCGA
DSGTQT
DEG_SCF_TRCP1_1
0.0556
p.D59E
DO2192
BRCA
ICGC
DSGTQT
DEG_SCF_TRCP1_1
0.0556
p.E79K
TCGA-EB-A430
SKCM
TCGA
DSGTQT
DEG_SCF_TRCP1_1
0.1944
p.E79K
DO37906
SKCM
ICGC
DSGTQT
DEG_SCF_TRCP1_1
0.1944
p.Q73E
DO228471
BRCA
ICGC
DSGTQT
DEG_SCF_TRCP1_1
0.5633
p.D69G
SIDM01588
Endometrial Carcinoma
GDSC
DSGTQT
DEG_SCF_TRCP1_1
0.7198
p.D69G
ACH-000993
Endometrial/Uterine Cancer
CCLE
DSGTQT
DEG_SCF_TRCP1_1
0.7198
p.A60T
NUGC-3
stomach
COSMIC
DSGTQT
DEG_SCF_TRCP1_1
0.0833
Drug responses associated with PDZD4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGTQT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q76G19
PDZ domain-containing protein 4
DEG_SCF_TRCP1_1
69:74
DSGTQT
BTRC
0.9904
More...
Q8N1W2
Zinc finger protein 710
DEG_SCF_TRCP1_1
6:11
DSGTQT
BTRC
0.9124
More...